co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G48760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
2	GO:0032497: detection of lipopolysaccharide	0.00E+00
3	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
4	GO:0046967: cytosol to ER transport	0.00E+00
5	GO:0032499: detection of peptidoglycan	0.00E+00
6	GO:2001143: N-methylnicotinate transport	0.00E+00
7	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
8	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
9	GO:2001142: nicotinate transport	0.00E+00
10	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
11	GO:0010200: response to chitin	1.90E-12
12	GO:0006468: protein phosphorylation	2.26E-07
13	GO:0046777: protein autophosphorylation	3.60E-07
14	GO:0045087: innate immune response	2.50E-06
15	GO:0007166: cell surface receptor signaling pathway	1.06E-05
16	GO:0002679: respiratory burst involved in defense response	1.63E-05
17	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.88E-05
18	GO:0006470: protein dephosphorylation	1.12E-04
19	GO:0006955: immune response	1.31E-04
20	GO:0048544: recognition of pollen	1.48E-04
21	GO:0045010: actin nucleation	1.67E-04
22	GO:0002229: defense response to oomycetes	1.81E-04
23	GO:0051180: vitamin transport	2.02E-04
24	GO:0030974: thiamine pyrophosphate transport	2.02E-04
25	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	2.02E-04
26	GO:0050691: regulation of defense response to virus by host	2.02E-04
27	GO:0032491: detection of molecule of fungal origin	2.02E-04
28	GO:1900384: regulation of flavonol biosynthetic process	2.02E-04
29	GO:0006083: acetate metabolic process	2.02E-04
30	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.02E-04
31	GO:0051865: protein autoubiquitination	2.53E-04
32	GO:0009742: brassinosteroid mediated signaling pathway	2.85E-04
33	GO:0006952: defense response	3.37E-04
34	GO:0007064: mitotic sister chromatid cohesion	3.54E-04
35	GO:0008219: cell death	4.26E-04
36	GO:0042742: defense response to bacterium	4.46E-04
37	GO:0015893: drug transport	4.52E-04
38	GO:0002221: pattern recognition receptor signaling pathway	4.52E-04
39	GO:0046939: nucleotide phosphorylation	4.52E-04
40	GO:0010155: regulation of proton transport	4.52E-04
41	GO:0070588: calcium ion transmembrane transport	6.71E-04
42	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.36E-04
43	GO:0006598: polyamine catabolic process	7.36E-04
44	GO:1900140: regulation of seedling development	7.36E-04
45	GO:0009695: jasmonic acid biosynthetic process	9.08E-04
46	GO:0016310: phosphorylation	1.03E-03
47	GO:0033014: tetrapyrrole biosynthetic process	1.05E-03
48	GO:0015696: ammonium transport	1.05E-03
49	GO:0071323: cellular response to chitin	1.05E-03
50	GO:0030100: regulation of endocytosis	1.05E-03
51	GO:0046686: response to cadmium ion	1.19E-03
52	GO:0034440: lipid oxidation	1.40E-03
53	GO:0010107: potassium ion import	1.40E-03
54	GO:0071219: cellular response to molecule of bacterial origin	1.40E-03
55	GO:1902347: response to strigolactone	1.40E-03
56	GO:0015743: malate transport	1.40E-03
57	GO:0060548: negative regulation of cell death	1.40E-03
58	GO:0072488: ammonium transmembrane transport	1.40E-03
59	GO:0009620: response to fungus	1.59E-03
60	GO:0009555: pollen development	1.73E-03
61	GO:0030041: actin filament polymerization	1.78E-03
62	GO:0009164: nucleoside catabolic process	1.78E-03
63	GO:0009611: response to wounding	1.80E-03
64	GO:0035556: intracellular signal transduction	1.90E-03
65	GO:0010193: response to ozone	1.98E-03
