GO Enrichment Analysis of Co-expressed Genes with
AT3G49310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017012: protein-phytochromobilin linkage | 0.00E+00 |
| 2 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 3 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 4 | GO:0010202: response to low fluence red light stimulus | 0.00E+00 |
| 5 | GO:0006007: glucose catabolic process | 2.30E-05 |
| 6 | GO:0031468: nuclear envelope reassembly | 2.30E-05 |
| 7 | GO:0010617: circadian regulation of calcium ion oscillation | 5.89E-05 |
| 8 | GO:0019441: tryptophan catabolic process to kynurenine | 5.89E-05 |
| 9 | GO:0044419: interspecies interaction between organisms | 5.89E-05 |
| 10 | GO:0016255: attachment of GPI anchor to protein | 1.04E-04 |
| 11 | GO:0071492: cellular response to UV-A | 1.04E-04 |
| 12 | GO:0040009: regulation of growth rate | 1.04E-04 |
| 13 | GO:0009584: detection of visible light | 1.55E-04 |
| 14 | GO:0009399: nitrogen fixation | 1.55E-04 |
| 15 | GO:0010148: transpiration | 1.55E-04 |
| 16 | GO:0044205: 'de novo' UMP biosynthetic process | 2.12E-04 |
| 17 | GO:0006542: glutamine biosynthetic process | 2.12E-04 |
| 18 | GO:0009687: abscisic acid metabolic process | 2.12E-04 |
| 19 | GO:0071486: cellular response to high light intensity | 2.12E-04 |
| 20 | GO:0009765: photosynthesis, light harvesting | 2.12E-04 |
| 21 | GO:0006221: pyrimidine nucleotide biosynthetic process | 2.12E-04 |
| 22 | GO:0009649: entrainment of circadian clock | 2.12E-04 |
| 23 | GO:0009853: photorespiration | 2.87E-04 |
| 24 | GO:0009117: nucleotide metabolic process | 3.37E-04 |
| 25 | GO:0006751: glutathione catabolic process | 3.37E-04 |
| 26 | GO:0009926: auxin polar transport | 3.70E-04 |
| 27 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 4.04E-04 |
| 28 | GO:0010374: stomatal complex development | 4.74E-04 |
| 29 | GO:0010161: red light signaling pathway | 4.74E-04 |
| 30 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 4.74E-04 |
| 31 | GO:0006526: arginine biosynthetic process | 6.21E-04 |
| 32 | GO:0009638: phototropism | 7.77E-04 |
| 33 | GO:0006325: chromatin organization | 8.59E-04 |
| 34 | GO:0072593: reactive oxygen species metabolic process | 9.42E-04 |
| 35 | GO:2000028: regulation of photoperiodism, flowering | 1.12E-03 |
| 36 | GO:0050826: response to freezing | 1.12E-03 |
| 37 | GO:0009266: response to temperature stimulus | 1.20E-03 |
| 38 | GO:0007030: Golgi organization | 1.30E-03 |
| 39 | GO:0006487: protein N-linked glycosylation | 1.49E-03 |
| 40 | GO:0016226: iron-sulfur cluster assembly | 1.80E-03 |
| 41 | GO:0006012: galactose metabolic process | 1.91E-03 |
| 42 | GO:0080022: primary root development | 2.24E-03 |
| 43 | GO:0010118: stomatal movement | 2.24E-03 |
| 44 | GO:0061025: membrane fusion | 2.48E-03 |
| 45 | GO:0009630: gravitropism | 2.84E-03 |
| 46 | GO:1901657: glycosyl compound metabolic process | 2.96E-03 |
| 47 | GO:0010090: trichome morphogenesis | 2.96E-03 |
| 48 | GO:0010252: auxin homeostasis | 3.09E-03 |
| 49 | GO:0010286: heat acclimation | 3.22E-03 |
| 50 | GO:0008152: metabolic process | 3.54E-03 |
| 51 | GO:0010029: regulation of seed germination | 3.62E-03 |
| 52 | GO:0006974: cellular response to DNA damage stimulus | 3.75E-03 |
| 53 | GO:0042128: nitrate assimilation | 3.75E-03 |
| 54 | GO:0055114: oxidation-reduction process | 4.16E-03 |
