Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G45090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032499: detection of peptidoglycan0.00E+00
2GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
3GO:0034263: positive regulation of autophagy in response to ER overload0.00E+00
4GO:0019481: L-alanine catabolic process, by transamination0.00E+00
5GO:0034628: 'de novo' NAD biosynthetic process from aspartate2.53E-05
6GO:0032491: detection of molecule of fungal origin2.53E-05
7GO:0009408: response to heat3.04E-05
8GO:0009742: brassinosteroid mediated signaling pathway4.74E-05
9GO:0010372: positive regulation of gibberellin biosynthetic process6.44E-05
10GO:0046686: response to cadmium ion7.77E-05
11GO:0051176: positive regulation of sulfur metabolic process1.13E-04
12GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation1.13E-04
13GO:0006986: response to unfolded protein1.69E-04
14GO:0009399: nitrogen fixation1.69E-04
15GO:0033014: tetrapyrrole biosynthetic process1.69E-04
16GO:0071323: cellular response to chitin1.69E-04
17GO:0009816: defense response to bacterium, incompatible interaction2.04E-04
18GO:0015743: malate transport2.30E-04
19GO:0071219: cellular response to molecule of bacterial origin2.30E-04
20GO:0009435: NAD biosynthetic process2.95E-04
21GO:0030041: actin filament polymerization2.95E-04
22GO:0006468: protein phosphorylation3.45E-04
23GO:0006014: D-ribose metabolic process3.65E-04
24GO:0048317: seed morphogenesis3.65E-04
25GO:0045010: actin nucleation5.89E-04
26GO:0048658: anther wall tapetum development5.89E-04
27GO:0006402: mRNA catabolic process5.89E-04
28GO:0030968: endoplasmic reticulum unfolded protein response6.69E-04
29GO:0009060: aerobic respiration7.52E-04
30GO:0046685: response to arsenic-containing substance7.52E-04
31GO:0006783: heme biosynthetic process7.52E-04
32GO:0008202: steroid metabolic process8.38E-04
33GO:0006779: porphyrin-containing compound biosynthetic process8.38E-04
34GO:0048829: root cap development9.24E-04
35GO:0006782: protoporphyrinogen IX biosynthetic process9.24E-04
36GO:0009737: response to abscisic acid9.48E-04
37GO:0034605: cellular response to heat1.30E-03
38GO:0007166: cell surface receptor signaling pathway1.48E-03
39GO:0061077: chaperone-mediated protein folding1.83E-03
40GO:0016226: iron-sulfur cluster assembly1.95E-03
41GO:0030433: ubiquitin-dependent ERAD pathway1.95E-03
42GO:0042742: defense response to bacterium2.02E-03
43GO:0009686: gibberellin biosynthetic process2.06E-03
44GO:0009306: protein secretion2.18E-03
45GO:0010200: response to chitin2.54E-03
46GO:0009960: endosperm development2.55E-03
47GO:0048544: recognition of pollen2.68E-03
48GO:0019252: starch biosynthetic process2.80E-03
49GO:0009749: response to glucose2.80E-03
50GO:0002229: defense response to oomycetes2.94E-03
51GO:0031047: gene silencing by RNA3.07E-03
52GO:0010090: trichome morphogenesis3.21E-03
53GO:0006914: autophagy3.34E-03
54GO:0006397: mRNA processing3.76E-03
55GO:0009615: response to virus3.77E-03
56GO:0001666: response to hypoxia3.77E-03
57GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.91E-03
58GO:0015995: chlorophyll biosynthetic process4.21E-03
59GO:0016049: cell growth4.36E-03
60GO:0008219: cell death4.52E-03
61GO:0009817: defense response to fungus, incompatible interaction4.52E-03
62GO:0010311: lateral root formation4.67E-03
63GO:0045087: innate immune response5.31E-03
64GO:0016051: carbohydrate biosynthetic process5.31E-03
65GO:0051707: response to other organism6.32E-03
66GO:0009636: response to toxic substance6.85E-03
67GO:0006857: oligopeptide transport8.16E-03
68GO:0000398: mRNA splicing, via spliceosome1.10E-02
69GO:0009845: seed germination1.23E-02
70GO:0006633: fatty acid biosynthetic process1.37E-02
71GO:0015031: protein transport1.65E-02
72GO:0008380: RNA splicing1.66E-02
73GO:0009617: response to bacterium1.66E-02
74GO:0006970: response to osmotic stress2.10E-02
75GO:0080167: response to karrikin2.32E-02
76GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.38E-02
77GO:0046777: protein autophosphorylation2.44E-02
78GO:0007165: signal transduction2.70E-02
79GO:0006869: lipid transport2.82E-02
80GO:0009751: response to salicylic acid3.04E-02
81GO:0008152: metabolic process3.29E-02
82GO:0009873: ethylene-activated signaling pathway3.68E-02
