GO Enrichment Analysis of Co-expressed Genes with
AT3G46040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006412: translation | 2.00E-55 |
| 2 | GO:0042254: ribosome biogenesis | 6.76E-28 |
| 3 | GO:0000027: ribosomal large subunit assembly | 1.35E-08 |
| 4 | GO:0000028: ribosomal small subunit assembly | 2.56E-06 |
| 5 | GO:1902626: assembly of large subunit precursor of preribosome | 6.40E-06 |
| 6 | GO:0006626: protein targeting to mitochondrion | 1.94E-05 |
| 7 | GO:0045040: protein import into mitochondrial outer membrane | 6.48E-05 |
| 8 | GO:0009965: leaf morphogenesis | 8.88E-05 |
| 9 | GO:0009955: adaxial/abaxial pattern specification | 9.02E-05 |
| 10 | GO:0006414: translational elongation | 1.76E-04 |
| 11 | GO:2001006: regulation of cellulose biosynthetic process | 1.91E-04 |
| 12 | GO:0009245: lipid A biosynthetic process | 2.33E-04 |
| 13 | GO:0000387: spliceosomal snRNP assembly | 2.78E-04 |
| 14 | GO:0045905: positive regulation of translational termination | 4.29E-04 |
| 15 | GO:0071668: plant-type cell wall assembly | 4.29E-04 |
| 16 | GO:0045901: positive regulation of translational elongation | 4.29E-04 |
| 17 | GO:0006452: translational frameshifting | 4.29E-04 |
| 18 | GO:0002181: cytoplasmic translation | 6.99E-04 |
| 19 | GO:0034227: tRNA thio-modification | 6.99E-04 |
| 20 | GO:0090506: axillary shoot meristem initiation | 6.99E-04 |
| 21 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 9.97E-04 |
| 22 | GO:2000032: regulation of secondary shoot formation | 1.32E-03 |
| 23 | GO:0015991: ATP hydrolysis coupled proton transport | 1.38E-03 |
| 24 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.68E-03 |
| 25 | GO:0000398: mRNA splicing, via spliceosome | 1.93E-03 |
| 26 | GO:0001731: formation of translation preinitiation complex | 2.07E-03 |
| 27 | GO:0043248: proteasome assembly | 2.07E-03 |
| 28 | GO:0000911: cytokinesis by cell plate formation | 2.49E-03 |
| 29 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 2.49E-03 |
| 30 | GO:0098655: cation transmembrane transport | 2.49E-03 |
| 31 | GO:0032880: regulation of protein localization | 2.93E-03 |
| 32 | GO:0006506: GPI anchor biosynthetic process | 3.40E-03 |
| 33 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.72E-03 |
| 34 | GO:0009808: lignin metabolic process | 3.88E-03 |
| 35 | GO:0048589: developmental growth | 4.40E-03 |
| 36 | GO:0008283: cell proliferation | 5.57E-03 |
| 37 | GO:0000209: protein polyubiquitination | 5.79E-03 |
| 38 | GO:0010015: root morphogenesis | 6.06E-03 |
| 39 | GO:0006913: nucleocytoplasmic transport | 6.06E-03 |
| 40 | GO:0016925: protein sumoylation | 6.66E-03 |
| 41 | GO:0010102: lateral root morphogenesis | 7.28E-03 |
| 42 | GO:0006446: regulation of translational initiation | 7.91E-03 |
| 43 | GO:0048467: gynoecium development | 7.91E-03 |
| 44 | GO:0010039: response to iron ion | 8.57E-03 |
| 45 | GO:0034976: response to endoplasmic reticulum stress | 9.25E-03 |
| 46 | GO:0006487: protein N-linked glycosylation | 9.94E-03 |
| 47 | GO:0030150: protein import into mitochondrial matrix | 9.94E-03 |
| 48 | GO:0006406: mRNA export from nucleus | 9.94E-03 |
| 49 | GO:0006511: ubiquitin-dependent protein catabolic process | 9.97E-03 |
| 50 | GO:0061077: chaperone-mediated protein folding | 1.14E-02 |
| 51 | GO:0007005: mitochondrion organization | 1.21E-02 |
