co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G46930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
2	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
3	GO:2001142: nicotinate transport	0.00E+00
4	GO:0032497: detection of lipopolysaccharide	0.00E+00
5	GO:0042353: fucose biosynthetic process	0.00E+00
6	GO:0034775: glutathione transmembrane transport	0.00E+00
7	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
8	GO:0046967: cytosol to ER transport	0.00E+00
9	GO:0032499: detection of peptidoglycan	0.00E+00
10	GO:2001143: N-methylnicotinate transport	0.00E+00
11	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
12	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
13	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
14	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
15	GO:0010200: response to chitin	1.37E-14
16	GO:0006468: protein phosphorylation	6.19E-10
17	GO:0002679: respiratory burst involved in defense response	3.78E-07
18	GO:0051865: protein autoubiquitination	7.34E-07
19	GO:0006470: protein dephosphorylation	2.51E-06
20	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.00E-06
21	GO:0006955: immune response	1.27E-05
22	GO:0046777: protein autophosphorylation	2.05E-05
23	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	2.78E-05
24	GO:0033014: tetrapyrrole biosynthetic process	6.06E-05
25	GO:0009611: response to wounding	7.39E-05
26	GO:0042742: defense response to bacterium	1.65E-04
27	GO:0007166: cell surface receptor signaling pathway	1.77E-04
28	GO:0010337: regulation of salicylic acid metabolic process	2.34E-04
29	GO:0006751: glutathione catabolic process	2.34E-04
30	GO:0010555: response to mannitol	3.15E-04
31	GO:2000067: regulation of root morphogenesis	3.15E-04
32	GO:0045087: innate immune response	3.48E-04
33	GO:0051180: vitamin transport	4.26E-04
34	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.26E-04
35	GO:0007229: integrin-mediated signaling pathway	4.26E-04
36	GO:0030974: thiamine pyrophosphate transport	4.26E-04
37	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	4.26E-04
38	GO:0080157: regulation of plant-type cell wall organization or biogenesis	4.26E-04
39	GO:0050691: regulation of defense response to virus by host	4.26E-04
40	GO:0006680: glucosylceramide catabolic process	4.26E-04
41	GO:0032491: detection of molecule of fungal origin	4.26E-04
42	GO:1900384: regulation of flavonol biosynthetic process	4.26E-04
43	GO:0045010: actin nucleation	5.08E-04
44	GO:0007186: G-protein coupled receptor signaling pathway	6.20E-04
45	GO:0048544: recognition of pollen	6.32E-04
46	GO:0009749: response to glucose	6.92E-04
47	GO:0006783: heme biosynthetic process	7.43E-04
48	GO:0002229: defense response to oomycetes	7.53E-04
49	GO:0006952: defense response	7.58E-04
50	GO:0010372: positive regulation of gibberellin biosynthetic process	9.21E-04
51	GO:0015893: drug transport	9.21E-04
52	GO:0052542: defense response by callose deposition	9.21E-04
53	GO:0046939: nucleotide phosphorylation	9.21E-04
54	GO:0010155: regulation of proton transport	9.21E-04
55	GO:0009617: response to bacterium	9.56E-04
56	GO:0009738: abscisic acid-activated signaling pathway	1.01E-03
57	GO:0007064: mitotic sister chromatid cohesion	1.02E-03
58	GO:0009750: response to fructose	1.17E-03
59	GO:0009620: response to fungus	1.22E-03
60	GO:0080168: abscisic acid transport	1.50E-03
61	GO:0006598: polyamine catabolic process	1.50E-03
62	GO:0002230: positive regulation of defense response to virus by host	1.50E-03
63	GO:0006011: UDP-glucose metabolic process	1.50E-03
64	GO:0010447: response to acidic pH	1.50E-03
65	GO:0009737: response to abscisic acid	1.50E-03
66	GO:0055046: microgametogenesis	1.52E-03
67	GO:0008219: cell death	1.67E-03
68	GO:0034605: cellular response to heat	1.72E-03
69	GO:0002237: response to molecule of bacterial origin	1.72E-03