66	GO:1900425: negative regulation of defense response to bacterium	2.19E-03
67	GO:0010337: regulation of salicylic acid metabolic process	2.19E-03
68	GO:0006014: D-ribose metabolic process	2.19E-03
69	GO:0010942: positive regulation of cell death	2.19E-03
70	GO:0015691: cadmium ion transport	2.19E-03
71	GO:0006751: glutathione catabolic process	2.19E-03
72	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.19E-03
73	GO:0048317: seed morphogenesis	2.19E-03
74	GO:0006828: manganese ion transport	2.19E-03
75	GO:0010555: response to mannitol	2.63E-03
76	GO:0080086: stamen filament development	2.63E-03
77	GO:2000067: regulation of root morphogenesis	2.63E-03
78	GO:0009816: defense response to bacterium, incompatible interaction	3.01E-03
79	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.09E-03
80	GO:0070370: cellular heat acclimation	3.09E-03
81	GO:0010161: red light signaling pathway	3.09E-03
82	GO:1900150: regulation of defense response to fungus	3.59E-03
83	GO:0048658: anther wall tapetum development	3.59E-03
84	GO:0009932: cell tip growth	4.10E-03
85	GO:0007186: G-protein coupled receptor signaling pathway	4.10E-03
86	GO:0009617: response to bacterium	4.47E-03
87	GO:0090333: regulation of stomatal closure	4.65E-03
88	GO:0006783: heme biosynthetic process	4.65E-03
89	GO:0008202: steroid metabolic process	5.21E-03
90	GO:0006779: porphyrin-containing compound biosynthetic process	5.21E-03
91	GO:0006839: mitochondrial transport	5.34E-03
92	GO:0006782: protoporphyrinogen IX biosynthetic process	5.80E-03
93	GO:0019538: protein metabolic process	5.80E-03
94	GO:0009651: response to salt stress	6.30E-03
95	GO:0009750: response to fructose	6.41E-03
96	GO:0030148: sphingolipid biosynthetic process	6.41E-03
97	GO:0006816: calcium ion transport	6.41E-03
98	GO:0006970: response to osmotic stress	6.84E-03
99	GO:0055046: microgametogenesis	7.70E-03
100	GO:0080167: response to karrikin	8.18E-03
101	GO:0034605: cellular response to heat	8.37E-03
102	GO:0002237: response to molecule of bacterial origin	8.37E-03
103	GO:0046854: phosphatidylinositol phosphorylation	9.07E-03
104	GO:0080188: RNA-directed DNA methylation	9.07E-03
105	GO:0009901: anther dehiscence	9.07E-03
106	GO:0009863: salicylic acid mediated signaling pathway	1.05E-02
107	GO:0006810: transport	1.16E-02
108	GO:0018105: peptidyl-serine phosphorylation	1.20E-02
109	GO:0031408: oxylipin biosynthetic process	1.21E-02
110	GO:0016998: cell wall macromolecule catabolic process	1.21E-02
111	GO:0016226: iron-sulfur cluster assembly	1.29E-02
112	GO:0040007: growth	1.37E-02
113	GO:0071215: cellular response to abscisic acid stimulus	1.37E-02
114	GO:0019722: calcium-mediated signaling	1.45E-02
115	GO:0006817: phosphate ion transport	1.45E-02
116	GO:0016567: protein ubiquitination	1.46E-02
117	GO:0010118: stomatal movement	1.62E-02
118	GO:0048653: anther development	1.62E-02
119	GO:0042631: cellular response to water deprivation	1.62E-02
120	GO:0009960: endosperm development	1.71E-02
121	GO:0009749: response to glucose	1.89E-02
122	GO:0019252: starch biosynthetic process	1.89E-02
123	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.92E-02
124	GO:0009414: response to water deprivation	1.98E-02
125	GO:0006979: response to oxidative stress	2.08E-02
126	GO:0010090: trichome morphogenesis	2.18E-02
127	GO:0009737: response to abscisic acid	2.20E-02
128	GO:0006904: vesicle docking involved in exocytosis	2.38E-02
129	GO:0010468: regulation of gene expression	2.40E-02
130	GO:0001666: response to hypoxia	2.58E-02
