GO Enrichment Analysis of Co-expressed Genes with
AT3G49670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 2 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 3 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 4 | GO:0007172: signal complex assembly | 0.00E+00 |
| 5 | GO:1902395: regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity | 0.00E+00 |
| 6 | GO:0080127: fruit septum development | 0.00E+00 |
| 7 | GO:0061077: chaperone-mediated protein folding | 1.73E-07 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.33E-06 |
| 9 | GO:0006810: transport | 8.24E-05 |
| 10 | GO:0010028: xanthophyll cycle | 9.50E-05 |
| 11 | GO:0010450: inflorescence meristem growth | 9.50E-05 |
| 12 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 9.50E-05 |
| 13 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.50E-05 |
| 14 | GO:0015671: oxygen transport | 9.50E-05 |
| 15 | GO:0009773: photosynthetic electron transport in photosystem I | 1.41E-04 |
| 16 | GO:0016122: xanthophyll metabolic process | 2.24E-04 |
| 17 | GO:0006521: regulation of cellular amino acid metabolic process | 2.24E-04 |
| 18 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.00E-04 |
| 19 | GO:0007017: microtubule-based process | 3.32E-04 |
| 20 | GO:0045165: cell fate commitment | 3.73E-04 |
| 21 | GO:0048281: inflorescence morphogenesis | 3.73E-04 |
| 22 | GO:0080055: low-affinity nitrate transport | 3.73E-04 |
| 23 | GO:0010148: transpiration | 5.37E-04 |
| 24 | GO:0010306: rhamnogalacturonan II biosynthetic process | 5.37E-04 |
| 25 | GO:0019464: glycine decarboxylation via glycine cleavage system | 7.14E-04 |
| 26 | GO:0006109: regulation of carbohydrate metabolic process | 7.14E-04 |
| 27 | GO:0015994: chlorophyll metabolic process | 7.14E-04 |
| 28 | GO:0006546: glycine catabolic process | 7.14E-04 |
| 29 | GO:1902183: regulation of shoot apical meristem development | 9.02E-04 |
| 30 | GO:0010158: abaxial cell fate specification | 9.02E-04 |
| 31 | GO:0042549: photosystem II stabilization | 1.10E-03 |
| 32 | GO:0010190: cytochrome b6f complex assembly | 1.10E-03 |
| 33 | GO:0003006: developmental process involved in reproduction | 1.10E-03 |
| 34 | GO:0015995: chlorophyll biosynthetic process | 1.21E-03 |
| 35 | GO:0009735: response to cytokinin | 1.26E-03 |
| 36 | GO:0042026: protein refolding | 1.31E-03 |
| 37 | GO:0006458: 'de novo' protein folding | 1.31E-03 |
| 38 | GO:0010103: stomatal complex morphogenesis | 1.54E-03 |
| 39 | GO:0070370: cellular heat acclimation | 1.54E-03 |
| 40 | GO:0006353: DNA-templated transcription, termination | 1.78E-03 |
| 41 | GO:0006631: fatty acid metabolic process | 1.99E-03 |
| 42 | GO:0010093: specification of floral organ identity | 2.03E-03 |
| 43 | GO:0001558: regulation of cell growth | 2.03E-03 |
| 44 | GO:0080167: response to karrikin | 2.18E-03 |
| 45 | GO:0019432: triglyceride biosynthetic process | 2.29E-03 |
| 46 | GO:0048507: meristem development | 2.29E-03 |
| 47 | GO:2000024: regulation of leaf development | 2.29E-03 |
| 48 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.56E-03 |
| 49 | GO:0015979: photosynthesis | 2.57E-03 |
| 50 | GO:0048829: root cap development | 2.85E-03 |
| 51 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.85E-03 |
| 52 | GO:0006869: lipid transport | 3.07E-03 |
| 53 | GO:0010015: root morphogenesis | 3.14E-03 |
| 54 | GO:0043085: positive regulation of catalytic activity | 3.14E-03 |
| 55 | GO:0043086: negative regulation of catalytic activity | 3.41E-03 |
| 56 | GO:0010582: floral meristem determinacy | 3.44E-03 |