83GO:0006357: regulation of transcription from RNA polymerase II promoter3.75E-02
84GO:0050832: defense response to fungus3.84E-02
85GO:0009651: response to salt stress4.34E-02
86GO:0009738: abscisic acid-activated signaling pathway4.51E-02
87GO:0009555: pollen development4.62E-02
88GO:0035556: intracellular signal transduction4.80E-02
RankGO TermAdjusted P value
1GO:0008987: quinolinate synthetase A activity0.00E+00
2GO:2001080: chitosan binding0.00E+00
3GO:0030544: Hsp70 protein binding2.53E-05
4GO:0008883: glutamyl-tRNA reductase activity6.44E-05
5GO:0004672: protein kinase activity6.84E-05
6GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.92E-05
7GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.69E-04
8GO:0043015: gamma-tubulin binding2.30E-04
9GO:0019199: transmembrane receptor protein kinase activity2.30E-04
10GO:0005253: anion channel activity2.30E-04
11GO:0002020: protease binding2.95E-04
12GO:0004356: glutamate-ammonia ligase activity2.95E-04
13GO:0035673: oligopeptide transmembrane transporter activity3.65E-04
14GO:0004747: ribokinase activity4.36E-04
15GO:0102425: myricetin 3-O-glucosyltransferase activity5.11E-04
16GO:0102360: daphnetin 3-O-glucosyltransferase activity5.11E-04
17GO:0015140: malate transmembrane transporter activity5.11E-04
18GO:0004714: transmembrane receptor protein tyrosine kinase activity5.89E-04
19GO:0008865: fructokinase activity5.89E-04
20GO:0047893: flavonol 3-O-glucosyltransferase activity5.89E-04
21GO:0008142: oxysterol binding6.69E-04
22GO:0004674: protein serine/threonine kinase activity7.11E-04
23GO:0008047: enzyme activator activity9.24E-04
24GO:0015198: oligopeptide transporter activity1.11E-03
25GO:0004521: endoribonuclease activity1.11E-03
26GO:0019888: protein phosphatase regulator activity1.20E-03
27GO:0008061: chitin binding1.40E-03
28GO:0016301: kinase activity1.62E-03
29GO:0005524: ATP binding1.65E-03
30GO:0035251: UDP-glucosyltransferase activity1.83E-03
31GO:0004540: ribonuclease activity1.83E-03
32GO:0033612: receptor serine/threonine kinase binding1.83E-03
33GO:0042803: protein homodimerization activity3.07E-03
34GO:0004518: nuclease activity3.07E-03
35GO:0050661: NADP binding5.81E-03
36GO:0051539: 4 iron, 4 sulfur cluster binding5.81E-03
37GO:0043621: protein self-association6.67E-03
38GO:0035091: phosphatidylinositol binding6.67E-03
39GO:0031625: ubiquitin protein ligase binding8.35E-03
40GO:0080043: quercetin 3-O-glucosyltransferase activity9.34E-03
41GO:0080044: quercetin 7-O-glucosyltransferase activity9.34E-03
42GO:0003779: actin binding9.74E-03
43GO:0051082: unfolded protein binding9.95E-03
44GO:0016758: transferase activity, transferring hexosyl groups1.14E-02
45GO:0008017: microtubule binding1.51E-02
46GO:0008194: UDP-glycosyltransferase activity1.58E-02
47GO:0046982: protein heterodimerization activity1.97E-02
48GO:0003682: chromatin binding2.07E-02
49GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.64E-02
50GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.85E-02
51GO:0008289: lipid binding3.88E-02
52GO:0000166: nucleotide binding4.62E-02
RankGO TermAdjusted P value
1GO:0016442: RISC complex2.53E-05
2GO:0016363: nuclear matrix4.36E-04
3GO:0010494: cytoplasmic stress granule7.52E-04
4GO:0000159: protein phosphatase type 2A complex1.01E-03
5GO:0071013: catalytic step 2 spliceosome1.01E-03
6GO:0048471: perinuclear region of cytoplasm1.01E-03
7GO:0043234: protein complex1.50E-03
8GO:0030136: clathrin-coated vesicle2.30E-03
9GO:0005618: cell wall2.41E-03
10GO:0000932: P-body3.77E-03
11GO:0009506: plasmodesma3.98E-03
12GO:0005886: plasma membrane6.24E-03
13GO:0005829: cytosol6.46E-03
14GO:0005635: nuclear envelope8.16E-03
15GO:0010008: endosome membrane8.93E-03
16GO:0009524: phragmoplast1.21E-02
17GO:0009705: plant-type vacuole membrane1.46E-02
18GO:0046658: anchored component of plasma membrane1.79E-02
19GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.13E-02
20GO:0005730: nucleolus2.19E-02
21GO:0005794: Golgi apparatus2.35E-02
22GO:0005783: endoplasmic reticulum2.36E-02
23GO:0043231: intracellular membrane-bounded organelle3.29E-02
24GO:0005887: integral component of plasma membrane3.82E-02
25GO:0005774: vacuolar membrane4.47E-02
26GO:0022626: cytosolic ribosome4.47E-02
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Gene type



Gene DE type