GO Enrichment Analysis of Co-expressed Genes with
AT3G47000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 3 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 5 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 6 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 7 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 8 | GO:0005978: glycogen biosynthetic process | 2.62E-05 |
| 9 | GO:0010206: photosystem II repair | 4.19E-05 |
| 10 | GO:0044262: cellular carbohydrate metabolic process | 6.10E-05 |
| 11 | GO:0080093: regulation of photorespiration | 6.10E-05 |
| 12 | GO:0031998: regulation of fatty acid beta-oxidation | 6.10E-05 |
| 13 | GO:0010028: xanthophyll cycle | 6.10E-05 |
| 14 | GO:0000023: maltose metabolic process | 6.10E-05 |
| 15 | GO:0000025: maltose catabolic process | 6.10E-05 |
| 16 | GO:0005980: glycogen catabolic process | 6.10E-05 |
| 17 | GO:0005983: starch catabolic process | 8.59E-05 |
| 18 | GO:0016560: protein import into peroxisome matrix, docking | 1.48E-04 |
| 19 | GO:0005976: polysaccharide metabolic process | 1.48E-04 |
| 20 | GO:0090342: regulation of cell aging | 1.48E-04 |
| 21 | GO:0016122: xanthophyll metabolic process | 1.48E-04 |
| 22 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.48E-04 |
| 23 | GO:0006518: peptide metabolic process | 2.51E-04 |
| 24 | GO:0010623: programmed cell death involved in cell development | 2.51E-04 |
| 25 | GO:0016050: vesicle organization | 2.51E-04 |
| 26 | GO:0048281: inflorescence morphogenesis | 2.51E-04 |
| 27 | GO:0006000: fructose metabolic process | 2.51E-04 |
| 28 | GO:0008652: cellular amino acid biosynthetic process | 2.51E-04 |
| 29 | GO:0010731: protein glutathionylation | 3.65E-04 |
| 30 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 3.65E-04 |
| 31 | GO:1902358: sulfate transmembrane transport | 3.65E-04 |
| 32 | GO:0010148: transpiration | 3.65E-04 |
| 33 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 3.65E-04 |
| 34 | GO:0019252: starch biosynthetic process | 3.87E-04 |
| 35 | GO:0010021: amylopectin biosynthetic process | 4.88E-04 |
| 36 | GO:0015994: chlorophyll metabolic process | 4.88E-04 |
| 37 | GO:0010508: positive regulation of autophagy | 4.88E-04 |
| 38 | GO:0051205: protein insertion into membrane | 4.88E-04 |
| 39 | GO:0010027: thylakoid membrane organization | 5.92E-04 |
| 40 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.19E-04 |
| 41 | GO:0006097: glyoxylate cycle | 6.19E-04 |
| 42 | GO:0006461: protein complex assembly | 6.19E-04 |
| 43 | GO:0016120: carotene biosynthetic process | 6.19E-04 |
| 44 | GO:0015995: chlorophyll biosynthetic process | 6.93E-04 |
| 45 | GO:0010190: cytochrome b6f complex assembly | 7.57E-04 |
| 46 | GO:0000470: maturation of LSU-rRNA | 7.57E-04 |
| 47 | GO:0009913: epidermal cell differentiation | 7.57E-04 |
| 48 | GO:0009658: chloroplast organization | 8.00E-04 |
| 49 | GO:0070370: cellular heat acclimation | 1.05E-03 |
| 50 | GO:0010103: stomatal complex morphogenesis | 1.05E-03 |
| 51 | GO:0008272: sulfate transport | 1.05E-03 |
| 52 | GO:0015979: photosynthesis | 1.22E-03 |
| 53 | GO:0032544: plastid translation | 1.38E-03 |
| 54 | GO:0017004: cytochrome complex assembly | 1.38E-03 |
| 55 | GO:0006002: fructose 6-phosphate metabolic process | 1.38E-03 |
| 56 | GO:0009657: plastid organization | 1.38E-03 |
| 57 | GO:0001558: regulation of cell growth | 1.38E-03 |
| 58 | GO:0006783: heme biosynthetic process | 1.55E-03 |
| 59 | GO:0005982: starch metabolic process | 1.73E-03 |
| 60 | GO:0048829: root cap development | 1.92E-03 |
| 61 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.92E-03 |
| 62 | GO:0009750: response to fructose | 2.12E-03 |
| 63 | GO:0016485: protein processing | 2.12E-03 |
| 64 | GO:0010628: positive regulation of gene expression | 2.52E-03 |
| 65 | GO:0006108: malate metabolic process | 2.52E-03 |
