GO Enrichment Analysis of Co-expressed Genes with
AT3G45030
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 3 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 4 | GO:0006412: translation | 3.86E-131 |
| 5 | GO:0042254: ribosome biogenesis | 6.58E-51 |
| 6 | GO:0000027: ribosomal large subunit assembly | 3.45E-12 |
| 7 | GO:0000028: ribosomal small subunit assembly | 3.45E-08 |
| 8 | GO:0016444: somatic cell DNA recombination | 1.21E-04 |
| 9 | GO:0006364: rRNA processing | 1.95E-04 |
| 10 | GO:0006407: rRNA export from nucleus | 2.29E-04 |
| 11 | GO:0031120: snRNA pseudouridine synthesis | 2.29E-04 |
| 12 | GO:0031118: rRNA pseudouridine synthesis | 2.29E-04 |
| 13 | GO:0030490: maturation of SSU-rRNA | 2.29E-04 |
| 14 | GO:0000494: box C/D snoRNA 3'-end processing | 2.29E-04 |
| 15 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.29E-04 |
| 16 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.29E-04 |
| 17 | GO:1990258: histone glutamine methylation | 2.29E-04 |
| 18 | GO:0010162: seed dormancy process | 4.23E-04 |
| 19 | GO:0009735: response to cytokinin | 4.94E-04 |
| 20 | GO:0045905: positive regulation of translational termination | 5.10E-04 |
| 21 | GO:0045901: positive regulation of translational elongation | 5.10E-04 |
| 22 | GO:0048569: post-embryonic animal organ development | 5.10E-04 |
| 23 | GO:0006452: translational frameshifting | 5.10E-04 |
| 24 | GO:0009967: positive regulation of signal transduction | 5.10E-04 |
| 25 | GO:0006626: protein targeting to mitochondrion | 6.36E-04 |
| 26 | GO:1902626: assembly of large subunit precursor of preribosome | 8.29E-04 |
| 27 | GO:0009150: purine ribonucleotide metabolic process | 8.29E-04 |
| 28 | GO:0002181: cytoplasmic translation | 8.29E-04 |
| 29 | GO:0010476: gibberellin mediated signaling pathway | 8.29E-04 |
| 30 | GO:0042256: mature ribosome assembly | 8.29E-04 |
| 31 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.81E-04 |
| 32 | GO:0008283: cell proliferation | 9.94E-04 |
| 33 | GO:0007004: telomere maintenance via telomerase | 1.18E-03 |
| 34 | GO:0070301: cellular response to hydrogen peroxide | 1.18E-03 |
| 35 | GO:0006334: nucleosome assembly | 1.18E-03 |
| 36 | GO:0006241: CTP biosynthetic process | 1.18E-03 |
| 37 | GO:0006165: nucleoside diphosphate phosphorylation | 1.18E-03 |
| 38 | GO:0006228: UTP biosynthetic process | 1.18E-03 |
| 39 | GO:0006164: purine nucleotide biosynthetic process | 1.18E-03 |
| 40 | GO:0009294: DNA mediated transformation | 1.40E-03 |
| 41 | GO:0042274: ribosomal small subunit biogenesis | 1.57E-03 |
| 42 | GO:0006183: GTP biosynthetic process | 1.57E-03 |
| 43 | GO:0010197: polar nucleus fusion | 1.92E-03 |
| 44 | GO:0031167: rRNA methylation | 2.01E-03 |
| 45 | GO:0000470: maturation of LSU-rRNA | 2.48E-03 |
| 46 | GO:0000741: karyogamy | 2.48E-03 |
| 47 | GO:0000398: mRNA splicing, via spliceosome | 2.70E-03 |
| 48 | GO:0009955: adaxial/abaxial pattern specification | 2.97E-03 |
| 49 | GO:0001522: pseudouridine synthesis | 4.06E-03 |
| 50 | GO:0006413: translational initiation | 4.12E-03 |
| 51 | GO:0001558: regulation of cell growth | 4.65E-03 |
| 52 | GO:0001510: RNA methylation | 4.65E-03 |
| 53 | GO:0006189: 'de novo' IMP biosynthetic process | 5.27E-03 |
| 54 | GO:0007338: single fertilization | 5.27E-03 |
| 55 | GO:0000724: double-strand break repair via homologous recombination | 5.37E-03 |
| 56 | GO:0000387: spliceosomal snRNP assembly | 5.91E-03 |
| 57 | GO:0006259: DNA metabolic process | 6.58E-03 |
| 58 | GO:0009644: response to high light intensity | 7.84E-03 |
| 59 | GO:0006790: sulfur compound metabolic process | 8.00E-03 |
| 60 | GO:0012501: programmed cell death | 8.00E-03 |
| 61 | GO:0010102: lateral root morphogenesis | 8.75E-03 |
| 62 | GO:0006446: regulation of translational initiation | 9.52E-03 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 1.23E-02 |
| 64 | GO:0051302: regulation of cell division | 1.28E-02 |
| 65 | GO:0007005: mitochondrion organization | 1.46E-02 |
| 66 | GO:0040007: growth | 1.56E-02 |
| 67 | GO:0071215: cellular response to abscisic acid stimulus | 1.56E-02 |
| 68 | GO:0008033: tRNA processing | 1.85E-02 |
| 69 | GO:0009749: response to glucose | 2.16E-02 |
| 70 | GO:0006635: fatty acid beta-oxidation | 2.27E-02 |
| 71 | GO:0009567: double fertilization forming a zygote and endosperm | 2.60E-02 |
| 72 | GO:0010311: lateral root formation | 3.68E-02 |
| 73 | GO:0015031: protein transport | 3.82E-02 |
| 74 | GO:0010043: response to zinc ion | 3.94E-02 |
