GO Enrichment Analysis of Co-expressed Genes with
AT3G48140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015746: citrate transport | 0.00E+00 |
| 2 | GO:0046487: glyoxylate metabolic process | 0.00E+00 |
| 3 | GO:0007530: sex determination | 0.00E+00 |
| 4 | GO:0006412: translation | 1.38E-16 |
| 5 | GO:0042254: ribosome biogenesis | 2.88E-12 |
| 6 | GO:0009853: photorespiration | 3.43E-08 |
| 7 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.19E-06 |
| 8 | GO:0043248: proteasome assembly | 5.21E-05 |
| 9 | GO:0022900: electron transport chain | 1.56E-04 |
| 10 | GO:0032365: intracellular lipid transport | 1.67E-04 |
| 11 | GO:2001006: regulation of cellulose biosynthetic process | 1.67E-04 |
| 12 | GO:0009735: response to cytokinin | 1.86E-04 |
| 13 | GO:0098656: anion transmembrane transport | 1.91E-04 |
| 14 | GO:0009245: lipid A biosynthetic process | 1.91E-04 |
| 15 | GO:0006820: anion transport | 3.60E-04 |
| 16 | GO:0071668: plant-type cell wall assembly | 3.78E-04 |
| 17 | GO:0051788: response to misfolded protein | 3.78E-04 |
| 18 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.35E-04 |
| 19 | GO:0045793: positive regulation of cell size | 6.19E-04 |
| 20 | GO:0006487: protein N-linked glycosylation | 6.38E-04 |
| 21 | GO:0015992: proton transport | 7.70E-04 |
| 22 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.59E-04 |
| 23 | GO:0006228: UTP biosynthetic process | 8.83E-04 |
| 24 | GO:0009647: skotomorphogenesis | 8.83E-04 |
| 25 | GO:0032877: positive regulation of DNA endoreduplication | 8.83E-04 |
| 26 | GO:0070301: cellular response to hydrogen peroxide | 8.83E-04 |
| 27 | GO:0006241: CTP biosynthetic process | 8.83E-04 |
| 28 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 8.83E-04 |
| 29 | GO:0006165: nucleoside diphosphate phosphorylation | 8.83E-04 |
| 30 | GO:0015991: ATP hydrolysis coupled proton transport | 1.15E-03 |
| 31 | GO:0032366: intracellular sterol transport | 1.17E-03 |
| 32 | GO:0051781: positive regulation of cell division | 1.17E-03 |
| 33 | GO:0006183: GTP biosynthetic process | 1.17E-03 |
| 34 | GO:0010363: regulation of plant-type hypersensitive response | 1.17E-03 |
| 35 | GO:0009554: megasporogenesis | 2.19E-03 |
| 36 | GO:0010044: response to aluminum ion | 2.58E-03 |
| 37 | GO:0032880: regulation of protein localization | 2.58E-03 |
| 38 | GO:0048528: post-embryonic root development | 2.58E-03 |
| 39 | GO:0000028: ribosomal small subunit assembly | 2.99E-03 |
| 40 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.99E-03 |
| 41 | GO:0009617: response to bacterium | 3.17E-03 |
| 42 | GO:0009808: lignin metabolic process | 3.41E-03 |
| 43 | GO:0009060: aerobic respiration | 3.86E-03 |
| 44 | GO:0010449: root meristem growth | 4.33E-03 |
| 45 | GO:0043069: negative regulation of programmed cell death | 4.81E-03 |
| 46 | GO:0048229: gametophyte development | 5.32E-03 |
| 47 | GO:0016925: protein sumoylation | 5.84E-03 |
| 48 | GO:0010628: positive regulation of gene expression | 6.38E-03 |
| 49 | GO:0006626: protein targeting to mitochondrion | 6.38E-03 |
| 50 | GO:0045454: cell redox homeostasis | 7.29E-03 |
| 51 | GO:0006406: mRNA export from nucleus | 8.70E-03 |
| 52 | GO:0007005: mitochondrion organization | 1.06E-02 |
| 53 | GO:0034220: ion transmembrane transport | 1.34E-02 |
| 54 | GO:0000413: protein peptidyl-prolyl isomerization | 1.34E-02 |
| 55 | GO:0006633: fatty acid biosynthetic process | 1.39E-02 |
| 56 | GO:0015986: ATP synthesis coupled proton transport | 1.49E-02 |
| 57 | GO:0048825: cotyledon development | 1.56E-02 |
| 58 | GO:0009556: microsporogenesis | 1.56E-02 |
| 59 | GO:0010183: pollen tube guidance | 1.56E-02 |
| 60 | GO:0009793: embryo development ending in seed dormancy | 1.59E-02 |