70	GO:0070588: calcium ion transmembrane transport	1.92E-03
71	GO:0043207: response to external biotic stimulus	2.17E-03
72	GO:0009226: nucleotide-sugar biosynthetic process	2.17E-03
73	GO:0030100: regulation of endocytosis	2.17E-03
74	GO:0009399: nitrogen fixation	2.17E-03
75	GO:0071323: cellular response to chitin	2.17E-03
76	GO:0006986: response to unfolded protein	2.17E-03
77	GO:0009863: salicylic acid mediated signaling pathway	2.38E-03
78	GO:0009695: jasmonic acid biosynthetic process	2.63E-03
79	GO:0045727: positive regulation of translation	2.91E-03
80	GO:0010107: potassium ion import	2.91E-03
81	GO:0071219: cellular response to molecule of bacterial origin	2.91E-03
82	GO:0033356: UDP-L-arabinose metabolic process	2.91E-03
83	GO:0034440: lipid oxidation	2.91E-03
84	GO:1902347: response to strigolactone	2.91E-03
85	GO:0015743: malate transport	2.91E-03
86	GO:0009652: thigmotropism	2.91E-03
87	GO:0051707: response to other organism	3.13E-03
88	GO:0009686: gibberellin biosynthetic process	3.45E-03
89	GO:0009555: pollen development	3.66E-03
90	GO:0009164: nucleoside catabolic process	3.73E-03
91	GO:0030041: actin filament polymerization	3.73E-03
92	GO:0045487: gibberellin catabolic process	3.73E-03
93	GO:0010118: stomatal movement	4.40E-03
94	GO:0048317: seed morphogenesis	4.61E-03
95	GO:0047484: regulation of response to osmotic stress	4.61E-03
96	GO:0006828: manganese ion transport	4.61E-03
97	GO:1900425: negative regulation of defense response to bacterium	4.61E-03
98	GO:0010942: positive regulation of cell death	4.61E-03
99	GO:0015691: cadmium ion transport	4.61E-03
100	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	4.61E-03
101	GO:0010256: endomembrane system organization	4.61E-03
102	GO:0009651: response to salt stress	5.23E-03
103	GO:1901001: negative regulation of response to salt stress	5.57E-03
104	GO:0080086: stamen filament development	5.57E-03
105	GO:0016310: phosphorylation	5.70E-03
106	GO:0010193: response to ozone	5.86E-03
107	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	6.58E-03
108	GO:0070370: cellular heat acclimation	6.58E-03
109	GO:1900057: positive regulation of leaf senescence	6.58E-03
110	GO:0010044: response to aluminum ion	6.58E-03
111	GO:0010161: red light signaling pathway	6.58E-03
112	GO:0009639: response to red or far red light	7.11E-03
113	GO:0006402: mRNA catabolic process	7.65E-03
114	GO:1900150: regulation of defense response to fungus	7.65E-03
115	GO:2000070: regulation of response to water deprivation	7.65E-03
116	GO:0009742: brassinosteroid mediated signaling pathway	7.76E-03
117	GO:0009615: response to virus	8.49E-03
118	GO:0060321: acceptance of pollen	8.79E-03
119	GO:0048193: Golgi vesicle transport	8.79E-03
120	GO:0030968: endoplasmic reticulum unfolded protein response	8.79E-03
121	GO:0009932: cell tip growth	8.79E-03
122	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	8.98E-03
123	GO:0009816: defense response to bacterium, incompatible interaction	8.98E-03
124	GO:0090305: nucleic acid phosphodiester bond hydrolysis	9.98E-03
125	GO:0090333: regulation of stomatal closure	9.98E-03
126	GO:0098656: anion transmembrane transport	9.98E-03
127	GO:0015995: chlorophyll biosynthetic process	1.00E-02
128	GO:0009845: seed germination	1.06E-02
129	GO:2000280: regulation of root development	1.12E-02
130	GO:0010018: far-red light signaling pathway	1.12E-02
131	GO:0008202: steroid metabolic process	1.12E-02
132	GO:0006779: porphyrin-containing compound biosynthetic process	1.12E-02
133	GO:0006782: protoporphyrinogen IX biosynthetic process	1.25E-02
134	GO:0019538: protein metabolic process	1.25E-02
135	GO:0048829: root cap development	1.25E-02
136	GO:0035556: intracellular signal transduction	1.31E-02
137	GO:0046686: response to cadmium ion	1.31E-02
138	GO:0006816: calcium ion transport	1.39E-02
139	GO:0072593: reactive oxygen species metabolic process	1.39E-02