| 55 | GO:0018298: protein-chromophore linkage | 4.17E-03 |
| 56 | GO:0008219: cell death | 4.17E-03 |
| 57 | GO:0010311: lateral root formation | 4.32E-03 |
| 58 | GO:0010218: response to far red light | 4.46E-03 |
| 59 | GO:0010043: response to zinc ion | 4.60E-03 |
| 60 | GO:0009867: jasmonic acid mediated signaling pathway | 4.90E-03 |
| 61 | GO:0009611: response to wounding | 5.80E-03 |
| 62 | GO:0009640: photomorphogenesis | 5.84E-03 |
| 63 | GO:0009965: leaf morphogenesis | 6.33E-03 |
| 64 | GO:0031347: regulation of defense response | 6.66E-03 |
| 65 | GO:0009585: red, far-red light phototransduction | 7.18E-03 |
| 66 | GO:0010224: response to UV-B | 7.35E-03 |
| 67 | GO:0009651: response to salt stress | 8.03E-03 |
| 68 | GO:0006096: glycolytic process | 8.06E-03 |
| 69 | GO:0048316: seed development | 8.24E-03 |
| 70 | GO:0016569: covalent chromatin modification | 8.79E-03 |
| 71 | GO:0051726: regulation of cell cycle | 9.56E-03 |
| 72 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.39E-02 |
| 73 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.46E-02 |
| 74 | GO:0009409: response to cold | 1.56E-02 |
| 75 | GO:0005975: carbohydrate metabolic process | 1.75E-02 |
| 76 | GO:0046686: response to cadmium ion | 1.79E-02 |
| 77 | GO:0009826: unidimensional cell growth | 1.79E-02 |
| 78 | GO:0044550: secondary metabolite biosynthetic process | 2.27E-02 |
| 79 | GO:0015979: photosynthesis | 2.35E-02 |
| 80 | GO:0045454: cell redox homeostasis | 2.43E-02 |
| 81 | GO:0045892: negative regulation of transcription, DNA-templated | 2.46E-02 |
| 82 | GO:0009737: response to abscisic acid | 2.46E-02 |
| 83 | GO:0006629: lipid metabolic process | 2.83E-02 |
| 84 | GO:0009408: response to heat | 2.83E-02 |
| 85 | GO:0006281: DNA repair | 2.83E-02 |
| 86 | GO:0048364: root development | 2.91E-02 |
| 87 | GO:0006508: proteolysis | 3.54E-02 |
| 88 | GO:0009734: auxin-activated signaling pathway | 3.61E-02 |
| 89 | GO:0009908: flower development | 3.96E-02 |
| 90 | GO:0009735: response to cytokinin | 3.99E-02 |
| 91 | GO:0009555: pollen development | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003992: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity | 0.00E+00 |
| 2 | GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity | 0.00E+00 |
| 3 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 4 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 5 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 6 | GO:0031517: red light photoreceptor activity | 0.00E+00 |
| 7 | GO:0004151: dihydroorotase activity | 0.00E+00 |
| 8 | GO:1990841: promoter-specific chromatin binding | 2.30E-05 |
| 9 | GO:0031516: far-red light photoreceptor activity | 2.30E-05 |
| 10 | GO:0046480: galactolipid galactosyltransferase activity | 2.30E-05 |
| 11 | GO:0080079: cellobiose glucosidase activity | 2.30E-05 |
| 12 | GO:0004089: carbonate dehydratase activity | 2.34E-05 |
| 13 | GO:0004061: arylformamidase activity | 5.89E-05 |
| 14 | GO:0009883: red or far-red light photoreceptor activity | 5.89E-05 |
| 15 | GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | 5.89E-05 |
| 16 | GO:0008020: G-protein coupled photoreceptor activity | 1.04E-04 |
| 17 | GO:0035529: NADH pyrophosphatase activity | 1.55E-04 |
| 18 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.55E-04 |
