co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G43960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042335: cuticle development	1.18E-08
2	GO:0006631: fatty acid metabolic process	1.60E-05
3	GO:0000038: very long-chain fatty acid metabolic process	2.22E-05
4	GO:0080051: cutin transport	2.76E-05
5	GO:0009809: lignin biosynthetic process	2.97E-05
6	GO:0010025: wax biosynthetic process	4.67E-05
7	GO:0042545: cell wall modification	4.92E-05
8	GO:0015908: fatty acid transport	7.01E-05
9	GO:0045490: pectin catabolic process	1.16E-04
10	GO:0009062: fatty acid catabolic process	1.23E-04
11	GO:1901332: negative regulation of lateral root development	1.83E-04
12	GO:0022622: root system development	2.48E-04
13	GO:0071585: detoxification of cadmium ion	2.48E-04
14	GO:0010222: stem vascular tissue pattern formation	2.48E-04
15	GO:0046345: abscisic acid catabolic process	2.48E-04
16	GO:0050829: defense response to Gram-negative bacterium	5.49E-04
17	GO:0032880: regulation of protein localization	5.49E-04
18	GO:0030497: fatty acid elongation	5.49E-04
19	GO:0042761: very long-chain fatty acid biosynthetic process	8.99E-04
20	GO:0009737: response to abscisic acid	1.12E-03
21	GO:0016024: CDP-diacylglycerol biosynthetic process	1.19E-03
22	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.19E-03
23	GO:0010588: cotyledon vascular tissue pattern formation	1.29E-03
24	GO:2000012: regulation of auxin polar transport	1.29E-03
25	GO:0018107: peptidyl-threonine phosphorylation	1.29E-03
26	GO:0006633: fatty acid biosynthetic process	1.32E-03
27	GO:0010143: cutin biosynthetic process	1.40E-03
28	GO:0010540: basipetal auxin transport	1.40E-03
29	GO:0055114: oxidation-reduction process	2.02E-03
30	GO:0001944: vasculature development	2.22E-03
31	GO:0009414: response to water deprivation	2.26E-03
32	GO:0008284: positive regulation of cell proliferation	2.48E-03
33	GO:0042631: cellular response to water deprivation	2.61E-03
34	GO:0009958: positive gravitropism	2.74E-03
35	GO:0048868: pollen tube development	2.74E-03
36	GO:0010268: brassinosteroid homeostasis	2.74E-03
37	GO:0000302: response to reactive oxygen species	3.16E-03
38	GO:0006635: fatty acid beta-oxidation	3.16E-03
39	GO:0016132: brassinosteroid biosynthetic process	3.16E-03
40	GO:0009409: response to cold	3.41E-03
41	GO:0006869: lipid transport	3.59E-03
42	GO:0010252: auxin homeostasis	3.60E-03
43	GO:0009639: response to red or far red light	3.60E-03
44	GO:0016125: sterol metabolic process	3.60E-03
45	GO:0009911: positive regulation of flower development	4.06E-03
46	GO:0048767: root hair elongation	5.04E-03
47	GO:0009631: cold acclimation	5.38E-03
48	GO:0048527: lateral root development	5.38E-03
49	GO:0009637: response to blue light	5.73E-03
50	GO:0009926: auxin polar transport	6.82E-03
51	GO:0009416: response to light stimulus	7.12E-03
52	GO:0009644: response to high light intensity	7.20E-03
53	GO:0042538: hyperosmotic salinity response	7.99E-03
54	GO:0006857: oligopeptide transport	8.81E-03
55	GO:0055085: transmembrane transport	9.04E-03
56	GO:0018105: peptidyl-serine phosphorylation	1.10E-02
57	GO:0071555: cell wall organization	1.45E-02
58	GO:0030154: cell differentiation	1.58E-02
59	GO:0010468: regulation of gene expression	1.79E-02
60	GO:0080167: response to karrikin	2.51E-02
61	GO:0010200: response to chitin	2.58E-02
62	GO:0016042: lipid catabolic process	3.25E-02
63	GO:0009751: response to salicylic acid	3.29E-02
64	GO:0009873: ethylene-activated signaling pathway	3.98E-02
65	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.05E-02
66	GO:0009734: auxin-activated signaling pathway	4.24E-02
67	GO:0050832: defense response to fungus	4.29E-02
68	GO:0009908: flower development	4.65E-02
69	GO:0009735: response to cytokinin	4.68E-02
70	GO:0009651: response to salt stress	4.84E-02
71	GO:0009555: pollen development	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0070330: aromatase activity	7.98E-11
2	GO:0018685: alkane 1-monooxygenase activity	2.70E-09
3	GO:0052747: sinapyl alcohol dehydrogenase activity	2.47E-08
4	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.71E-07
5	GO:0009922: fatty acid elongase activity	1.72E-06
6	GO:0015245: fatty acid transporter activity	2.76E-05
7	GO:0008809: carnitine racemase activity	2.76E-05
8	GO:0045330: aspartyl esterase activity	3.48E-05
9	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.67E-05
10	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.67E-05
11	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.67E-05
12	GO:0030599: pectinesterase activity	4.70E-05
13	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	1.23E-04
14	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.83E-04
15	GO:0019825: oxygen binding	2.02E-04
16	GO:0005506: iron ion binding	3.48E-04
17	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.92E-04
18	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.92E-04
19	GO:0020037: heme binding	7.18E-04
20	GO:0016746: transferase activity, transferring acyl groups	8.88E-04
21	GO:0009672: auxin:proton symporter activity	8.99E-04
22	GO:0010329: auxin efflux transmembrane transporter activity	1.29E-03
23	GO:0008083: growth factor activity	1.40E-03
24	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.83E-03
25	GO:0016791: phosphatase activity	3.60E-03
26	GO:0008289: lipid binding	5.59E-03
27	GO:0003993: acid phosphatase activity	5.91E-03
28	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	9.65E-03
29	GO:0046910: pectinesterase inhibitor activity	1.51E-02
30	GO:0003824: catalytic activity	1.59E-02
31	GO:0005215: transporter activity	1.60E-02
32	GO:0016788: hydrolase activity, acting on ester bonds	2.19E-02
33	GO:0052689: carboxylic ester hydrolase activity	2.70E-02
34	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.86E-02
35	GO:0042803: protein homodimerization activity	2.95E-02
36	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.09E-02
37	GO:0016787: hydrolase activity	3.10E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	6.22E-05
2	GO:0005618: cell wall	9.99E-05
3	GO:0009897: external side of plasma membrane	1.23E-04
4	GO:0005783: endoplasmic reticulum	3.55E-04
5	GO:0016021: integral component of membrane	1.59E-03
6	GO:0046658: anchored component of plasma membrane	1.91E-03
7	GO:0071944: cell periphery	3.45E-03
8	GO:0005576: extracellular region	9.71E-03
9	GO:0031225: anchored component of membrane	1.11E-02
10	GO:0005622: intracellular	1.27E-02
11	GO:0005615: extracellular space	1.71E-02
12	GO:0016020: membrane	1.94E-02
13	GO:0005789: endoplasmic reticulum membrane	2.21E-02
14	GO:0005886: plasma membrane	4.54E-02
15	GO:0022626: cytosolic ribosome	4.84E-02