| 52 | GO:0016226: iron-sulfur cluster assembly | 1.21E-02 |
| 53 | GO:0010089: xylem development | 1.37E-02 |
| 54 | GO:0000413: protein peptidyl-prolyl isomerization | 1.53E-02 |
| 55 | GO:0006633: fatty acid biosynthetic process | 1.69E-02 |
| 56 | GO:0009630: gravitropism | 1.97E-02 |
| 57 | GO:0010090: trichome morphogenesis | 2.06E-02 |
| 58 | GO:0010252: auxin homeostasis | 2.15E-02 |
| 59 | GO:0010286: heat acclimation | 2.25E-02 |
| 60 | GO:0015031: protein transport | 2.60E-02 |
| 61 | GO:0009910: negative regulation of flower development | 3.27E-02 |
| 62 | GO:0000724: double-strand break repair via homologous recombination | 3.38E-02 |
| 63 | GO:0009853: photorespiration | 3.49E-02 |
| 64 | GO:0016192: vesicle-mediated transport | 3.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 2.55E-77 |
| 2 | GO:0003729: mRNA binding | 6.01E-13 |
| 3 | GO:0019843: rRNA binding | 2.19E-06 |
| 4 | GO:0008097: 5S rRNA binding | 1.47E-05 |
| 5 | GO:0031177: phosphopantetheine binding | 6.48E-05 |
| 6 | GO:0000035: acyl binding | 9.02E-05 |
| 7 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.53E-04 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.84E-04 |
| 9 | GO:0004750: ribulose-phosphate 3-epimerase activity | 4.29E-04 |
| 10 | GO:0070181: small ribosomal subunit rRNA binding | 6.99E-04 |
| 11 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.71E-04 |
| 12 | GO:0004298: threonine-type endopeptidase activity | 9.21E-04 |
| 13 | GO:0022890: inorganic cation transmembrane transporter activity | 9.97E-04 |
| 14 | GO:0004576: oligosaccharyl transferase activity | 1.32E-03 |
| 15 | GO:0005496: steroid binding | 1.68E-03 |
| 16 | GO:0031386: protein tag | 1.68E-03 |
| 17 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.68E-03 |
| 18 | GO:0043022: ribosome binding | 3.40E-03 |
| 19 | GO:0015078: hydrogen ion transmembrane transporter activity | 3.88E-03 |
| 20 | GO:0003746: translation elongation factor activity | 4.33E-03 |
| 21 | GO:0001055: RNA polymerase II activity | 4.93E-03 |
| 22 | GO:0001054: RNA polymerase I activity | 6.06E-03 |
| 23 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 6.06E-03 |
| 24 | GO:0001056: RNA polymerase III activity | 6.66E-03 |
| 25 | GO:0015266: protein channel activity | 7.28E-03 |
| 26 | GO:0031625: ubiquitin protein ligase binding | 8.31E-03 |
| 27 | GO:0005528: FK506 binding | 9.94E-03 |
| 28 | GO:0003756: protein disulfide isomerase activity | 1.37E-02 |
| 29 | GO:0008080: N-acetyltransferase activity | 1.62E-02 |
| 30 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.88E-02 |
| 31 | GO:0003743: translation initiation factor activity | 2.17E-02 |
| 32 | GO:0050897: cobalt ion binding | 3.27E-02 |
| 33 | GO:0008233: peptidase activity | 3.50E-02 |
| 34 | GO:0061630: ubiquitin protein ligase activity | 3.74E-02 |
| 35 | GO:0005198: structural molecule activity | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0097361: CIA complex | 0.00E+00 |
| 3 | GO:0005840: ribosome | 9.21E-61 |
| 4 | GO:0022626: cytosolic ribosome | 1.69E-53 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 5.07E-47 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 9.97E-29 |
| 7 | GO:0005829: cytosol | 7.00E-23 |
| 8 | GO:0005737: cytoplasm | 6.75E-18 |
| 9 | GO:0005730: nucleolus | 3.32E-17 |
| 10 | GO:0009506: plasmodesma | 3.20E-08 |
| 11 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.44E-06 |