| 75 | GO:0009409: response to cold | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 3.15E-150 |
| 4 | GO:0003729: mRNA binding | 1.81E-25 |
| 5 | GO:0019843: rRNA binding | 1.23E-14 |
| 6 | GO:0003723: RNA binding | 8.76E-07 |
| 7 | GO:0030515: snoRNA binding | 1.59E-04 |
| 8 | GO:0043022: ribosome binding | 2.03E-04 |
| 9 | GO:0005080: protein kinase C binding | 2.29E-04 |
| 10 | GO:1990259: histone-glutamine methyltransferase activity | 2.29E-04 |
| 11 | GO:0035614: snRNA stem-loop binding | 2.29E-04 |
| 12 | GO:0001055: RNA polymerase II activity | 3.62E-04 |
| 13 | GO:0001054: RNA polymerase I activity | 4.90E-04 |
| 14 | GO:0030619: U1 snRNA binding | 5.10E-04 |
| 15 | GO:0070034: telomerase RNA binding | 5.10E-04 |
| 16 | GO:0005078: MAP-kinase scaffold activity | 5.10E-04 |
| 17 | GO:0001056: RNA polymerase III activity | 5.61E-04 |
| 18 | GO:0003746: translation elongation factor activity | 7.25E-04 |
| 19 | GO:0008649: rRNA methyltransferase activity | 8.29E-04 |
| 20 | GO:0032947: protein complex scaffold | 8.29E-04 |
| 21 | GO:0004407: histone deacetylase activity | 9.81E-04 |
| 22 | GO:0004550: nucleoside diphosphate kinase activity | 1.18E-03 |
| 23 | GO:0047627: adenylylsulfatase activity | 1.18E-03 |
| 24 | GO:0008097: 5S rRNA binding | 1.18E-03 |
| 25 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 2.48E-03 |
| 26 | GO:0008235: metalloexopeptidase activity | 3.50E-03 |
| 27 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.44E-03 |
| 28 | GO:0003678: DNA helicase activity | 5.27E-03 |
| 29 | GO:0042393: histone binding | 6.41E-03 |
| 30 | GO:0044183: protein binding involved in protein folding | 7.28E-03 |
| 31 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.78E-03 |
| 32 | GO:0003743: translation initiation factor activity | 2.83E-02 |
| 33 | GO:0004004: ATP-dependent RNA helicase activity | 3.31E-02 |
| 34 | GO:0000166: nucleotide binding | 3.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0005840: ribosome | 1.17E-99 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 2.29E-89 |
| 6 | GO:0022626: cytosolic ribosome | 1.68E-88 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 4.14E-65 |
| 8 | GO:0005737: cytoplasm | 2.69E-34 |
| 9 | GO:0005730: nucleolus | 9.11E-29 |
| 10 | GO:0005829: cytosol | 1.65E-28 |
| 11 | GO:0009506: plasmodesma | 3.41E-22 |
| 12 | GO:0015934: large ribosomal subunit | 3.43E-16 |
| 13 | GO:0015935: small ribosomal subunit | 6.92E-10 |
| 14 | GO:0005618: cell wall | 1.01E-09 |
| 15 | GO:0005774: vacuolar membrane | 2.95E-09 |
| 16 | GO:0005773: vacuole | 6.28E-08 |
| 17 | GO:0016020: membrane | 5.17E-06 |
| 18 | GO:0015030: Cajal body | 1.12E-05 |
| 19 | GO:0005886: plasma membrane | 1.79E-04 |
| 20 | GO:0030686: 90S preribosome | 2.29E-04 |
| 21 | GO:0005736: DNA-directed RNA polymerase I complex | 3.04E-04 |
| 22 | GO:0005685: U1 snRNP | 3.04E-04 |
| 23 | GO:0005666: DNA-directed RNA polymerase III complex | 3.62E-04 |
| 24 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.23E-04 |
| 25 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.61E-04 |
| 26 | GO:0034719: SMN-Sm protein complex | 8.29E-04 |
| 27 | GO:0005853: eukaryotic translation elongation factor 1 complex | 8.29E-04 |
| 28 | GO:0005758: mitochondrial intermembrane space | 9.81E-04 |
| 29 | GO:0031429: box H/ACA snoRNP complex | 1.18E-03 |
| 30 | GO:0005682: U5 snRNP | 1.57E-03 |
| 31 | GO:0005681: spliceosomal complex | 1.78E-03 |
| 32 | GO:0005687: U4 snRNP | 2.01E-03 |
| 33 | GO:0097526: spliceosomal tri-snRNP complex | 2.01E-03 |
| 34 | GO:0031428: box C/D snoRNP complex | 2.48E-03 |
| 35 | GO:0005689: U12-type spliceosomal complex | 2.97E-03 |
| 36 | GO:0016272: prefoldin complex | 2.97E-03 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 3.41E-03 |
| 38 | GO:0071004: U2-type prespliceosome | 4.06E-03 |
| 39 | GO:0005763: mitochondrial small ribosomal subunit | 5.27E-03 |
| 40 | GO:0009507: chloroplast | 5.87E-03 |
| 41 | GO:0071011: precatalytic spliceosome | 5.91E-03 |
| 42 | GO:0005686: U2 snRNP | 6.58E-03 |
| 43 | GO:0071013: catalytic step 2 spliceosome | 7.28E-03 |
| 44 | GO:0048471: perinuclear region of cytoplasm | 7.28E-03 |
| 45 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.28E-03 |
| 46 | GO:0032040: small-subunit processome | 8.00E-03 |
| 47 | GO:0019013: viral nucleocapsid | 8.75E-03 |
| 48 | GO:0000419: DNA-directed RNA polymerase V complex | 1.11E-02 |
| 49 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.52E-02 |
| 50 | GO:0005622: intracellular | 2.22E-02 |