GO Enrichment Analysis of Co-expressed Genes with
AT3G47370
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0006412: translation | 2.60E-104 |
| 3 | GO:0042254: ribosome biogenesis | 6.89E-45 |
| 4 | GO:0000027: ribosomal large subunit assembly | 5.92E-09 |
| 5 | GO:0009955: adaxial/abaxial pattern specification | 5.98E-07 |
| 6 | GO:0006364: rRNA processing | 3.97E-06 |
| 7 | GO:0006626: protein targeting to mitochondrion | 1.18E-05 |
| 8 | GO:0042274: ribosomal small subunit biogenesis | 1.88E-05 |
| 9 | GO:0009735: response to cytokinin | 1.91E-05 |
| 10 | GO:0000028: ribosomal small subunit assembly | 1.11E-04 |
| 11 | GO:0006407: rRNA export from nucleus | 1.54E-04 |
| 12 | GO:0030490: maturation of SSU-rRNA | 1.54E-04 |
| 13 | GO:0000494: box C/D snoRNA 3'-end processing | 1.54E-04 |
| 14 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.54E-04 |
| 15 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.54E-04 |
| 16 | GO:1990258: histone glutamine methylation | 1.54E-04 |
| 17 | GO:0045905: positive regulation of translational termination | 3.51E-04 |
| 18 | GO:0045901: positive regulation of translational elongation | 3.51E-04 |
| 19 | GO:0048569: post-embryonic animal organ development | 3.51E-04 |
| 20 | GO:0006452: translational frameshifting | 3.51E-04 |
| 21 | GO:0009967: positive regulation of signal transduction | 3.51E-04 |
| 22 | GO:1902626: assembly of large subunit precursor of preribosome | 5.75E-04 |
| 23 | GO:0002181: cytoplasmic translation | 5.75E-04 |
| 24 | GO:0042256: mature ribosome assembly | 5.75E-04 |
| 25 | GO:0040007: growth | 8.23E-04 |
| 26 | GO:0009855: determination of bilateral symmetry | 8.23E-04 |
| 27 | GO:0042273: ribosomal large subunit biogenesis | 1.09E-03 |
| 28 | GO:0031167: rRNA methylation | 1.38E-03 |
| 29 | GO:0000470: maturation of LSU-rRNA | 1.70E-03 |
| 30 | GO:0006413: translational initiation | 2.02E-03 |
| 31 | GO:0000054: ribosomal subunit export from nucleus | 2.03E-03 |
| 32 | GO:0080186: developmental vegetative growth | 2.39E-03 |
| 33 | GO:0001558: regulation of cell growth | 3.16E-03 |
| 34 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.16E-03 |
| 35 | GO:0022900: electron transport chain | 3.16E-03 |
| 36 | GO:0001510: RNA methylation | 3.16E-03 |
| 37 | GO:0008283: cell proliferation | 4.13E-03 |
| 38 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 4.46E-03 |
| 39 | GO:0030422: production of siRNA involved in RNA interference | 4.46E-03 |
| 40 | GO:0010162: seed dormancy process | 4.46E-03 |
| 41 | GO:0009965: leaf morphogenesis | 4.64E-03 |
| 42 | GO:0010015: root morphogenesis | 4.92E-03 |
| 43 | GO:0006913: nucleocytoplasmic transport | 4.92E-03 |
| 44 | GO:0071365: cellular response to auxin stimulus | 5.41E-03 |
| 45 | GO:0006820: anion transport | 5.41E-03 |
| 46 | GO:0048467: gynoecium development | 6.42E-03 |
| 47 | GO:0030150: protein import into mitochondrial matrix | 8.05E-03 |
| 48 | GO:0051302: regulation of cell division | 8.63E-03 |
| 49 | GO:0007005: mitochondrion organization | 9.82E-03 |
| 50 | GO:0071215: cellular response to abscisic acid stimulus | 1.04E-02 |
| 51 | GO:0008033: tRNA processing | 1.24E-02 |
| 52 | GO:0000413: protein peptidyl-prolyl isomerization | 1.24E-02 |
| 53 | GO:0006606: protein import into nucleus | 1.24E-02 |
| 54 | GO:0010197: polar nucleus fusion | 1.31E-02 |
| 55 | GO:0009960: endosperm development | 1.31E-02 |
| 56 | GO:0015031: protein transport | 1.66E-02 |
| 57 | GO:0006811: ion transport | 2.55E-02 |
| 58 | GO:0010043: response to zinc ion | 2.64E-02 |
| 59 | GO:0045087: innate immune response | 2.81E-02 |
| 60 | GO:0006414: translational elongation | 2.83E-02 |
| 61 | GO:0009644: response to high light intensity | 3.56E-02 |
| 62 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.86E-02 |
| 63 | GO:0048367: shoot system development | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 4.59E-123 |
