GO Enrichment Analysis of Co-expressed Genes with
AT3G47070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 4 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 5 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 6 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 7 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 8 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 9 | GO:0015979: photosynthesis | 1.70E-13 |
| 10 | GO:0019253: reductive pentose-phosphate cycle | 1.69E-07 |
| 11 | GO:0018298: protein-chromophore linkage | 3.52E-07 |
| 12 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 9.95E-07 |
| 13 | GO:0048564: photosystem I assembly | 1.22E-06 |
| 14 | GO:0090391: granum assembly | 3.72E-06 |
| 15 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.70E-06 |
| 16 | GO:0009735: response to cytokinin | 1.32E-05 |
| 17 | GO:0071277: cellular response to calcium ion | 1.42E-04 |
| 18 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.42E-04 |
| 19 | GO:0042371: vitamin K biosynthetic process | 1.42E-04 |
| 20 | GO:0010028: xanthophyll cycle | 1.42E-04 |
| 21 | GO:0015995: chlorophyll biosynthetic process | 1.92E-04 |
| 22 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.49E-04 |
| 23 | GO:0080005: photosystem stoichiometry adjustment | 3.25E-04 |
| 24 | GO:0030187: melatonin biosynthetic process | 3.25E-04 |
| 25 | GO:0000256: allantoin catabolic process | 3.25E-04 |
| 26 | GO:0080183: response to photooxidative stress | 3.25E-04 |
| 27 | GO:0006729: tetrahydrobiopterin biosynthetic process | 3.25E-04 |
| 28 | GO:2000030: regulation of response to red or far red light | 3.25E-04 |
| 29 | GO:0034755: iron ion transmembrane transport | 3.25E-04 |
| 30 | GO:0006435: threonyl-tRNA aminoacylation | 3.25E-04 |
| 31 | GO:0006006: glucose metabolic process | 3.27E-04 |
| 32 | GO:0009767: photosynthetic electron transport chain | 3.27E-04 |
| 33 | GO:0010207: photosystem II assembly | 3.70E-04 |
| 34 | GO:0009644: response to high light intensity | 4.69E-04 |
| 35 | GO:0010136: ureide catabolic process | 5.33E-04 |
| 36 | GO:0071492: cellular response to UV-A | 5.33E-04 |
| 37 | GO:0009405: pathogenesis | 5.33E-04 |
| 38 | GO:0006013: mannose metabolic process | 5.33E-04 |
| 39 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.65E-04 |
| 40 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 7.63E-04 |
| 41 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 7.63E-04 |
| 42 | GO:0046739: transport of virus in multicellular host | 7.63E-04 |
| 43 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 7.63E-04 |
| 44 | GO:0090307: mitotic spindle assembly | 7.63E-04 |
| 45 | GO:0006145: purine nucleobase catabolic process | 7.63E-04 |
| 46 | GO:0031122: cytoplasmic microtubule organization | 1.01E-03 |
| 47 | GO:0006546: glycine catabolic process | 1.01E-03 |
| 48 | GO:0071486: cellular response to high light intensity | 1.01E-03 |
| 49 | GO:0009765: photosynthesis, light harvesting | 1.01E-03 |
| 50 | GO:0043097: pyrimidine nucleoside salvage | 1.28E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 1.28E-03 |
| 52 | GO:0016123: xanthophyll biosynthetic process | 1.28E-03 |
| 53 | GO:0016120: carotene biosynthetic process | 1.28E-03 |
| 54 | GO:0019761: glucosinolate biosynthetic process | 1.30E-03 |
| 55 | GO:0010190: cytochrome b6f complex assembly | 1.57E-03 |
| 56 | GO:0009643: photosynthetic acclimation | 1.57E-03 |
| 57 | GO:0050665: hydrogen peroxide biosynthetic process | 1.57E-03 |
| 58 | GO:0042549: photosystem II stabilization | 1.57E-03 |