| 61 | GO:0010193: response to ozone | 1.64E-02 |
| 62 | GO:0000302: response to reactive oxygen species | 1.64E-02 |
| 63 | GO:0006635: fatty acid beta-oxidation | 1.64E-02 |
| 64 | GO:0009630: gravitropism | 1.72E-02 |
| 65 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.72E-02 |
| 66 | GO:0030163: protein catabolic process | 1.80E-02 |
| 67 | GO:0008380: RNA splicing | 1.83E-02 |
| 68 | GO:0006914: autophagy | 1.88E-02 |
| 69 | GO:0010286: heat acclimation | 1.96E-02 |
| 70 | GO:0000910: cytokinesis | 2.04E-02 |
| 71 | GO:0010029: regulation of seed germination | 2.22E-02 |
| 72 | GO:0016049: cell growth | 2.48E-02 |
| 73 | GO:0009817: defense response to fungus, incompatible interaction | 2.57E-02 |
| 74 | GO:0046686: response to cadmium ion | 2.64E-02 |
| 75 | GO:0009631: cold acclimation | 2.85E-02 |
| 76 | GO:0010043: response to zinc ion | 2.85E-02 |
| 77 | GO:0000724: double-strand break repair via homologous recombination | 2.95E-02 |
| 78 | GO:0006099: tricarboxylic acid cycle | 3.14E-02 |
| 79 | GO:0008283: cell proliferation | 3.65E-02 |
| 80 | GO:0009926: auxin polar transport | 3.65E-02 |
| 81 | GO:0000209: protein polyubiquitination | 3.75E-02 |
| 82 | GO:0006855: drug transmembrane transport | 4.07E-02 |
| 83 | GO:0055114: oxidation-reduction process | 4.28E-02 |
| 84 | GO:0009408: response to heat | 4.34E-02 |
| 85 | GO:0006486: protein glycosylation | 4.51E-02 |
| 86 | GO:0009736: cytokinin-activated signaling pathway | 4.51E-02 |
| 87 | GO:0009909: regulation of flower development | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 3.45E-21 |
| 2 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.19E-06 |
| 3 | GO:0004576: oligosaccharyl transferase activity | 2.16E-05 |
| 4 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.16E-05 |
| 5 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.50E-05 |
| 6 | GO:0004298: threonine-type endopeptidase activity | 4.17E-05 |
| 7 | GO:0031177: phosphopantetheine binding | 5.21E-05 |
| 8 | GO:0000035: acyl binding | 7.27E-05 |
| 9 | GO:0015288: porin activity | 1.25E-04 |
| 10 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.25E-04 |
| 11 | GO:0008308: voltage-gated anion channel activity | 1.56E-04 |
| 12 | GO:0019786: Atg8-specific protease activity | 1.67E-04 |
| 13 | GO:0015137: citrate transmembrane transporter activity | 1.67E-04 |
| 14 | GO:0004129: cytochrome-c oxidase activity | 3.13E-04 |
| 15 | GO:0050897: cobalt ion binding | 3.64E-04 |
| 16 | GO:0019779: Atg8 activating enzyme activity | 3.78E-04 |
| 17 | GO:0032934: sterol binding | 3.78E-04 |
| 18 | GO:0070180: large ribosomal subunit rRNA binding | 6.19E-04 |
| 19 | GO:0004550: nucleoside diphosphate kinase activity | 8.83E-04 |
| 20 | GO:0008233: peptidase activity | 1.06E-03 |
| 21 | GO:0019776: Atg8 ligase activity | 1.17E-03 |
| 22 | GO:0010011: auxin binding | 1.17E-03 |
| 23 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.24E-03 |
| 24 | GO:0031386: protein tag | 1.48E-03 |
| 25 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.52E-03 |
| 26 | GO:0004602: glutathione peroxidase activity | 2.19E-03 |
| 27 | GO:0051920: peroxiredoxin activity | 2.19E-03 |
| 28 | GO:0016209: antioxidant activity | 2.99E-03 |
| 29 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.32E-03 |
| 30 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 5.32E-03 |
| 31 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.38E-03 |
| 32 | GO:0004089: carbonate dehydratase activity | 6.38E-03 |
| 33 | GO:0051536: iron-sulfur cluster binding | 8.70E-03 |
| 34 | GO:0019843: rRNA binding | 1.11E-02 |
| 35 | GO:0004872: receptor activity | 1.56E-02 |
| 36 | GO:0015250: water channel activity | 2.13E-02 |
| 37 | GO:0004601: peroxidase activity | 2.38E-02 |