| 2 | GO:0003729: mRNA binding | 8.43E-18 |
| 3 | GO:0019843: rRNA binding | 1.93E-14 |
| 4 | GO:0008097: 5S rRNA binding | 1.01E-05 |
| 5 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 1.54E-04 |
| 6 | GO:1990259: histone-glutamine methyltransferase activity | 1.54E-04 |
| 7 | GO:0001055: RNA polymerase II activity | 2.04E-04 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.59E-04 |
| 9 | GO:0001054: RNA polymerase I activity | 2.81E-04 |
| 10 | GO:0001056: RNA polymerase III activity | 3.23E-04 |
| 11 | GO:0005078: MAP-kinase scaffold activity | 3.51E-04 |
| 12 | GO:0003746: translation elongation factor activity | 3.55E-04 |
| 13 | GO:0008649: rRNA methyltransferase activity | 5.75E-04 |
| 14 | GO:0008235: metalloexopeptidase activity | 2.39E-03 |
| 15 | GO:0030515: snoRNA binding | 2.39E-03 |
| 16 | GO:0043022: ribosome binding | 2.77E-03 |
| 17 | GO:0015288: porin activity | 2.77E-03 |
| 18 | GO:0008135: translation factor activity, RNA binding | 3.16E-03 |
| 19 | GO:0008308: voltage-gated anion channel activity | 3.16E-03 |
| 20 | GO:0044183: protein binding involved in protein folding | 4.92E-03 |
| 21 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.56E-03 |
| 22 | GO:0015266: protein channel activity | 5.91E-03 |
| 23 | GO:0003723: RNA binding | 6.36E-03 |
| 24 | GO:0004407: histone deacetylase activity | 8.05E-03 |
| 25 | GO:0003743: translation initiation factor activity | 1.60E-02 |
| 26 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.76E-02 |
| 27 | GO:0003924: GTPase activity | 3.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005840: ribosome | 1.59E-86 |
| 2 | GO:0022625: cytosolic large ribosomal subunit | 1.60E-82 |
| 3 | GO:0022626: cytosolic ribosome | 1.57E-68 |
| 4 | GO:0022627: cytosolic small ribosomal subunit | 3.43E-48 |
| 5 | GO:0005737: cytoplasm | 2.36E-26 |
| 6 | GO:0005730: nucleolus | 2.33E-25 |
| 7 | GO:0009506: plasmodesma | 8.30E-17 |
| 8 | GO:0005829: cytosol | 1.23E-15 |
| 9 | GO:0015934: large ribosomal subunit | 6.30E-12 |
| 10 | GO:0005774: vacuolar membrane | 3.75E-10 |
| 11 | GO:0005773: vacuole | 8.77E-10 |
| 12 | GO:0016020: membrane | 8.81E-08 |
| 13 | GO:0015935: small ribosomal subunit | 7.66E-07 |
| 14 | GO:0005618: cell wall | 2.29E-05 |
| 15 | GO:0005742: mitochondrial outer membrane translocase complex | 1.39E-04 |
| 16 | GO:0030686: 90S preribosome | 1.54E-04 |
| 17 | GO:0005736: DNA-directed RNA polymerase I complex | 1.70E-04 |
| 18 | GO:0005666: DNA-directed RNA polymerase III complex | 2.04E-04 |
| 19 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.40E-04 |
| 20 | GO:0005886: plasma membrane | 2.77E-04 |
| 21 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.23E-04 |
| 22 | GO:0005758: mitochondrial intermembrane space | 5.74E-04 |
| 23 | GO:0005741: mitochondrial outer membrane | 6.92E-04 |
| 24 | GO:0031428: box C/D snoRNP complex | 1.70E-03 |
| 25 | GO:0000974: Prp19 complex | 1.70E-03 |
| 26 | GO:0016272: prefoldin complex | 2.03E-03 |
| 27 | GO:0009507: chloroplast | 2.95E-03 |
| 28 | GO:0046930: pore complex | 3.16E-03 |
| 29 | GO:0071011: precatalytic spliceosome | 4.01E-03 |
| 30 | GO:0015030: Cajal body | 4.01E-03 |
| 31 | GO:0071013: catalytic step 2 spliceosome | 4.92E-03 |
| 32 | GO:0032040: small-subunit processome | 5.41E-03 |
| 33 | GO:0019013: viral nucleocapsid | 5.91E-03 |
| 34 | GO:0005834: heterotrimeric G-protein complex | 7.00E-03 |
| 35 | GO:0000419: DNA-directed RNA polymerase V complex | 7.49E-03 |
| 36 | GO:0005743: mitochondrial inner membrane | 7.53E-03 |
| 37 | GO:0016592: mediator complex | 1.59E-02 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 1.97E-02 |
| 39 | GO:0005622: intracellular | 3.51E-02 |
| 40 | GO:0005635: nuclear envelope | 4.37E-02 |
| 41 | GO:0005681: spliceosomal complex | 4.69E-02 |
| 42 | GO:0005747: mitochondrial respiratory chain complex I | 4.80E-02 |