140	GO:0015770: sucrose transport	1.39E-02
141	GO:1903507: negative regulation of nucleic acid-templated transcription	1.39E-02
142	GO:0030148: sphingolipid biosynthetic process	1.39E-02
143	GO:0010015: root morphogenesis	1.39E-02
144	GO:0006979: response to oxidative stress	1.47E-02
145	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.53E-02
146	GO:0006839: mitochondrial transport	1.61E-02
147	GO:0048467: gynoecium development	1.82E-02
148	GO:0009744: response to sucrose	1.82E-02
149	GO:0080188: RNA-directed DNA methylation	1.98E-02
150	GO:0009901: anther dehiscence	1.98E-02
151	GO:0005985: sucrose metabolic process	1.98E-02
152	GO:0071732: cellular response to nitric oxide	1.98E-02
153	GO:0046854: phosphatidylinositol phosphorylation	1.98E-02
154	GO:0009969: xyloglucan biosynthetic process	1.98E-02
155	GO:0042753: positive regulation of circadian rhythm	2.14E-02
156	GO:0034976: response to endoplasmic reticulum stress	2.14E-02
157	GO:0031347: regulation of defense response	2.21E-02
158	GO:0006874: cellular calcium ion homeostasis	2.47E-02
159	GO:0031408: oxylipin biosynthetic process	2.64E-02
160	GO:0016998: cell wall macromolecule catabolic process	2.64E-02
161	GO:0098542: defense response to other organism	2.64E-02
162	GO:0006970: response to osmotic stress	2.76E-02
163	GO:0016226: iron-sulfur cluster assembly	2.82E-02
164	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.82E-02
165	GO:0030433: ubiquitin-dependent ERAD pathway	2.82E-02
166	GO:0030245: cellulose catabolic process	2.82E-02
167	GO:0006810: transport	2.99E-02
168	GO:0071215: cellular response to abscisic acid stimulus	3.00E-02
169	GO:0071369: cellular response to ethylene stimulus	3.00E-02
170	GO:0040007: growth	3.00E-02
171	GO:0048366: leaf development	3.08E-02
172	GO:0009626: plant-type hypersensitive response	3.10E-02
173	GO:0006817: phosphate ion transport	3.18E-02
174	GO:0019722: calcium-mediated signaling	3.18E-02
175	GO:0009306: protein secretion	3.18E-02
176	GO:0010089: xylem development	3.18E-02
177	GO:0080167: response to karrikin	3.29E-02
178	GO:0042147: retrograde transport, endosome to Golgi	3.37E-02
179	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.43E-02
180	GO:0042631: cellular response to water deprivation	3.56E-02
181	GO:0048653: anther development	3.56E-02
182	GO:0018105: peptidyl-serine phosphorylation	3.61E-02
183	GO:0009960: endosperm development	3.75E-02
184	GO:0006814: sodium ion transport	3.95E-02
185	GO:0000398: mRNA splicing, via spliceosome	4.04E-02
186	GO:0006891: intra-Golgi vesicle-mediated transport	4.36E-02
187	GO:0045893: positive regulation of transcription, DNA-templated	4.49E-02
188	GO:0031047: gene silencing by RNA	4.57E-02
189	GO:0016032: viral process	4.57E-02
190	GO:0009630: gravitropism	4.57E-02
191	GO:0071281: cellular response to iron ion	4.78E-02
192	GO:1901657: glycosyl compound metabolic process	4.78E-02
193	GO:0019760: glucosinolate metabolic process	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005522: profilin binding	0.00E+00
2	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
3	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
4	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
5	GO:2001080: chitosan binding	0.00E+00
6	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
7	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
8	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
9	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
10	GO:0090416: nicotinate transporter activity	0.00E+00
11	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
12	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
13	GO:0016301: kinase activity	4.31E-11
14	GO:0004674: protein serine/threonine kinase activity	4.23E-08
15	GO:0005524: ATP binding	6.95E-07
16	GO:0004672: protein kinase activity	9.21E-06