| 59 | GO:0006206: pyrimidine nucleobase metabolic process | 1.57E-03 |
| 60 | GO:0010189: vitamin E biosynthetic process | 1.88E-03 |
| 61 | GO:0009854: oxidative photosynthetic carbon pathway | 1.88E-03 |
| 62 | GO:0015977: carbon fixation | 1.88E-03 |
| 63 | GO:0009645: response to low light intensity stimulus | 2.21E-03 |
| 64 | GO:0006401: RNA catabolic process | 2.21E-03 |
| 65 | GO:0009772: photosynthetic electron transport in photosystem II | 2.21E-03 |
| 66 | GO:0010196: nonphotochemical quenching | 2.21E-03 |
| 67 | GO:0010218: response to far red light | 2.50E-03 |
| 68 | GO:0006402: mRNA catabolic process | 2.56E-03 |
| 69 | GO:0009704: de-etiolation | 2.56E-03 |
| 70 | GO:0009231: riboflavin biosynthetic process | 2.56E-03 |
| 71 | GO:0009642: response to light intensity | 2.56E-03 |
| 72 | GO:0009637: response to blue light | 2.86E-03 |
| 73 | GO:0009853: photorespiration | 2.86E-03 |
| 74 | GO:0032544: plastid translation | 2.93E-03 |
| 75 | GO:0009658: chloroplast organization | 3.30E-03 |
| 76 | GO:0090333: regulation of stomatal closure | 3.31E-03 |
| 77 | GO:0000373: Group II intron splicing | 3.31E-03 |
| 78 | GO:0098656: anion transmembrane transport | 3.31E-03 |
| 79 | GO:0010114: response to red light | 3.68E-03 |
| 80 | GO:0009098: leucine biosynthetic process | 3.71E-03 |
| 81 | GO:0031425: chloroplast RNA processing | 3.71E-03 |
| 82 | GO:0045036: protein targeting to chloroplast | 4.12E-03 |
| 83 | GO:0006949: syncytium formation | 4.12E-03 |
| 84 | GO:0080167: response to karrikin | 4.34E-03 |
| 85 | GO:0006879: cellular iron ion homeostasis | 4.55E-03 |
| 86 | GO:0009773: photosynthetic electron transport in photosystem I | 4.55E-03 |
| 87 | GO:0055085: transmembrane transport | 4.76E-03 |
| 88 | GO:0045037: protein import into chloroplast stroma | 4.99E-03 |
| 89 | GO:0006096: glycolytic process | 5.85E-03 |
| 90 | GO:0006863: purine nucleobase transport | 6.91E-03 |
| 91 | GO:0019953: sexual reproduction | 7.95E-03 |
| 92 | GO:0007017: microtubule-based process | 7.95E-03 |
| 93 | GO:0019915: lipid storage | 8.49E-03 |
| 94 | GO:0080092: regulation of pollen tube growth | 9.05E-03 |
| 95 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.62E-03 |
| 96 | GO:0009306: protein secretion | 1.02E-02 |
| 97 | GO:0009793: embryo development ending in seed dormancy | 1.07E-02 |
| 98 | GO:0055114: oxidation-reduction process | 1.11E-02 |
| 99 | GO:0008033: tRNA processing | 1.14E-02 |
| 100 | GO:0048868: pollen tube development | 1.20E-02 |
| 101 | GO:0015986: ATP synthesis coupled proton transport | 1.26E-02 |
| 102 | GO:0006814: sodium ion transport | 1.26E-02 |
| 103 | GO:0009791: post-embryonic development | 1.33E-02 |
| 104 | GO:0010193: response to ozone | 1.39E-02 |
| 105 | GO:0016032: viral process | 1.46E-02 |
| 106 | GO:0009611: response to wounding | 1.52E-02 |
| 107 | GO:0009409: response to cold | 1.53E-02 |
| 108 | GO:0009828: plant-type cell wall loosening | 1.60E-02 |
| 109 | GO:0010286: heat acclimation | 1.67E-02 |
| 110 | GO:0006810: transport | 1.72E-02 |
| 111 | GO:0010027: thylakoid membrane organization | 1.81E-02 |
| 112 | GO:0009816: defense response to bacterium, incompatible interaction | 1.88E-02 |
| 113 | GO:0042128: nitrate assimilation | 1.96E-02 |
| 114 | GO:0009817: defense response to fungus, incompatible interaction | 2.19E-02 |
| 115 | GO:0009407: toxin catabolic process | 2.34E-02 |
| 116 | GO:0007568: aging | 2.42E-02 |
| 117 | GO:0009867: jasmonic acid mediated signaling pathway | 2.59E-02 |
| 118 | GO:0009744: response to sucrose | 3.10E-02 |
