Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G45060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
2GO:0097237: cellular response to toxic substance0.00E+00
3GO:0045730: respiratory burst0.00E+00
4GO:0009611: response to wounding6.32E-10
5GO:0033356: UDP-L-arabinose metabolic process1.32E-06
6GO:0071669: plant-type cell wall organization or biogenesis7.17E-06
7GO:0009699: phenylpropanoid biosynthetic process1.24E-05
8GO:0006032: chitin catabolic process2.38E-05
9GO:0000272: polysaccharide catabolic process2.85E-05
10GO:0009820: alkaloid metabolic process3.25E-05
11GO:0019567: arabinose biosynthetic process3.25E-05
12GO:0046244: salicylic acid catabolic process3.25E-05
13GO:0015706: nitrate transport3.36E-05
14GO:0006527: arginine catabolic process8.18E-05
15GO:0015865: purine nucleotide transport8.18E-05
16GO:0009446: putrescine biosynthetic process8.18E-05
17GO:0016998: cell wall macromolecule catabolic process8.34E-05
18GO:0006556: S-adenosylmethionine biosynthetic process1.42E-04
19GO:0016036: cellular response to phosphate starvation1.42E-04
20GO:0046902: regulation of mitochondrial membrane permeability2.11E-04
21GO:0009800: cinnamic acid biosynthetic process2.11E-04
22GO:0045017: glycerolipid biosynthetic process2.11E-04
23GO:0045227: capsule polysaccharide biosynthetic process2.85E-04
24GO:0033358: UDP-L-arabinose biosynthetic process2.85E-04
25GO:0008295: spermidine biosynthetic process2.85E-04
26GO:0042128: nitrate assimilation2.99E-04
27GO:0006952: defense response3.45E-04
28GO:0030244: cellulose biosynthetic process3.49E-04
29GO:0008219: cell death3.49E-04
30GO:0009813: flavonoid biosynthetic process3.67E-04
31GO:0009832: plant-type cell wall biogenesis3.67E-04
32GO:0080167: response to karrikin3.76E-04
33GO:0006559: L-phenylalanine catabolic process4.48E-04
34GO:0006596: polyamine biosynthetic process4.48E-04
35GO:0098869: cellular oxidant detoxification6.27E-04
36GO:0009753: response to jasmonic acid6.71E-04
37GO:0009819: drought recovery7.22E-04
38GO:0009809: lignin biosynthetic process7.51E-04
39GO:0010262: somatic embryogenesis8.20E-04
40GO:0009808: lignin metabolic process8.20E-04
41GO:0010112: regulation of systemic acquired resistance9.20E-04
42GO:0009626: plant-type hypersensitive response9.34E-04
43GO:0055114: oxidation-reduction process1.00E-03
44GO:1903507: negative regulation of nucleic acid-templated transcription1.24E-03
45GO:0009555: pollen development1.25E-03
46GO:0046274: lignin catabolic process1.47E-03
47GO:0009718: anthocyanin-containing compound biosynthetic process1.47E-03
48GO:0002237: response to molecule of bacterial origin1.60E-03
49GO:0055085: transmembrane transport1.68E-03
50GO:0009225: nucleotide-sugar metabolic process1.72E-03
51GO:0010167: response to nitrate1.72E-03
52GO:0048511: rhythmic process2.26E-03
53GO:0006730: one-carbon metabolic process2.40E-03
54GO:2000022: regulation of jasmonic acid mediated signaling pathway2.40E-03
55GO:0006012: galactose metabolic process2.55E-03
56GO:0050832: defense response to fungus2.55E-03
57GO:0006979: response to oxidative stress3.05E-03
58GO:0009651: response to salt stress3.06E-03
59GO:0006814: sodium ion transport3.31E-03
60GO:0001666: response to hypoxia4.67E-03
61GO:0009607: response to biotic stimulus4.85E-03
62GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.85E-03
63GO:0009817: defense response to fungus, incompatible interaction5.60E-03
64GO:0007568: aging6.19E-03
65GO:0009873: ethylene-activated signaling pathway6.37E-03
66GO:0006812: cation transport9.22E-03
67GO:0009664: plant-type cell wall organization9.22E-03
68GO:0006813: potassium ion transport9.69E-03
69GO:0010224: response to UV-B9.93E-03
70GO:0048316: seed development1.11E-02
71GO:0009058: biosynthetic process1.51E-02
72GO:0042744: hydrogen peroxide catabolic process1.60E-02