| 19 | GO:0004356: glutamate-ammonia ligase activity | 2.73E-04 |
| 20 | GO:0051117: ATPase binding | 3.37E-04 |
| 21 | GO:0004034: aldose 1-epimerase activity | 5.46E-04 |
| 22 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 6.98E-04 |
| 23 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 6.98E-04 |
| 24 | GO:0009672: auxin:proton symporter activity | 7.77E-04 |
| 25 | GO:0004673: protein histidine kinase activity | 8.59E-04 |
| 26 | GO:0008047: enzyme activator activity | 8.59E-04 |
| 27 | GO:0008378: galactosyltransferase activity | 1.03E-03 |
| 28 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.12E-03 |
| 29 | GO:0000155: phosphorelay sensor kinase activity | 1.12E-03 |
| 30 | GO:0010329: auxin efflux transmembrane transporter activity | 1.12E-03 |
| 31 | GO:0042802: identical protein binding | 1.47E-03 |
| 32 | GO:0043130: ubiquitin binding | 1.49E-03 |
| 33 | GO:0046872: metal ion binding | 1.74E-03 |
| 34 | GO:0016853: isomerase activity | 2.48E-03 |
| 35 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 2.72E-03 |
| 36 | GO:0016168: chlorophyll binding | 3.62E-03 |
| 37 | GO:0030247: polysaccharide binding | 3.89E-03 |
| 38 | GO:0008236: serine-type peptidase activity | 4.03E-03 |
| 39 | GO:0016787: hydrolase activity | 4.54E-03 |
| 40 | GO:0030145: manganese ion binding | 4.60E-03 |
| 41 | GO:0008422: beta-glucosidase activity | 5.21E-03 |
| 42 | GO:0051539: 4 iron, 4 sulfur cluster binding | 5.36E-03 |
| 43 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.16E-03 |
| 44 | GO:0008234: cysteine-type peptidase activity | 7.70E-03 |
| 45 | GO:0005507: copper ion binding | 8.07E-03 |
| 46 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 8.24E-03 |
| 47 | GO:0015035: protein disulfide oxidoreductase activity | 9.36E-03 |
| 48 | GO:0005509: calcium ion binding | 1.06E-02 |
| 49 | GO:0030170: pyridoxal phosphate binding | 1.16E-02 |
| 50 | GO:0043531: ADP binding | 1.96E-02 |
| 51 | GO:0042803: protein homodimerization activity | 2.52E-02 |
| 52 | GO:0004871: signal transducer activity | 2.52E-02 |
| 53 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.57E-02 |
| 54 | GO:0009055: electron carrier activity | 2.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005747: mitochondrial respiratory chain complex I | 5.81E-07 |
| 2 | GO:0045271: respiratory chain complex I | 4.55E-05 |
| 3 | GO:0042765: GPI-anchor transamidase complex | 1.04E-04 |
| 4 | GO:0005829: cytosol | 1.22E-04 |
| 5 | GO:0031966: mitochondrial membrane | 4.63E-04 |
| 6 | GO:0031359: integral component of chloroplast outer membrane | 4.74E-04 |
| 7 | GO:0016604: nuclear body | 7.77E-04 |
| 8 | GO:0005783: endoplasmic reticulum | 1.05E-03 |
| 9 | GO:0009523: photosystem II | 2.60E-03 |
| 10 | GO:0009707: chloroplast outer membrane | 4.17E-03 |
| 11 | GO:0016607: nuclear speck | 8.24E-03 |
| 12 | GO:0005737: cytoplasm | 8.99E-03 |
| 13 | GO:0005759: mitochondrial matrix | 1.26E-02 |
| 14 | GO:0005773: vacuole | 1.44E-02 |
| 15 | GO:0005789: endoplasmic reticulum membrane | 1.76E-02 |
| 16 | GO:0009570: chloroplast stroma | 1.88E-02 |
| 17 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.96E-02 |
| 18 | GO:0005774: vacuolar membrane | 3.99E-02 |
| 19 | GO:0022626: cytosolic ribosome | 4.12E-02 |
| 20 | GO:0048046: apoplast | 4.18E-02 |
| 21 | GO:0005777: peroxisome | 4.69E-02 |