| 66 | GO:0006094: gluconeogenesis | 2.52E-03 |
| 67 | GO:0005986: sucrose biosynthetic process | 2.52E-03 |
| 68 | GO:0010102: lateral root morphogenesis | 2.52E-03 |
| 69 | GO:0009266: response to temperature stimulus | 2.74E-03 |
| 70 | GO:0009735: response to cytokinin | 3.11E-03 |
| 71 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.42E-03 |
| 72 | GO:0051302: regulation of cell division | 3.65E-03 |
| 73 | GO:0006418: tRNA aminoacylation for protein translation | 3.65E-03 |
| 74 | GO:0035428: hexose transmembrane transport | 4.15E-03 |
| 75 | GO:0040007: growth | 4.40E-03 |
| 76 | GO:0001944: vasculature development | 4.40E-03 |
| 77 | GO:0009686: gibberellin biosynthetic process | 4.40E-03 |
| 78 | GO:0010089: xylem development | 4.65E-03 |
| 79 | GO:0016117: carotenoid biosynthetic process | 4.92E-03 |
| 80 | GO:0046323: glucose import | 5.46E-03 |
| 81 | GO:0048825: cotyledon development | 6.03E-03 |
| 82 | GO:0000302: response to reactive oxygen species | 6.32E-03 |
| 83 | GO:0030163: protein catabolic process | 6.91E-03 |
| 84 | GO:0055114: oxidation-reduction process | 7.62E-03 |
| 85 | GO:0016126: sterol biosynthetic process | 8.16E-03 |
| 86 | GO:0042742: defense response to bacterium | 8.51E-03 |
| 87 | GO:0045454: cell redox homeostasis | 9.00E-03 |
| 88 | GO:0016311: dephosphorylation | 9.47E-03 |
| 89 | GO:0009817: defense response to fungus, incompatible interaction | 9.82E-03 |
| 90 | GO:0048481: plant ovule development | 9.82E-03 |
| 91 | GO:0009834: plant-type secondary cell wall biogenesis | 1.05E-02 |
| 92 | GO:0048527: lateral root development | 1.09E-02 |
| 93 | GO:0034599: cellular response to oxidative stress | 1.20E-02 |
| 94 | GO:0006099: tricarboxylic acid cycle | 1.20E-02 |
| 95 | GO:0006631: fatty acid metabolic process | 1.31E-02 |
| 96 | GO:0009965: leaf morphogenesis | 1.51E-02 |
| 97 | GO:0009664: plant-type cell wall organization | 1.63E-02 |
| 98 | GO:0009740: gibberellic acid mediated signaling pathway | 2.11E-02 |
| 99 | GO:0009624: response to nematode | 2.20E-02 |
| 100 | GO:0009845: seed germination | 2.73E-02 |
| 101 | GO:0042744: hydrogen peroxide catabolic process | 2.83E-02 |
| 102 | GO:0009790: embryo development | 2.88E-02 |
| 103 | GO:0007623: circadian rhythm | 3.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 4 | GO:0016166: phytoene dehydrogenase activity | 0.00E+00 |
| 5 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0008236: serine-type peptidase activity | 3.90E-05 |
| 7 | GO:0004134: 4-alpha-glucanotransferase activity | 6.10E-05 |
| 8 | GO:0004645: phosphorylase activity | 6.10E-05 |
| 9 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 6.10E-05 |
| 10 | GO:0008184: glycogen phosphorylase activity | 6.10E-05 |
| 11 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 6.10E-05 |
| 12 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 6.10E-05 |
| 13 | GO:0004853: uroporphyrinogen decarboxylase activity | 6.10E-05 |
| 14 | GO:0010297: heteropolysaccharide binding | 1.48E-04 |
| 15 | GO:0004750: ribulose-phosphate 3-epimerase activity | 1.48E-04 |
| 16 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.48E-04 |
| 17 | GO:0008967: phosphoglycolate phosphatase activity | 1.48E-04 |
| 18 | GO:0018708: thiol S-methyltransferase activity | 1.48E-04 |
| 19 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.48E-04 |
| 20 | GO:0005528: FK506 binding | 1.63E-04 |
| 21 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 2.51E-04 |
| 22 | GO:0043169: cation binding | 2.51E-04 |
| 23 | GO:0002161: aminoacyl-tRNA editing activity | 2.51E-04 |
| 24 | GO:0004252: serine-type endopeptidase activity | 3.50E-04 |
| 25 | GO:0043023: ribosomal large subunit binding | 3.65E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 3.65E-04 |
| 27 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 4.88E-04 |
| 28 | GO:0042277: peptide binding | 4.88E-04 |