73GO:0009414: response to water deprivation1.74E-02
74GO:0071555: cell wall organization1.78E-02
75GO:0010150: leaf senescence1.83E-02
76GO:0009617: response to bacterium2.07E-02
77GO:0006970: response to osmotic stress2.63E-02
78GO:0009860: pollen tube growth2.63E-02
79GO:0046686: response to cadmium ion2.77E-02
80GO:0009723: response to ethylene2.77E-02
81GO:0010200: response to chitin2.98E-02
82GO:0045892: negative regulation of transcription, DNA-templated3.34E-02
83GO:0007275: multicellular organism development3.50E-02
84GO:0006869: lipid transport3.53E-02
85GO:0009737: response to abscisic acid3.79E-02
86GO:0009751: response to salicylic acid3.80E-02
87GO:0006629: lipid metabolic process3.84E-02
88GO:0008152: metabolic process4.12E-02
89GO:0006357: regulation of transcription from RNA polymerase II promoter4.69E-02
RankGO TermAdjusted P value
1GO:0052691: UDP-arabinopyranose mutase activity7.18E-08
2GO:0016866: intramolecular transferase activity1.32E-06
3GO:0015112: nitrate transmembrane transporter activity1.95E-05
4GO:0004568: chitinase activity2.38E-05
5GO:0008792: arginine decarboxylase activity3.25E-05
6GO:0008061: chitin binding5.21E-05
7GO:0045548: phenylalanine ammonia-lyase activity1.42E-04
8GO:0033897: ribonuclease T2 activity1.42E-04
9GO:0004478: methionine adenosyltransferase activity1.42E-04
10GO:0005432: calcium:sodium antiporter activity2.11E-04
11GO:0051213: dioxygenase activity2.67E-04
12GO:0050373: UDP-arabinose 4-epimerase activity2.85E-04
13GO:0005471: ATP:ADP antiporter activity3.65E-04
14GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.03E-04
15GO:0003978: UDP-glucose 4-epimerase activity5.36E-04
16GO:0004144: diacylglycerol O-acyltransferase activity5.36E-04
17GO:0052747: sinapyl alcohol dehydrogenase activity7.22E-04
18GO:0015491: cation:cation antiporter activity7.22E-04
19GO:0016207: 4-coumarate-CoA ligase activity9.20E-04
20GO:0016844: strictosidine synthase activity1.02E-03
21GO:0004521: endoribonuclease activity1.36E-03
22GO:0045551: cinnamyl-alcohol dehydrogenase activity1.36E-03
23GO:0004022: alcohol dehydrogenase (NAD) activity1.47E-03
24GO:0004867: serine-type endopeptidase inhibitor activity1.72E-03
25GO:0005507: copper ion binding1.94E-03
26GO:0001046: core promoter sequence-specific DNA binding1.99E-03
27GO:0003714: transcription corepressor activity1.99E-03
28GO:0005516: calmodulin binding2.08E-03
29GO:0004540: ribonuclease activity2.26E-03
30GO:0016760: cellulose synthase (UDP-forming) activity2.55E-03
31GO:0050660: flavin adenine dinucleotide binding3.14E-03
32GO:0016722: oxidoreductase activity, oxidizing metal ions4.32E-03
33GO:0009055: electron carrier activity5.30E-03
34GO:0005515: protein binding8.37E-03
35GO:0016874: ligase activity1.19E-02
36GO:0015297: antiporter activity1.77E-02
37GO:0043565: sequence-specific DNA binding2.39E-02
38GO:0004601: peroxidase activity2.50E-02
39GO:0016788: hydrolase activity, acting on ester bonds2.53E-02
40GO:0008233: peptidase activity2.87E-02
41GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.31E-02
42GO:0042803: protein homodimerization activity3.42E-02
43GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.57E-02
44GO:0008289: lipid binding4.85E-02
RankGO TermAdjusted P value
1GO:0005618: cell wall2.05E-06
2GO:0000138: Golgi trans cisterna3.25E-05
3GO:0009505: plant-type cell wall6.97E-04
4GO:0005740: mitochondrial envelope1.13E-03
5GO:0005795: Golgi stack1.72E-03
6GO:0032580: Golgi cisterna membrane4.14E-03
7GO:0005576: extracellular region6.90E-03
8GO:0090406: pollen tube7.87E-03
9GO:0022626: cytosolic ribosome8.37E-03
10GO:0016021: integral component of membrane8.53E-03
11GO:0005774: vacuolar membrane1.46E-02
12GO:0048046: apoplast1.55E-02
13GO:0005743: mitochondrial inner membrane3.65E-02
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Gene type



Gene DE type