| 57 | GO:0009767: photosynthetic electron transport chain | 3.76E-03 |
| 58 | GO:0009934: regulation of meristem structural organization | 4.08E-03 |
| 59 | GO:0048467: gynoecium development | 4.08E-03 |
| 60 | GO:0009933: meristem structural organization | 4.08E-03 |
| 61 | GO:0010207: photosystem II assembly | 4.08E-03 |
| 62 | GO:0051302: regulation of cell division | 5.46E-03 |
| 63 | GO:0003333: amino acid transmembrane transport | 5.83E-03 |
| 64 | GO:0001944: vasculature development | 6.58E-03 |
| 65 | GO:0045490: pectin catabolic process | 7.06E-03 |
| 66 | GO:0048868: pollen tube development | 8.21E-03 |
| 67 | GO:0009960: endosperm development | 8.21E-03 |
| 68 | GO:0010154: fruit development | 8.21E-03 |
| 69 | GO:0006520: cellular amino acid metabolic process | 8.21E-03 |
| 70 | GO:0006662: glycerol ether metabolic process | 8.21E-03 |
| 71 | GO:0006457: protein folding | 1.02E-02 |
| 72 | GO:0071281: cellular response to iron ion | 1.04E-02 |
| 73 | GO:0009607: response to biotic stimulus | 1.28E-02 |
| 74 | GO:0009627: systemic acquired resistance | 1.33E-02 |
| 75 | GO:0016311: dephosphorylation | 1.43E-02 |
| 76 | GO:0006865: amino acid transport | 1.70E-02 |
| 77 | GO:0034599: cellular response to oxidative stress | 1.81E-02 |
| 78 | GO:0008152: metabolic process | 2.22E-02 |
| 79 | GO:0009965: leaf morphogenesis | 2.29E-02 |
| 80 | GO:0009664: plant-type cell wall organization | 2.47E-02 |
| 81 | GO:0009409: response to cold | 2.64E-02 |
| 82 | GO:0006857: oligopeptide transport | 2.73E-02 |
| 83 | GO:0009909: regulation of flower development | 2.80E-02 |
| 84 | GO:0006096: glycolytic process | 2.93E-02 |
| 85 | GO:0005975: carbohydrate metabolic process | 3.04E-02 |
| 86 | GO:0006633: fatty acid biosynthetic process | 4.61E-02 |
| 87 | GO:0006412: translation | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.22E-06 |
| 5 | GO:0005344: oxygen transporter activity | 9.50E-05 |
| 6 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 9.50E-05 |
| 7 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 9.50E-05 |
| 8 | GO:0044183: protein binding involved in protein folding | 1.41E-04 |
| 9 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.24E-04 |
| 10 | GO:0004857: enzyme inhibitor activity | 3.00E-04 |
| 11 | GO:0005528: FK506 binding | 3.00E-04 |
| 12 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 3.73E-04 |
| 13 | GO:0030570: pectate lyase activity | 4.36E-04 |
| 14 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.37E-04 |
| 15 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 5.37E-04 |
| 16 | GO:0016851: magnesium chelatase activity | 5.37E-04 |
| 17 | GO:0080032: methyl jasmonate esterase activity | 7.14E-04 |
| 18 | GO:0010328: auxin influx transmembrane transporter activity | 7.14E-04 |
| 19 | GO:0019199: transmembrane receptor protein kinase activity | 7.14E-04 |
| 20 | GO:0042277: peptide binding | 7.14E-04 |
| 21 | GO:0048038: quinone binding | 7.29E-04 |
| 22 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 9.02E-04 |
| 23 | GO:0005200: structural constituent of cytoskeleton | 9.27E-04 |
| 24 | GO:0080030: methyl indole-3-acetate esterase activity | 1.10E-03 |
| 25 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.31E-03 |
| 26 | GO:0003993: acid phosphatase activity | 1.75E-03 |
| 27 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.33E-03 |
| 28 | GO:0043621: protein self-association | 2.33E-03 |
| 29 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.51E-03 |
| 30 | GO:0008047: enzyme activator activity | 2.85E-03 |
| 31 | GO:0015020: glucuronosyltransferase activity | 2.85E-03 |