17	GO:0003840: gamma-glutamyltransferase activity	2.78E-05
18	GO:0036374: glutathione hydrolase activity	2.78E-05
19	GO:0031683: G-protein beta/gamma-subunit complex binding	2.78E-05
20	GO:0001664: G-protein coupled receptor binding	2.78E-05
21	GO:0004722: protein serine/threonine phosphatase activity	4.03E-05
22	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	6.06E-05
23	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.09E-04
24	GO:0005516: calmodulin binding	2.48E-04
25	GO:0102425: myricetin 3-O-glucosyltransferase activity	4.06E-04
26	GO:0102360: daphnetin 3-O-glucosyltransferase activity	4.06E-04
27	GO:0015085: calcium ion transmembrane transporter activity	4.26E-04
28	GO:0004348: glucosylceramidase activity	4.26E-04
29	GO:0004325: ferrochelatase activity	4.26E-04
30	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	4.26E-04
31	GO:0090440: abscisic acid transporter activity	4.26E-04
32	GO:0052894: norspermine:oxygen oxidoreductase activity	4.26E-04
33	GO:0090422: thiamine pyrophosphate transporter activity	4.26E-04
34	GO:0047893: flavonol 3-O-glucosyltransferase activity	5.08E-04
35	GO:1990585: hydroxyproline O-arabinosyltransferase activity	9.21E-04
36	GO:0004103: choline kinase activity	9.21E-04
37	GO:0008883: glutamyl-tRNA reductase activity	9.21E-04
38	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	9.21E-04
39	GO:0004721: phosphoprotein phosphatase activity	1.47E-03
40	GO:0004758: serine C-palmitoyltransferase activity	1.50E-03
41	GO:0046423: allene-oxide cyclase activity	1.50E-03
42	GO:0004383: guanylate cyclase activity	1.50E-03
43	GO:0016165: linoleate 13S-lipoxygenase activity	1.50E-03
44	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	1.50E-03
45	GO:0046592: polyamine oxidase activity	1.50E-03
46	GO:0005388: calcium-transporting ATPase activity	1.52E-03
47	GO:0019888: protein phosphatase regulator activity	1.52E-03
48	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.02E-03
49	GO:0030246: carbohydrate binding	2.08E-03
50	GO:0019201: nucleotide kinase activity	2.17E-03
51	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.17E-03
52	GO:0001653: peptide receptor activity	2.17E-03
53	GO:0005432: calcium:sodium antiporter activity	2.17E-03
54	GO:0004715: non-membrane spanning protein tyrosine kinase activity	2.17E-03
55	GO:0035251: UDP-glucosyltransferase activity	2.89E-03
56	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.89E-03
57	GO:0043015: gamma-tubulin binding	2.91E-03
58	GO:0019199: transmembrane receptor protein kinase activity	2.91E-03
59	GO:0005253: anion channel activity	2.91E-03
60	GO:0004659: prenyltransferase activity	2.91E-03
61	GO:0015368: calcium:cation antiporter activity	2.91E-03
62	GO:0015369: calcium:proton antiporter activity	2.91E-03
63	GO:0004842: ubiquitin-protein transferase activity	3.70E-03
64	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	3.73E-03
65	GO:0018685: alkane 1-monooxygenase activity	3.73E-03
66	GO:0047631: ADP-ribose diphosphatase activity	3.73E-03
67	GO:0002020: protease binding	3.73E-03
68	GO:0004356: glutamate-ammonia ligase activity	3.73E-03
69	GO:0008514: organic anion transmembrane transporter activity	3.75E-03
70	GO:0000210: NAD+ diphosphatase activity	4.61E-03
71	GO:0035673: oligopeptide transmembrane transporter activity	4.61E-03
72	GO:0019901: protein kinase binding	5.47E-03
73	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	5.57E-03
74	GO:0004017: adenylate kinase activity	5.57E-03
75	GO:0003950: NAD+ ADP-ribosyltransferase activity	5.57E-03
76	GO:0019900: kinase binding	5.57E-03
77	GO:0051020: GTPase binding	5.57E-03
78	GO:0015140: malate transmembrane transporter activity	6.58E-03
79	GO:0008143: poly(A) binding	6.58E-03
80	GO:0004143: diacylglycerol kinase activity	6.58E-03
81	GO:0008506: sucrose:proton symporter activity	6.58E-03
82	GO:0003779: actin binding	6.93E-03
83	GO:0043565: sequence-specific DNA binding	7.22E-03
