Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009268: response to pH0.00E+00
2GO:1900067: regulation of cellular response to alkaline pH0.00E+00
3GO:0080148: negative regulation of response to water deprivation9.40E-05
4GO:0048838: release of seed from dormancy9.40E-05
5GO:0080055: low-affinity nitrate transport1.63E-04
6GO:0010366: negative regulation of ethylene biosynthetic process1.63E-04
7GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process1.63E-04
8GO:0010581: regulation of starch biosynthetic process1.63E-04
9GO:0009611: response to wounding2.27E-04
10GO:0080024: indolebutyric acid metabolic process2.40E-04
11GO:0009694: jasmonic acid metabolic process3.24E-04
12GO:0009687: abscisic acid metabolic process3.24E-04
13GO:0046345: abscisic acid catabolic process3.24E-04
14GO:0015867: ATP transport3.24E-04
15GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.42E-04
16GO:0030041: actin filament polymerization4.13E-04
17GO:0009407: toxin catabolic process4.63E-04
18GO:0033365: protein localization to organelle5.07E-04
19GO:0015866: ADP transport5.07E-04
20GO:0048317: seed morphogenesis5.07E-04
21GO:0009867: jasmonic acid mediated signaling pathway5.29E-04
22GO:0071669: plant-type cell wall organization or biogenesis7.07E-04
23GO:0009636: response to toxic substance7.56E-04
24GO:0009850: auxin metabolic process8.13E-04
25GO:0009690: cytokinin metabolic process8.13E-04
26GO:0045010: actin nucleation8.13E-04
27GO:0009787: regulation of abscisic acid-activated signaling pathway8.13E-04
28GO:0009651: response to salt stress9.05E-04
29GO:0009699: phenylpropanoid biosynthetic process9.23E-04
30GO:0009835: fruit ripening1.04E-03
31GO:0006949: syncytium formation1.28E-03
32GO:0010215: cellulose microfibril organization1.28E-03
33GO:0072593: reactive oxygen species metabolic process1.40E-03
34GO:1903507: negative regulation of nucleic acid-templated transcription1.40E-03
35GO:0015706: nitrate transport1.53E-03
36GO:0000266: mitochondrial fission1.53E-03
37GO:0018107: peptidyl-threonine phosphorylation1.67E-03
38GO:0034605: cellular response to heat1.81E-03
39GO:0090351: seedling development1.95E-03
40GO:0009737: response to abscisic acid2.06E-03
41GO:0009695: jasmonic acid biosynthetic process2.40E-03
42GO:0043622: cortical microtubule organization2.40E-03
43GO:0031408: oxylipin biosynthetic process2.56E-03
44GO:2000022: regulation of jasmonic acid mediated signaling pathway2.72E-03
45GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.89E-03
46GO:0009693: ethylene biosynthetic process2.89E-03
47GO:0000271: polysaccharide biosynthetic process3.40E-03
48GO:0006970: response to osmotic stress3.52E-03
49GO:0010268: brassinosteroid homeostasis3.58E-03
50GO:0009960: endosperm development3.58E-03
51GO:0048544: recognition of pollen3.76E-03
52GO:0006635: fatty acid beta-oxidation4.13E-03
53GO:0016132: brassinosteroid biosynthetic process4.13E-03
54GO:0009639: response to red or far red light4.70E-03
55GO:0009828: plant-type cell wall loosening4.70E-03
56GO:0016125: sterol metabolic process4.70E-03
57GO:0016579: protein deubiquitination5.11E-03
58GO:0009409: response to cold5.64E-03
59GO:0042128: nitrate assimilation5.73E-03
60GO:0016049: cell growth6.16E-03
61GO:0030244: cellulose biosynthetic process6.38E-03
62GO:0009753: response to jasmonic acid6.39E-03
63GO:0009832: plant-type cell wall biogenesis6.60E-03
64GO:0048767: root hair elongation6.60E-03
65GO:0010311: lateral root formation6.60E-03
66GO:0006355: regulation of transcription, DNA-templated6.90E-03
67GO:0010119: regulation of stomatal movement7.05E-03
68GO:0006839: mitochondrial transport8.23E-03
69GO:0009738: abscisic acid-activated signaling pathway1.02E-02
70GO:0031347: regulation of defense response1.02E-02
71GO:0009664: plant-type cell wall organization1.05E-02
72GO:0006857: oligopeptide transport1.16E-02