| 29 | GO:0004506: squalene monooxygenase activity | 4.88E-04 |
| 30 | GO:0019199: transmembrane receptor protein kinase activity | 4.88E-04 |
| 31 | GO:0004040: amidase activity | 6.19E-04 |
| 32 | GO:0016615: malate dehydrogenase activity | 7.57E-04 |
| 33 | GO:2001070: starch binding | 7.57E-04 |
| 34 | GO:0004130: cytochrome-c peroxidase activity | 7.57E-04 |
| 35 | GO:0004602: glutathione peroxidase activity | 9.01E-04 |
| 36 | GO:0051920: peroxiredoxin activity | 9.01E-04 |
| 37 | GO:0030060: L-malate dehydrogenase activity | 9.01E-04 |
| 38 | GO:0016209: antioxidant activity | 1.21E-03 |
| 39 | GO:0008271: secondary active sulfate transmembrane transporter activity | 1.38E-03 |
| 40 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.41E-03 |
| 41 | GO:0047372: acylglycerol lipase activity | 2.12E-03 |
| 42 | GO:0015386: potassium:proton antiporter activity | 2.12E-03 |
| 43 | GO:0015116: sulfate transmembrane transporter activity | 2.32E-03 |
| 44 | GO:0000049: tRNA binding | 2.32E-03 |
| 45 | GO:0015079: potassium ion transmembrane transporter activity | 3.65E-03 |
| 46 | GO:0004176: ATP-dependent peptidase activity | 3.89E-03 |
| 47 | GO:0004812: aminoacyl-tRNA ligase activity | 4.92E-03 |
| 48 | GO:0005355: glucose transmembrane transporter activity | 5.74E-03 |
| 49 | GO:0004601: peroxidase activity | 6.06E-03 |
| 50 | GO:0016597: amino acid binding | 7.84E-03 |
| 51 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.82E-03 |
| 52 | GO:0004222: metalloendopeptidase activity | 1.05E-02 |
| 53 | GO:0003746: translation elongation factor activity | 1.16E-02 |
| 54 | GO:0004364: glutathione transferase activity | 1.35E-02 |
| 55 | GO:0015293: symporter activity | 1.51E-02 |
| 56 | GO:0019843: rRNA binding | 2.58E-02 |
| 57 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.63E-02 |
| 58 | GO:0030170: pyridoxal phosphate binding | 2.78E-02 |
| 59 | GO:0015144: carbohydrate transmembrane transporter activity | 2.94E-02 |
| 60 | GO:0005351: sugar:proton symporter activity | 3.20E-02 |
| 61 | GO:0005525: GTP binding | 3.25E-02 |
| 62 | GO:0008168: methyltransferase activity | 4.31E-02 |
| 63 | GO:0000287: magnesium ion binding | 4.37E-02 |
| 64 | GO:0050660: flavin adenine dinucleotide binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0043233: organelle lumen | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 1.03E-22 |
| 5 | GO:0009534: chloroplast thylakoid | 4.82E-17 |
| 6 | GO:0009570: chloroplast stroma | 4.37E-16 |
| 7 | GO:0009941: chloroplast envelope | 1.87E-13 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 3.86E-13 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.71E-08 |
| 10 | GO:0031977: thylakoid lumen | 5.03E-08 |
| 11 | GO:0009579: thylakoid | 1.10E-05 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 1.98E-05 |
| 13 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 6.10E-05 |
| 14 | GO:0009508: plastid chromosome | 9.94E-05 |
| 15 | GO:0030095: chloroplast photosystem II | 1.14E-04 |
| 16 | GO:0005782: peroxisomal matrix | 2.51E-04 |
| 17 | GO:0010007: magnesium chelatase complex | 2.51E-04 |
| 18 | GO:0009509: chromoplast | 2.51E-04 |
| 19 | GO:0010319: stromule | 5.29E-04 |
| 20 | GO:0009295: nucleoid | 5.29E-04 |
| 21 | GO:0055035: plastid thylakoid membrane | 6.19E-04 |
| 22 | GO:0009501: amyloplast | 1.21E-03 |
| 23 | GO:0042644: chloroplast nucleoid | 1.55E-03 |
| 24 | GO:0009706: chloroplast inner membrane | 2.29E-03 |
| 25 | GO:0009523: photosystem II | 6.03E-03 |
| 26 | GO:0031969: chloroplast membrane | 7.51E-03 |
| 27 | GO:0009536: plastid | 1.10E-02 |
| 28 | GO:0031966: mitochondrial membrane | 1.63E-02 |
| 29 | GO:0005777: peroxisome | 2.27E-02 |
| 30 | GO:0010287: plastoglobule | 2.49E-02 |
| 31 | GO:0005623: cell | 2.63E-02 |
| 32 | GO:0016020: membrane | 2.69E-02 |
| 33 | GO:0048046: apoplast | 4.31E-02 |