co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G48780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046967: cytosol to ER transport	0.00E+00
2	GO:0007229: integrin-mediated signaling pathway	2.08E-05
3	GO:0006680: glucosylceramide catabolic process	2.08E-05
4	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	9.50E-05
5	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	9.50E-05
6	GO:0033014: tetrapyrrole biosynthetic process	1.42E-04
7	GO:0015743: malate transport	1.95E-04
8	GO:0009652: thigmotropism	1.95E-04
9	GO:0045727: positive regulation of translation	1.95E-04
10	GO:0034440: lipid oxidation	1.95E-04
11	GO:0045487: gibberellin catabolic process	2.51E-04
12	GO:0030041: actin filament polymerization	2.51E-04
13	GO:0006751: glutathione catabolic process	3.11E-04
14	GO:0048317: seed morphogenesis	3.11E-04
15	GO:0010555: response to mannitol	3.73E-04
16	GO:0080086: stamen filament development	3.73E-04
17	GO:2000067: regulation of root morphogenesis	3.73E-04
18	GO:0006955: immune response	4.37E-04
19	GO:0045010: actin nucleation	5.05E-04
20	GO:0007186: G-protein coupled receptor signaling pathway	5.74E-04
21	GO:0048193: Golgi vesicle transport	5.74E-04
22	GO:0009835: fruit ripening	6.45E-04
23	GO:0006783: heme biosynthetic process	6.45E-04
24	GO:0006779: porphyrin-containing compound biosynthetic process	7.18E-04
25	GO:2000280: regulation of root development	7.18E-04
26	GO:0008202: steroid metabolic process	7.18E-04
27	GO:0006782: protoporphyrinogen IX biosynthetic process	7.94E-04
28	GO:0009750: response to fructose	8.71E-04
29	GO:0006468: protein phosphorylation	1.01E-03
30	GO:0006470: protein dephosphorylation	1.18E-03
31	GO:0009901: anther dehiscence	1.20E-03
32	GO:0009617: response to bacterium	1.23E-03
33	GO:0009695: jasmonic acid biosynthetic process	1.47E-03
34	GO:0006979: response to oxidative stress	1.50E-03
35	GO:0031408: oxylipin biosynthetic process	1.56E-03
36	GO:0009693: ethylene biosynthetic process	1.76E-03
37	GO:0009686: gibberellin biosynthetic process	1.76E-03
38	GO:0040007: growth	1.76E-03
39	GO:0010200: response to chitin	2.01E-03
40	GO:0048653: anther development	2.07E-03
41	GO:0009960: endosperm development	2.17E-03
42	GO:0048544: recognition of pollen	2.28E-03
43	GO:0009749: response to glucose	2.39E-03
44	GO:0010193: response to ozone	2.50E-03
45	GO:0009630: gravitropism	2.61E-03
46	GO:0009639: response to red or far red light	2.85E-03
47	GO:0009816: defense response to bacterium, incompatible interaction	3.33E-03
48	GO:0015995: chlorophyll biosynthetic process	3.58E-03
49	GO:0045087: innate immune response	4.51E-03
50	GO:0009611: response to wounding	5.12E-03
51	GO:0035556: intracellular signal transduction	5.29E-03
52	GO:0010114: response to red light	5.37E-03
53	GO:0009744: response to sucrose	5.37E-03
54	GO:0009742: brassinosteroid mediated signaling pathway	8.77E-03
55	GO:0015031: protein transport	1.29E-02
56	GO:0006970: response to osmotic stress	1.77E-02
57	GO:0009723: response to ethylene	1.87E-02
58	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.01E-02
59	GO:0016192: vesicle-mediated transport	2.03E-02
60	GO:0007165: signal transduction	2.12E-02
61	GO:0009737: response to abscisic acid	2.17E-02
62	GO:0006869: lipid transport	2.38E-02
63	GO:0016042: lipid catabolic process	2.54E-02
64	GO:0009408: response to heat	2.59E-02
65	GO:0048364: root development	2.67E-02
66	GO:0009753: response to jasmonic acid	2.72E-02
67	GO:0016567: protein ubiquitination	3.10E-02
68	GO:0009651: response to salt stress	3.42E-02
69	GO:0009555: pollen development	3.90E-02

Rank	GO Term	Adjusted P value
1	GO:0004348: glucosylceramidase activity	2.08E-05
2	GO:0008883: glutamyl-tRNA reductase activity	5.37E-05
3	GO:0001664: G-protein coupled receptor binding	9.50E-05
4	GO:0031683: G-protein beta/gamma-subunit complex binding	9.50E-05
5	GO:0003840: gamma-glutamyltransferase activity	9.50E-05
6	GO:0036374: glutathione hydrolase activity	9.50E-05
7	GO:0004383: guanylate cyclase activity	9.50E-05
8	GO:0016165: linoleate 13S-lipoxygenase activity	9.50E-05
9	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.42E-04
10	GO:0001653: peptide receptor activity	1.42E-04
11	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.42E-04
12	GO:0005253: anion channel activity	1.95E-04
13	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.51E-04
14	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.77E-04
15	GO:0015140: malate transmembrane transporter activity	4.37E-04
16	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	5.05E-04
17	GO:0008142: oxysterol binding	5.74E-04
18	GO:0004630: phospholipase D activity	5.74E-04
19	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.74E-04
20	GO:0019888: protein phosphatase regulator activity	1.03E-03
21	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.56E-03
22	GO:0004672: protein kinase activity	2.41E-03
23	GO:0004871: signal transducer activity	2.43E-03
24	GO:0004722: protein serine/threonine phosphatase activity	2.54E-03
25	GO:0004721: phosphoprotein phosphatase activity	3.58E-03
26	GO:0005096: GTPase activator activity	3.97E-03
27	GO:0046872: metal ion binding	4.55E-03
28	GO:0050661: NADP binding	4.93E-03
29	GO:0035091: phosphatidylinositol binding	5.66E-03
30	GO:0003779: actin binding	8.25E-03
31	GO:0030170: pyridoxal phosphate binding	1.06E-02
32	GO:0004674: protein serine/threonine kinase activity	1.12E-02
33	GO:0004842: ubiquitin-protein transferase activity	1.40E-02
34	GO:0016301: kinase activity	1.48E-02
35	GO:0046982: protein heterodimerization activity	1.66E-02
36	GO:0042803: protein homodimerization activity	2.31E-02
37	GO:0003924: GTPase activity	2.59E-02
38	GO:0008289: lipid binding	3.28E-02
39	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.75E-02
40	GO:0030246: carbohydrate binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0031463: Cul3-RING ubiquitin ligase complex	3.11E-04
2	GO:0000159: protein phosphatase type 2A complex	8.71E-04
3	GO:0005737: cytoplasm	8.75E-04
4	GO:0030136: clathrin-coated vesicle	1.96E-03
5	GO:0009707: chloroplast outer membrane	3.84E-03
6	GO:0005834: heterotrimeric G-protein complex	7.73E-03
7	GO:0005623: cell	1.00E-02
8	GO:0009524: phragmoplast	1.02E-02
9	GO:0009705: plant-type vacuole membrane	1.24E-02
10	GO:0009506: plasmodesma	3.86E-02