131	GO:0009615: response to virus	2.58E-02
132	GO:0009738: abscisic acid-activated signaling pathway	2.66E-02
133	GO:0048573: photoperiodism, flowering	2.90E-02
134	GO:0006950: response to stress	2.90E-02
135	GO:0015995: chlorophyll biosynthetic process	2.90E-02
136	GO:0016049: cell growth	3.01E-02
137	GO:0009817: defense response to fungus, incompatible interaction	3.12E-02
138	GO:0009409: response to cold	3.21E-02
139	GO:0048366: leaf development	3.67E-02
140	GO:0016051: carbohydrate biosynthetic process	3.69E-02
141	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.99E-02
142	GO:0030001: metal ion transport	4.05E-02
143	GO:0006887: exocytosis	4.18E-02
144	GO:0006897: endocytosis	4.18E-02
145	GO:0006631: fatty acid metabolic process	4.18E-02
146	GO:0009640: photomorphogenesis	4.42E-02
147	GO:0009744: response to sucrose	4.42E-02
148	GO:0051707: response to other organism	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
4	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
5	GO:0090416: nicotinate transporter activity	0.00E+00
6	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
7	GO:0005522: profilin binding	0.00E+00
8	GO:0016301: kinase activity	7.02E-11
9	GO:0005524: ATP binding	1.44E-09
10	GO:0004674: protein serine/threonine kinase activity	4.49E-07
11	GO:0004672: protein kinase activity	1.54E-06
12	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.89E-06
13	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.67E-04
14	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	2.02E-04
15	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.02E-04
16	GO:0052894: norspermine:oxygen oxidoreductase activity	2.02E-04
17	GO:0003987: acetate-CoA ligase activity	2.02E-04
18	GO:0090422: thiamine pyrophosphate transporter activity	2.02E-04
19	GO:0015085: calcium ion transmembrane transporter activity	2.02E-04
20	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.52E-04
21	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	4.52E-04
22	GO:0004103: choline kinase activity	4.52E-04
23	GO:0008883: glutamyl-tRNA reductase activity	4.52E-04
24	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	4.52E-04
25	GO:0004722: protein serine/threonine phosphatase activity	5.16E-04
26	GO:0005388: calcium-transporting ATPase activity	5.33E-04
27	GO:0031683: G-protein beta/gamma-subunit complex binding	7.36E-04
28	GO:0003840: gamma-glutamyltransferase activity	7.36E-04
29	GO:0004758: serine C-palmitoyltransferase activity	7.36E-04
30	GO:0036374: glutathione hydrolase activity	7.36E-04
31	GO:0046423: allene-oxide cyclase activity	7.36E-04
32	GO:0004383: guanylate cyclase activity	7.36E-04
33	GO:0016165: linoleate 13S-lipoxygenase activity	7.36E-04
34	GO:0001664: G-protein coupled receptor binding	7.36E-04
35	GO:0046592: polyamine oxidase activity	7.36E-04
36	GO:0005516: calmodulin binding	9.23E-04
37	GO:0033612: receptor serine/threonine kinase binding	9.94E-04
38	GO:0019201: nucleotide kinase activity	1.05E-03
39	GO:0001653: peptide receptor activity	1.05E-03
40	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.05E-03
41	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.05E-03
42	GO:0005253: anion channel activity	1.40E-03
43	GO:0015368: calcium:cation antiporter activity	1.40E-03
44	GO:0015369: calcium:proton antiporter activity	1.40E-03
45	GO:0019199: transmembrane receptor protein kinase activity	1.40E-03
46	GO:0003779: actin binding	1.72E-03
47	GO:0047631: ADP-ribose diphosphatase activity	1.78E-03
