co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G44110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009408: response to heat	1.31E-10
2	GO:0006457: protein folding	1.04E-07
3	GO:0051131: chaperone-mediated protein complex assembly	2.44E-07
4	GO:0009073: aromatic amino acid family biosynthetic process	1.12E-05
5	GO:0051014: actin filament severing	1.77E-05
6	GO:0071277: cellular response to calcium ion	1.77E-05
7	GO:0099636: cytoplasmic streaming	1.77E-05
8	GO:0080173: male-female gamete recognition during double fertilization	1.77E-05
9	GO:0046686: response to cadmium ion	2.79E-05
10	GO:0061077: chaperone-mediated protein folding	3.48E-05
11	GO:0051262: protein tetramerization	4.61E-05
12	GO:1902066: regulation of cell wall pectin metabolic process	4.61E-05
13	GO:0019521: D-gluconate metabolic process	4.61E-05
14	GO:0010372: positive regulation of gibberellin biosynthetic process	4.61E-05
15	GO:0048586: regulation of long-day photoperiodism, flowering	8.18E-05
16	GO:0032922: circadian regulation of gene expression	8.18E-05
17	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	8.18E-05
18	GO:1901672: positive regulation of systemic acquired resistance	8.18E-05
19	GO:0009615: response to virus	1.20E-04
20	GO:0010104: regulation of ethylene-activated signaling pathway	1.23E-04
21	GO:0051764: actin crosslink formation	1.69E-04
22	GO:0033365: protein localization to organelle	2.72E-04
23	GO:0009423: chorismate biosynthetic process	3.27E-04
24	GO:0015977: carbon fixation	3.27E-04
25	GO:0070370: cellular heat acclimation	3.84E-04
26	GO:0051693: actin filament capping	3.84E-04
27	GO:0006402: mRNA catabolic process	4.43E-04
28	GO:0050821: protein stabilization	4.43E-04
29	GO:0007338: single fertilization	5.68E-04
30	GO:0006098: pentose-phosphate shunt	5.68E-04
31	GO:0008202: steroid metabolic process	6.32E-04
32	GO:0090332: stomatal closure	6.32E-04
33	GO:0030042: actin filament depolymerization	6.32E-04
34	GO:0009845: seed germination	6.82E-04
35	GO:0006413: translational initiation	8.05E-04
36	GO:0000266: mitochondrial fission	8.38E-04
37	GO:0007015: actin filament organization	9.82E-04
38	GO:0006446: regulation of translational initiation	9.82E-04
39	GO:0009266: response to temperature stimulus	9.82E-04
40	GO:0034605: cellular response to heat	9.82E-04
41	GO:0009617: response to bacterium	1.02E-03
42	GO:0010187: negative regulation of seed germination	1.21E-03
43	GO:0051017: actin filament bundle assembly	1.21E-03
44	GO:0007010: cytoskeleton organization	1.21E-03
45	GO:0006970: response to osmotic stress	1.40E-03
46	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.46E-03
47	GO:0048366: leaf development	1.52E-03
48	GO:0009306: protein secretion	1.63E-03
49	GO:0031047: gene silencing by RNA	2.29E-03
50	GO:0009567: double fertilization forming a zygote and endosperm	2.49E-03
51	GO:0010286: heat acclimation	2.60E-03
52	GO:0009816: defense response to bacterium, incompatible interaction	2.91E-03
53	GO:0048767: root hair elongation	3.47E-03
54	GO:0009631: cold acclimation	3.70E-03
55	GO:0045087: innate immune response	3.94E-03
56	GO:0006099: tricarboxylic acid cycle	4.06E-03
57	GO:0042542: response to hydrogen peroxide	4.56E-03
58	GO:0009644: response to high light intensity	4.94E-03
59	GO:0009651: response to salt stress	5.29E-03
60	GO:0006364: rRNA processing	5.75E-03
61	GO:0006417: regulation of translation	6.17E-03