| 119 | GO:0032259: methylation | 3.31E-02 |
| 120 | GO:0009636: response to toxic substance | 3.37E-02 |
| 121 | GO:0042742: defense response to bacterium | 3.57E-02 |
| 122 | GO:0009664: plant-type cell wall organization | 3.65E-02 |
| 123 | GO:0042538: hyperosmotic salinity response | 3.65E-02 |
| 124 | GO:0006364: rRNA processing | 3.83E-02 |
| 125 | GO:0010224: response to UV-B | 3.93E-02 |
| 126 | GO:0009553: embryo sac development | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 7 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 8 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 9 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 10 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 11 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 12 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 13 | GO:0016168: chlorophyll binding | 3.78E-09 |
| 14 | GO:0019899: enzyme binding | 7.93E-07 |
| 15 | GO:0022891: substrate-specific transmembrane transporter activity | 8.96E-07 |
| 16 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 9.95E-07 |
| 17 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.63E-05 |
| 18 | GO:0043495: protein anchor | 1.63E-05 |
| 19 | GO:0048038: quinone binding | 8.85E-05 |
| 20 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.42E-04 |
| 21 | GO:0030941: chloroplast targeting sequence binding | 1.42E-04 |
| 22 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 1.42E-04 |
| 23 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.42E-04 |
| 24 | GO:0004829: threonine-tRNA ligase activity | 3.25E-04 |
| 25 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 3.25E-04 |
| 26 | GO:0004047: aminomethyltransferase activity | 3.25E-04 |
| 27 | GO:0031409: pigment binding | 4.63E-04 |
| 28 | GO:0004751: ribose-5-phosphate isomerase activity | 5.33E-04 |
| 29 | GO:0070402: NADPH binding | 5.33E-04 |
| 30 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.33E-04 |
| 31 | GO:0016851: magnesium chelatase activity | 7.63E-04 |
| 32 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 7.63E-04 |
| 33 | GO:0016984: ribulose-bisphosphate carboxylase activity | 7.63E-04 |
| 34 | GO:0008508: bile acid:sodium symporter activity | 7.63E-04 |
| 35 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 7.63E-04 |
| 36 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 7.63E-04 |
| 37 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.01E-03 |
| 38 | GO:0008891: glycolate oxidase activity | 1.01E-03 |
| 39 | GO:0051861: glycolipid binding | 1.01E-03 |
| 40 | GO:0008453: alanine-glyoxylate transaminase activity | 1.01E-03 |
| 41 | GO:0043015: gamma-tubulin binding | 1.01E-03 |
| 42 | GO:0019843: rRNA binding | 1.27E-03 |
| 43 | GO:0051011: microtubule minus-end binding | 1.28E-03 |
| 44 | GO:0004849: uridine kinase activity | 1.88E-03 |
| 45 | GO:0004559: alpha-mannosidase activity | 1.88E-03 |
| 46 | GO:0015631: tubulin binding | 1.88E-03 |
| 47 | GO:0004033: aldo-keto reductase (NADP) activity | 2.56E-03 |
| 48 | GO:0005381: iron ion transmembrane transporter activity | 3.71E-03 |
| 49 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.98E-03 |
| 50 | GO:0051287: NAD binding | 4.45E-03 |
| 51 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.55E-03 |
| 52 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.45E-03 |
| 53 | GO:0000175: 3'-5'-exoribonuclease activity | 5.45E-03 |
| 54 | GO:0005345: purine nucleobase transmembrane transporter activity | 7.95E-03 |
| 55 | GO:0008514: organic anion transmembrane transporter activity | 1.02E-02 |