| 12 | GO:0005774: vacuolar membrane | 9.17E-06 |
| 13 | GO:0005618: cell wall | 1.71E-05 |
| 14 | GO:0016020: membrane | 1.90E-05 |
| 15 | GO:0000502: proteasome complex | 1.23E-04 |
| 16 | GO:0072546: ER membrane protein complex | 1.91E-04 |
| 17 | GO:0005742: mitochondrial outer membrane translocase complex | 1.91E-04 |
| 18 | GO:0019774: proteasome core complex, beta-subunit complex | 1.91E-04 |
| 19 | GO:0005773: vacuole | 2.22E-04 |
| 20 | GO:0071011: precatalytic spliceosome | 2.78E-04 |
| 21 | GO:0071013: catalytic step 2 spliceosome | 3.78E-04 |
| 22 | GO:0015934: large ribosomal subunit | 4.64E-04 |
| 23 | GO:0019013: viral nucleocapsid | 4.93E-04 |
| 24 | GO:0034719: SMN-Sm protein complex | 6.99E-04 |
| 25 | GO:0005838: proteasome regulatory particle | 6.99E-04 |
| 26 | GO:0005853: eukaryotic translation elongation factor 1 complex | 6.99E-04 |
| 27 | GO:0005758: mitochondrial intermembrane space | 7.65E-04 |
| 28 | GO:0070469: respiratory chain | 8.41E-04 |
| 29 | GO:0005839: proteasome core complex | 9.21E-04 |
| 30 | GO:0015935: small ribosomal subunit | 9.21E-04 |
| 31 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 9.97E-04 |
| 32 | GO:1990726: Lsm1-7-Pat1 complex | 9.97E-04 |
| 33 | GO:0033179: proton-transporting V-type ATPase, V0 domain | 1.32E-03 |
| 34 | GO:0005682: U5 snRNP | 1.32E-03 |
| 35 | GO:0005687: U4 snRNP | 1.68E-03 |
| 36 | GO:0097526: spliceosomal tri-snRNP complex | 1.68E-03 |
| 37 | GO:0008250: oligosaccharyltransferase complex | 1.68E-03 |
| 38 | GO:0005771: multivesicular body | 2.07E-03 |
| 39 | GO:0016282: eukaryotic 43S preinitiation complex | 2.07E-03 |
| 40 | GO:0033290: eukaryotic 48S preinitiation complex | 2.49E-03 |
| 41 | GO:0005689: U12-type spliceosomal complex | 2.49E-03 |
| 42 | GO:0071004: U2-type prespliceosome | 3.40E-03 |
| 43 | GO:0005688: U6 snRNP | 3.40E-03 |
| 44 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.88E-03 |
| 45 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.88E-03 |
| 46 | GO:0005736: DNA-directed RNA polymerase I complex | 4.40E-03 |
| 47 | GO:0005685: U1 snRNP | 4.40E-03 |
| 48 | GO:0031901: early endosome membrane | 4.40E-03 |
| 49 | GO:0005666: DNA-directed RNA polymerase III complex | 4.93E-03 |
| 50 | GO:0005686: U2 snRNP | 5.48E-03 |
| 51 | GO:0005886: plasma membrane | 5.77E-03 |
| 52 | GO:0008541: proteasome regulatory particle, lid subcomplex | 6.06E-03 |
| 53 | GO:0005665: DNA-directed RNA polymerase II, core complex | 6.66E-03 |
| 54 | GO:0031307: integral component of mitochondrial outer membrane | 6.66E-03 |
| 55 | GO:0005795: Golgi stack | 8.57E-03 |
| 56 | GO:0005681: spliceosomal complex | 8.88E-03 |
| 57 | GO:0005747: mitochondrial respiratory chain complex I | 9.17E-03 |
| 58 | GO:0000419: DNA-directed RNA polymerase V complex | 9.25E-03 |
| 59 | GO:0005769: early endosome | 9.25E-03 |
| 60 | GO:0005783: endoplasmic reticulum | 1.00E-02 |
| 61 | GO:0045271: respiratory chain complex I | 1.07E-02 |
| 62 | GO:0005741: mitochondrial outer membrane | 1.14E-02 |
| 63 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.37E-02 |
| 64 | GO:0005759: mitochondrial matrix | 1.69E-02 |
| 65 | GO:0000932: P-body | 2.44E-02 |
| 66 | GO:0005788: endoplasmic reticulum lumen | 2.54E-02 |
| 67 | GO:0005743: mitochondrial inner membrane | 4.86E-02 |
| 68 | GO:0031966: mitochondrial membrane | 4.90E-02 |