84	GO:0046872: metal ion binding	7.48E-03
85	GO:0015491: cation:cation antiporter activity	7.65E-03
86	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.65E-03
87	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	8.79E-03
88	GO:0004430: 1-phosphatidylinositol 4-kinase activity	8.79E-03
89	GO:0003951: NAD+ kinase activity	8.79E-03
90	GO:0008142: oxysterol binding	8.79E-03
91	GO:0004630: phospholipase D activity	8.79E-03
92	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.49E-03
93	GO:0004806: triglyceride lipase activity	1.00E-02
94	GO:0004683: calmodulin-dependent protein kinase activity	1.00E-02
95	GO:0047617: acyl-CoA hydrolase activity	1.12E-02
96	GO:0015144: carbohydrate transmembrane transporter activity	1.21E-02
97	GO:0004713: protein tyrosine kinase activity	1.25E-02
98	GO:0008515: sucrose transmembrane transporter activity	1.39E-02
99	GO:0005351: sugar:proton symporter activity	1.41E-02
100	GO:0015198: oligopeptide transporter activity	1.53E-02
101	GO:0005315: inorganic phosphate transmembrane transporter activity	1.67E-02
102	GO:0009055: electron carrier activity	1.75E-02
103	GO:0008131: primary amine oxidase activity	1.82E-02
104	GO:0035091: phosphatidylinositol binding	1.97E-02
105	GO:0008061: chitin binding	1.98E-02
106	GO:0004970: ionotropic glutamate receptor activity	1.98E-02
107	GO:0005217: intracellular ligand-gated ion channel activity	1.98E-02
108	GO:0004725: protein tyrosine phosphatase activity	2.14E-02
109	GO:0003714: transcription corepressor activity	2.30E-02
110	GO:0033612: receptor serine/threonine kinase binding	2.64E-02
111	GO:0008408: 3'-5' exonuclease activity	2.64E-02
112	GO:0031625: ubiquitin protein ligase binding	2.73E-02
113	GO:0022891: substrate-specific transmembrane transporter activity	3.00E-02
114	GO:0050660: flavin adenine dinucleotide binding	3.02E-02
115	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.20E-02
116	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.20E-02
117	GO:0005509: calcium ion binding	3.44E-02
118	GO:0003713: transcription coactivator activity	3.75E-02
119	GO:0044212: transcription regulatory region DNA binding	3.93E-02
120	GO:0016853: isomerase activity	3.95E-02
121	GO:0016758: transferase activity, transferring hexosyl groups	4.26E-02
122	GO:0004518: nuclease activity	4.57E-02
123	GO:0051015: actin filament binding	4.78E-02
124	GO:0016791: phosphatase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.70E-12
2	GO:0016021: integral component of membrane	5.69E-05
3	GO:0016363: nuclear matrix	3.15E-04
4	GO:0005911: cell-cell junction	4.26E-04
5	GO:0016442: RISC complex	4.26E-04
6	GO:0019008: molybdopterin synthase complex	4.26E-04
7	GO:0090406: pollen tube	5.21E-04
8	GO:0010494: cytoplasmic stress granule	7.43E-04
9	GO:0000159: protein phosphatase type 2A complex	1.17E-03
10	GO:0048471: perinuclear region of cytoplasm	1.17E-03
11	GO:0070062: extracellular exosome	2.17E-03
12	GO:0030173: integral component of Golgi membrane	5.57E-03
13	GO:0010008: endosome membrane	5.92E-03
14	GO:0000145: exocyst	6.26E-03
15	GO:0012505: endomembrane system	6.93E-03
16	GO:0015030: Cajal body	1.12E-02
17	GO:0005768: endosome	1.18E-02
18	GO:0090404: pollen tube tip	1.39E-02
19	GO:0071013: catalytic step 2 spliceosome	1.39E-02
20	GO:0009506: plasmodesma	1.39E-02
21	GO:0031902: late endosome membrane	1.68E-02
22	GO:0005783: endoplasmic reticulum	1.72E-02
23	GO:0043231: intracellular membrane-bounded organelle	1.83E-02
24	GO:0043234: protein complex	2.14E-02
25	GO:0005634: nucleus	2.21E-02
26	GO:0005758: mitochondrial intermembrane space	2.30E-02
27	GO:0005737: cytoplasm	2.44E-02
28	GO:0005635: nuclear envelope	2.64E-02
29	GO:0005834: heterotrimeric G-protein complex	3.10E-02
30	GO:0030136: clathrin-coated vesicle	3.37E-02
31	GO:0005770: late endosome	3.75E-02
32	GO:0032580: Golgi cisterna membrane	4.99E-02