| 32 | GO:0004565: beta-galactosidase activity | 3.76E-03 |
| 33 | GO:0051082: unfolded protein binding | 4.10E-03 |
| 34 | GO:0019843: rRNA binding | 5.12E-03 |
| 35 | GO:0008289: lipid binding | 5.41E-03 |
| 36 | GO:0033612: receptor serine/threonine kinase binding | 5.83E-03 |
| 37 | GO:0047134: protein-disulfide reductase activity | 7.38E-03 |
| 38 | GO:0001085: RNA polymerase II transcription factor binding | 8.21E-03 |
| 39 | GO:0004791: thioredoxin-disulfide reductase activity | 8.63E-03 |
| 40 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.04E-02 |
| 41 | GO:0008483: transaminase activity | 1.14E-02 |
| 42 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.14E-02 |
| 43 | GO:0016597: amino acid binding | 1.18E-02 |
| 44 | GO:0003735: structural constituent of ribosome | 1.19E-02 |
| 45 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.65E-02 |
| 46 | GO:0004722: protein serine/threonine phosphatase activity | 1.79E-02 |
| 47 | GO:0003924: GTPase activity | 2.01E-02 |
| 48 | GO:0005215: transporter activity | 2.05E-02 |
| 49 | GO:0015293: symporter activity | 2.29E-02 |
| 50 | GO:0015171: amino acid transmembrane transporter activity | 2.80E-02 |
| 51 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.14E-02 |
| 52 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.14E-02 |
| 53 | GO:0004650: polygalacturonase activity | 3.14E-02 |
| 54 | GO:0015035: protein disulfide oxidoreductase activity | 3.42E-02 |
| 55 | GO:0016758: transferase activity, transferring hexosyl groups | 3.85E-02 |
| 56 | GO:0016829: lyase activity | 4.15E-02 |
| 57 | GO:0030170: pyridoxal phosphate binding | 4.23E-02 |
| 58 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.30E-02 |
| 59 | GO:0046872: metal ion binding | 4.45E-02 |
| 60 | GO:0046910: pectinesterase inhibitor activity | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.74E-11 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.72E-10 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.72E-07 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 3.24E-06 |
| 5 | GO:0030095: chloroplast photosystem II | 4.80E-06 |
| 6 | GO:0009570: chloroplast stroma | 1.04E-05 |
| 7 | GO:0009579: thylakoid | 5.44E-05 |
| 8 | GO:0009941: chloroplast envelope | 8.78E-05 |
| 9 | GO:0009344: nitrite reductase complex [NAD(P)H] | 9.50E-05 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 3.32E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 3.73E-04 |
| 12 | GO:0009534: chloroplast thylakoid | 3.78E-04 |
| 13 | GO:0015630: microtubule cytoskeleton | 5.37E-04 |
| 14 | GO:0005960: glycine cleavage complex | 5.37E-04 |
| 15 | GO:0019898: extrinsic component of membrane | 6.82E-04 |
| 16 | GO:0016272: prefoldin complex | 1.31E-03 |
| 17 | GO:0009538: photosystem I reaction center | 1.78E-03 |
| 18 | GO:0045298: tubulin complex | 2.29E-03 |
| 19 | GO:0042651: thylakoid membrane | 5.46E-03 |
| 20 | GO:0015935: small ribosomal subunit | 5.83E-03 |
| 21 | GO:0010319: stromule | 1.14E-02 |
| 22 | GO:0009295: nucleoid | 1.14E-02 |
| 23 | GO:0005874: microtubule | 1.31E-02 |
| 24 | GO:0005667: transcription factor complex | 1.33E-02 |
| 25 | GO:0015934: large ribosomal subunit | 1.65E-02 |
| 26 | GO:0000325: plant-type vacuole | 1.65E-02 |
| 27 | GO:0005840: ribosome | 1.91E-02 |
| 28 | GO:0031977: thylakoid lumen | 1.99E-02 |
| 29 | GO:0009505: plant-type cell wall | 2.40E-02 |
| 30 | GO:0048046: apoplast | 2.93E-02 |
| 31 | GO:0005834: heterotrimeric G-protein complex | 3.07E-02 |
| 32 | GO:0010287: plastoglobule | 3.78E-02 |
| 33 | GO:0005576: extracellular region | 4.71E-02 |