| 38 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.57E-02 |
| 39 | GO:0015238: drug transmembrane transporter activity | 2.67E-02 |
| 40 | GO:0003746: translation elongation factor activity | 3.05E-02 |
| 41 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.34E-02 |
| 42 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.51E-02 |
| 43 | GO:0009055: electron carrier activity | 4.65E-02 |
| 44 | GO:0031625: ubiquitin protein ligase binding | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016469: proton-transporting two-sector ATPase complex | 0.00E+00 |
| 2 | GO:0005840: ribosome | 2.33E-24 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 1.39E-14 |
| 4 | GO:0005747: mitochondrial respiratory chain complex I | 2.07E-13 |
| 5 | GO:0045271: respiratory chain complex I | 1.14E-10 |
| 6 | GO:0005750: mitochondrial respiratory chain complex III | 2.98E-09 |
| 7 | GO:0000502: proteasome complex | 6.21E-09 |
| 8 | GO:0031966: mitochondrial membrane | 1.62E-07 |
| 9 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 3.74E-07 |
| 10 | GO:0022627: cytosolic small ribosomal subunit | 7.44E-06 |
| 11 | GO:0005774: vacuolar membrane | 2.10E-05 |
| 12 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 2.16E-05 |
| 13 | GO:0022626: cytosolic ribosome | 3.06E-05 |
| 14 | GO:0008250: oligosaccharyltransferase complex | 3.50E-05 |
| 15 | GO:0005839: proteasome core complex | 4.17E-05 |
| 16 | GO:0005739: mitochondrion | 6.10E-05 |
| 17 | GO:0005773: vacuole | 1.12E-04 |
| 18 | GO:0046930: pore complex | 1.56E-04 |
| 19 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.13E-04 |
| 20 | GO:0035145: exon-exon junction complex | 3.78E-04 |
| 21 | GO:0005829: cytosol | 4.86E-04 |
| 22 | GO:0005853: eukaryotic translation elongation factor 1 complex | 6.19E-04 |
| 23 | GO:0070469: respiratory chain | 7.02E-04 |
| 24 | GO:0005741: mitochondrial outer membrane | 7.70E-04 |
| 25 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 8.83E-04 |
| 26 | GO:1990726: Lsm1-7-Pat1 complex | 8.83E-04 |
| 27 | GO:0005775: vacuolar lumen | 8.83E-04 |
| 28 | GO:0005776: autophagosome | 1.17E-03 |
| 29 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 1.17E-03 |
| 30 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.42E-03 |
| 31 | GO:0009536: plastid | 1.44E-03 |
| 32 | GO:0005746: mitochondrial respiratory chain | 1.48E-03 |
| 33 | GO:0009507: chloroplast | 1.80E-03 |
| 34 | GO:0005730: nucleolus | 2.73E-03 |
| 35 | GO:0045273: respiratory chain complex II | 2.99E-03 |
| 36 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 2.99E-03 |
| 37 | GO:0005688: U6 snRNP | 2.99E-03 |
| 38 | GO:0000421: autophagosome membrane | 2.99E-03 |
| 39 | GO:0015934: large ribosomal subunit | 3.27E-03 |
| 40 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.41E-03 |
| 41 | GO:0071011: precatalytic spliceosome | 4.33E-03 |
| 42 | GO:0005740: mitochondrial envelope | 4.81E-03 |
| 43 | GO:0071013: catalytic step 2 spliceosome | 5.32E-03 |
| 44 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.84E-03 |
| 45 | GO:0005783: endoplasmic reticulum | 6.39E-03 |
| 46 | GO:0005737: cytoplasm | 7.46E-03 |
| 47 | GO:0005769: early endosome | 8.10E-03 |
| 48 | GO:0000419: DNA-directed RNA polymerase V complex | 8.10E-03 |
| 49 | GO:0005758: mitochondrial intermembrane space | 8.70E-03 |
| 50 | GO:0031410: cytoplasmic vesicle | 1.06E-02 |
| 51 | GO:0016020: membrane | 1.31E-02 |
| 52 | GO:0005759: mitochondrial matrix | 1.39E-02 |
| 53 | GO:0005618: cell wall | 1.44E-02 |
| 54 | GO:0000932: P-body | 2.13E-02 |
| 55 | GO:0005788: endoplasmic reticulum lumen | 2.22E-02 |
| 56 | GO:0005777: peroxisome | 2.34E-02 |
| 57 | GO:0000325: plant-type vacuole | 2.85E-02 |
| 58 | GO:0000786: nucleosome | 2.95E-02 |