48	GO:0002020: protease binding	1.78E-03
49	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.78E-03
50	GO:0000210: NAD+ diphosphatase activity	2.19E-03
51	GO:0016208: AMP binding	2.19E-03
52	GO:0008519: ammonium transmembrane transporter activity	2.19E-03
53	GO:0004017: adenylate kinase activity	2.63E-03
54	GO:0019900: kinase binding	2.63E-03
55	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.63E-03
56	GO:0004747: ribokinase activity	2.63E-03
57	GO:0030246: carbohydrate binding	2.91E-03
58	GO:0008143: poly(A) binding	3.09E-03
59	GO:0004143: diacylglycerol kinase activity	3.09E-03
60	GO:0015140: malate transmembrane transporter activity	3.09E-03
61	GO:0004842: ubiquitin-protein transferase activity	3.14E-03
62	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.17E-03
63	GO:0004721: phosphoprotein phosphatase activity	3.35E-03
64	GO:0004683: calmodulin-dependent protein kinase activity	3.35E-03
65	GO:0008865: fructokinase activity	3.59E-03
66	GO:0004430: 1-phosphatidylinositol 4-kinase activity	4.10E-03
67	GO:0003951: NAD+ kinase activity	4.10E-03
68	GO:0008142: oxysterol binding	4.10E-03
69	GO:0004630: phospholipase D activity	4.10E-03
70	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.10E-03
71	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.28E-03
72	GO:0003678: DNA helicase activity	4.65E-03
73	GO:0005509: calcium ion binding	5.18E-03
74	GO:0043565: sequence-specific DNA binding	5.88E-03
75	GO:0035091: phosphatidylinositol binding	6.53E-03
76	GO:0003682: chromatin binding	6.68E-03
77	GO:0019888: protein phosphatase regulator activity	7.70E-03
78	GO:0008131: primary amine oxidase activity	8.37E-03
79	GO:0008061: chitin binding	9.07E-03
80	GO:0046872: metal ion binding	9.66E-03
81	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.03E-02
82	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.18E-02
83	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.21E-02
84	GO:0022891: substrate-specific transmembrane transporter activity	1.37E-02
85	GO:0044212: transcription regulatory region DNA binding	2.05E-02
86	GO:0051015: actin filament binding	2.18E-02
87	GO:0008375: acetylglucosaminyltransferase activity	2.80E-02
88	GO:0030247: polysaccharide binding	2.90E-02
89	GO:0050660: flavin adenine dinucleotide binding	3.60E-02
90	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.93E-02
91	GO:0051539: 4 iron, 4 sulfur cluster binding	4.05E-02
92	GO:0050661: NADP binding	4.05E-02
93	GO:0051537: 2 iron, 2 sulfur cluster binding	4.68E-02
94	GO:0004871: signal transducer activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	4.29E-10
2	GO:0019008: molybdopterin synthase complex	2.02E-04
3	GO:0005911: cell-cell junction	2.02E-04
4	GO:0070062: extracellular exosome	1.05E-03
5	GO:0016363: nuclear matrix	2.63E-03
6	GO:0016021: integral component of membrane	3.15E-03
7	GO:0009514: glyoxysome	4.10E-03
8	GO:0009506: plasmodesma	4.43E-03
9	GO:0010494: cytoplasmic stress granule	4.65E-03
10	GO:0015030: Cajal body	5.21E-03
11	GO:0000159: protein phosphatase type 2A complex	6.41E-03
12	GO:0005737: cytoplasm	7.35E-03
13	GO:0043234: protein complex	9.79E-03
14	GO:0005758: mitochondrial intermembrane space	1.05E-02
15	GO:0005789: endoplasmic reticulum membrane	1.24E-02
16	GO:0030136: clathrin-coated vesicle	1.54E-02
17	GO:0009705: plant-type vacuole membrane	2.01E-02
18	GO:0000145: exocyst	2.08E-02
19	GO:0005778: peroxisomal membrane	2.38E-02
20	GO:0009707: chloroplast outer membrane	3.12E-02
21	GO:0090406: pollen tube	4.42E-02