| 56 | GO:0008565: protein transporter activity | 1.06E-02 |
| 57 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.20E-02 |
| 58 | GO:0008080: N-acetyltransferase activity | 1.20E-02 |
| 59 | GO:0016853: isomerase activity | 1.26E-02 |
| 60 | GO:0010181: FMN binding | 1.26E-02 |
| 61 | GO:0016491: oxidoreductase activity | 1.46E-02 |
| 62 | GO:0042802: identical protein binding | 1.55E-02 |
| 63 | GO:0005200: structural constituent of cytoskeleton | 1.67E-02 |
| 64 | GO:0008483: transaminase activity | 1.67E-02 |
| 65 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.11E-02 |
| 66 | GO:0003746: translation elongation factor activity | 2.59E-02 |
| 67 | GO:0050661: NADP binding | 2.84E-02 |
| 68 | GO:0004364: glutathione transferase activity | 3.01E-02 |
| 69 | GO:0009055: electron carrier activity | 3.71E-02 |
| 70 | GO:0005215: transporter activity | 4.04E-02 |
| 71 | GO:0003777: microtubule motor activity | 4.12E-02 |
| 72 | GO:0045735: nutrient reservoir activity | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.54E-48 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.87E-39 |
| 4 | GO:0009941: chloroplast envelope | 1.18E-20 |
| 5 | GO:0009579: thylakoid | 3.62E-19 |
| 6 | GO:0009570: chloroplast stroma | 1.41E-15 |
| 7 | GO:0009534: chloroplast thylakoid | 1.70E-13 |
| 8 | GO:0009523: photosystem II | 8.49E-12 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.55E-06 |
| 10 | GO:0010287: plastoglobule | 1.11E-05 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 1.27E-05 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 2.49E-05 |
| 13 | GO:0016020: membrane | 3.04E-05 |
| 14 | GO:0009538: photosystem I reaction center | 9.72E-05 |
| 15 | GO:0009706: chloroplast inner membrane | 1.10E-04 |
| 16 | GO:0010319: stromule | 1.29E-04 |
| 17 | GO:0009515: granal stacked thylakoid | 1.42E-04 |
| 18 | GO:0009782: photosystem I antenna complex | 1.42E-04 |
| 19 | GO:0048046: apoplast | 2.24E-04 |
| 20 | GO:0008274: gamma-tubulin ring complex | 3.25E-04 |
| 21 | GO:0030095: chloroplast photosystem II | 3.70E-04 |
| 22 | GO:0031977: thylakoid lumen | 3.82E-04 |
| 23 | GO:0033281: TAT protein transport complex | 5.33E-04 |
| 24 | GO:0009573: chloroplast ribulose bisphosphate carboxylase complex | 5.33E-04 |
| 25 | GO:0010007: magnesium chelatase complex | 5.33E-04 |
| 26 | GO:0042651: thylakoid membrane | 5.65E-04 |
| 27 | GO:0000923: equatorial microtubule organizing center | 7.63E-04 |
| 28 | GO:0009536: plastid | 9.18E-04 |
| 29 | GO:0030286: dynein complex | 1.01E-03 |
| 30 | GO:0019898: extrinsic component of membrane | 1.14E-03 |
| 31 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.57E-03 |
| 32 | GO:0031359: integral component of chloroplast outer membrane | 2.21E-03 |
| 33 | GO:0009539: photosystem II reaction center | 2.93E-03 |
| 34 | GO:0000922: spindle pole | 3.31E-03 |
| 35 | GO:0016324: apical plasma membrane | 4.12E-03 |
| 36 | GO:0031969: chloroplast membrane | 4.34E-03 |
| 37 | GO:0012511: monolayer-surrounded lipid storage body | 4.55E-03 |
| 38 | GO:0016021: integral component of membrane | 5.42E-03 |
| 39 | GO:0030076: light-harvesting complex | 6.41E-03 |
| 40 | GO:0005875: microtubule associated complex | 6.91E-03 |
| 41 | GO:0005840: ribosome | 1.04E-02 |
| 42 | GO:0009522: photosystem I | 1.26E-02 |
| 43 | GO:0005778: peroxisomal membrane | 1.67E-02 |
| 44 | GO:0005777: peroxisome | 1.76E-02 |
| 45 | GO:0009707: chloroplast outer membrane | 2.19E-02 |
| 46 | GO:0015934: large ribosomal subunit | 2.42E-02 |