62	GO:0016036: cellular response to phosphate starvation	1.02E-02
63	GO:0007623: circadian rhythm	1.08E-02
64	GO:0009737: response to abscisic acid	1.78E-02
65	GO:0015979: photosynthesis	1.87E-02
66	GO:0006869: lipid transport	2.07E-02
67	GO:0006397: mRNA processing	2.32E-02
68	GO:0048364: root development	2.32E-02
69	GO:0009908: flower development	3.15E-02
70	GO:0009735: response to cytokinin	3.18E-02
71	GO:0009611: response to wounding	3.44E-02

Rank	GO Term	Adjusted P value
1	GO:0004107: chorismate synthase activity	0.00E+00
2	GO:0003729: mRNA binding	1.39E-06
3	GO:0032266: phosphatidylinositol-3-phosphate binding	1.77E-05
4	GO:0080025: phosphatidylinositol-3,5-bisphosphate binding	1.77E-05
5	GO:0051082: unfolded protein binding	2.14E-05
6	GO:0032934: sterol binding	4.61E-05
7	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	4.61E-05
8	GO:0008964: phosphoenolpyruvate carboxylase activity	8.18E-05
9	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.27E-04
10	GO:0004012: phospholipid-translocating ATPase activity	3.27E-04
11	GO:0005524: ATP binding	4.61E-04
12	GO:0008142: oxysterol binding	5.05E-04
13	GO:0001054: RNA polymerase I activity	7.68E-04
14	GO:0031072: heat shock protein binding	9.08E-04
15	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.08E-04
16	GO:0005515: protein binding	9.87E-04
17	GO:0003743: translation initiation factor activity	9.96E-04
18	GO:0005528: FK506 binding	1.21E-03
19	GO:0001085: RNA polymerase II transcription factor binding	1.90E-03
20	GO:0010181: FMN binding	2.00E-03
21	GO:0004518: nuclease activity	2.29E-03
22	GO:0051015: actin filament binding	2.39E-03
23	GO:0003723: RNA binding	3.39E-03
24	GO:0016887: ATPase activity	3.60E-03
25	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.70E-03
26	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.21E-03
27	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.75E-03
28	GO:0031625: ubiquitin protein ligase binding	6.17E-03
29	GO:0003779: actin binding	7.19E-03
30	GO:0008026: ATP-dependent helicase activity	7.64E-03
31	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	9.39E-03
32	GO:0000287: magnesium ion binding	1.44E-02
33	GO:0003682: chromatin binding	1.52E-02
34	GO:0000166: nucleotide binding	3.39E-02
35	GO:0003676: nucleic acid binding	3.43E-02
36	GO:0005516: calmodulin binding	4.53E-02
37	GO:0005525: GTP binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005829: cytosol	3.07E-10
3	GO:0016442: RISC complex	1.77E-05
4	GO:0030688: preribosome, small subunit precursor	1.77E-05
5	GO:0005730: nucleolus	3.34E-04
6	GO:0010494: cytoplasmic stress granule	5.68E-04
7	GO:0005736: DNA-directed RNA polymerase I complex	5.68E-04
8	GO:0005794: Golgi apparatus	7.35E-04
9	GO:0005884: actin filament	7.68E-04
10	GO:0048471: perinuclear region of cytoplasm	7.68E-04
11	GO:0005618: cell wall	1.21E-03
12	GO:0005741: mitochondrial outer membrane	1.37E-03
13	GO:0071944: cell periphery	2.39E-03
14	GO:0000932: P-body	2.80E-03
15	GO:0005667: transcription factor complex	3.02E-03
16	GO:0005737: cytoplasm	3.06E-03
17	GO:0005886: plasma membrane	3.96E-03
18	GO:0031902: late endosome membrane	4.43E-03
19	GO:0005777: peroxisome	4.71E-03
20	GO:0005856: cytoskeleton	5.07E-03
21	GO:0005635: nuclear envelope	6.03E-03
22	GO:0005623: cell	8.74E-03
23	GO:0009536: plastid	1.02E-02
24	GO:0009506: plasmodesma	3.01E-02
25	GO:0048046: apoplast	3.04E-02
26	GO:0005634: nucleus	3.97E-02
27	GO:0005802: trans-Golgi network	4.74E-02