73GO:0018105: peptidyl-serine phosphorylation1.45E-02
74GO:0009058: biosynthetic process1.73E-02
75GO:0009414: response to water deprivation2.10E-02
76GO:0071555: cell wall organization2.15E-02
77GO:0006470: protein dephosphorylation2.30E-02
78GO:0009826: unidimensional cell growth2.78E-02
79GO:0009658: chloroplast organization2.85E-02
80GO:0007049: cell cycle3.08E-02
81GO:0005975: carbohydrate metabolic process3.26E-02
82GO:0007275: multicellular organism development4.21E-02
83GO:0032259: methylation4.25E-02
84GO:0009751: response to salicylic acid4.34E-02
85GO:0006629: lipid metabolic process4.39E-02
86GO:0009408: response to heat4.39E-02
87GO:0008152: metabolic process4.70E-02
RankGO TermAdjusted P value
1GO:0030795: jasmonate O-methyltransferase activity0.00E+00
2GO:0102078: methyl jasmonate methylesterase activity0.00E+00
3GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.63E-04
4GO:0080054: low-affinity nitrate transmembrane transporter activity1.63E-04
5GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.40E-04
6GO:0051753: mannan synthase activity6.05E-04
7GO:0005347: ATP transmembrane transporter activity6.05E-04
8GO:0015217: ADP transmembrane transporter activity6.05E-04
9GO:0003950: NAD+ ADP-ribosyltransferase activity6.05E-04
10GO:0004364: glutathione transferase activity6.50E-04
11GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity8.13E-04
12GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.04E-03
13GO:0016207: 4-coumarate-CoA ligase activity1.04E-03
14GO:0047617: acyl-CoA hydrolase activity1.15E-03
15GO:0016874: ligase activity1.18E-03
16GO:0004860: protein kinase inhibitor activity1.40E-03
17GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.81E-03
18GO:0003714: transcription corepressor activity2.25E-03
19GO:0016760: cellulose synthase (UDP-forming) activity2.89E-03
20GO:0005199: structural constituent of cell wall3.58E-03
21GO:0016853: isomerase activity3.76E-03
22GO:0019901: protein kinase binding3.94E-03
23GO:0004843: thiol-dependent ubiquitin-specific protease activity4.13E-03
24GO:0016759: cellulose synthase activity4.70E-03
25GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.90E-03
26GO:0004721: phosphoprotein phosphatase activity5.94E-03
27GO:0015293: symporter activity9.73E-03
28GO:0003779: actin binding1.39E-02
29GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.40E-02
30GO:0019825: oxygen binding1.51E-02
31GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.69E-02
32GO:0030170: pyridoxal phosphate binding1.79E-02
33GO:0015297: antiporter activity2.02E-02
34GO:0005506: iron ion binding2.11E-02
35GO:0042802: identical protein binding2.48E-02
36GO:0016788: hydrolase activity, acting on ester bonds2.89E-02
37GO:0020037: heme binding3.39E-02
38GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.78E-02
39GO:0004722: protein serine/threonine phosphatase activity4.03E-02
40GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.08E-02
41GO:0003700: transcription factor activity, sequence-specific DNA binding4.34E-02
42GO:0016301: kinase activity4.54E-02
RankGO TermAdjusted P value
1GO:0008287: protein serine/threonine phosphatase complex1.63E-04
2GO:0030173: integral component of Golgi membrane6.05E-04
3GO:0016363: nuclear matrix6.05E-04
4GO:0005779: integral component of peroxisomal membrane9.23E-04
5GO:0005884: actin filament1.40E-03
6GO:0005741: mitochondrial outer membrane2.56E-03
7GO:0005618: cell wall5.28E-03
8GO:0005886: plasma membrane6.22E-03
9GO:0005634: nucleus6.93E-03
10GO:0031225: anchored component of membrane1.65E-02
11GO:0009524: phragmoplast1.73E-02
12GO:0046658: anchored component of plasma membrane2.55E-02
13GO:0005737: cytoplasm2.93E-02
14GO:0005743: mitochondrial inner membrane4.17E-02
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Gene type



Gene DE type