co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G43720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009667: plastid inner membrane organization	0.00E+00
2	GO:1904526: regulation of microtubule binding	0.00E+00
3	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
4	GO:1905499: trichome papilla formation	0.00E+00
5	GO:0019593: mannitol biosynthetic process	0.00E+00
6	GO:0010025: wax biosynthetic process	4.59E-11
7	GO:0042335: cuticle development	5.87E-10
8	GO:0009409: response to cold	1.63E-09
9	GO:0006633: fatty acid biosynthetic process	9.70E-08
10	GO:0009631: cold acclimation	8.31E-07
11	GO:0009737: response to abscisic acid	1.85E-06
12	GO:0000038: very long-chain fatty acid metabolic process	8.14E-06
13	GO:0010143: cutin biosynthetic process	1.61E-05
14	GO:0006665: sphingolipid metabolic process	3.28E-05
15	GO:0009414: response to water deprivation	3.32E-05
16	GO:0006631: fatty acid metabolic process	3.86E-05
17	GO:0050829: defense response to Gram-negative bacterium	9.14E-05
18	GO:0008610: lipid biosynthetic process	1.18E-04
19	GO:0009609: response to symbiotic bacterium	1.60E-04
20	GO:0006723: cuticle hydrocarbon biosynthetic process	1.60E-04
21	GO:0042759: long-chain fatty acid biosynthetic process	1.60E-04
22	GO:0080051: cutin transport	1.60E-04
23	GO:0033481: galacturonate biosynthetic process	1.60E-04
24	GO:0009416: response to light stimulus	2.01E-04
25	GO:0050832: defense response to fungus	2.09E-04
26	GO:0042761: very long-chain fatty acid biosynthetic process	2.16E-04
27	GO:0031407: oxylipin metabolic process	3.65E-04
28	GO:0010289: homogalacturonan biosynthetic process	3.65E-04
29	GO:0015908: fatty acid transport	3.65E-04
30	GO:0015709: thiosulfate transport	3.65E-04
31	GO:0071422: succinate transmembrane transport	3.65E-04
32	GO:0010150: leaf senescence	3.72E-04
33	GO:0009873: ethylene-activated signaling pathway	5.59E-04
34	GO:0010325: raffinose family oligosaccharide biosynthetic process	5.97E-04
35	GO:0046168: glycerol-3-phosphate catabolic process	5.97E-04
36	GO:0043447: alkane biosynthetic process	5.97E-04
37	GO:0015840: urea transport	5.97E-04
38	GO:0009062: fatty acid catabolic process	5.97E-04
39	GO:0006081: cellular aldehyde metabolic process	5.97E-04
40	GO:0042538: hyperosmotic salinity response	7.04E-04
41	GO:0009809: lignin biosynthetic process	7.69E-04
42	GO:0006970: response to osmotic stress	8.13E-04
43	GO:0015729: oxaloacetate transport	8.53E-04
44	GO:0006072: glycerol-3-phosphate metabolic process	8.53E-04
45	GO:0009413: response to flooding	8.53E-04
46	GO:0051259: protein oligomerization	8.53E-04
47	GO:0009611: response to wounding	1.01E-03
48	GO:0042631: cellular response to water deprivation	1.09E-03
49	GO:0046345: abscisic acid catabolic process	1.13E-03
50	GO:0022622: root system development	1.13E-03
51	GO:0006552: leucine catabolic process	1.13E-03
52	GO:0071585: detoxification of cadmium ion	1.13E-03
53	GO:0010222: stem vascular tissue pattern formation	1.13E-03
54	GO:0042545: cell wall modification	1.15E-03
55	GO:0048359: mucilage metabolic process involved in seed coat development	1.43E-03
56	GO:0071423: malate transmembrane transport	1.43E-03
57	GO:0048232: male gamete generation	1.76E-03
58	GO:0070814: hydrogen sulfide biosynthetic process	1.76E-03
59	GO:0035435: phosphate ion transmembrane transport	1.76E-03
60	GO:0009913: epidermal cell differentiation	1.76E-03
61	GO:1900425: negative regulation of defense response to bacterium	1.76E-03
62	GO:0006574: valine catabolic process	1.76E-03
63	GO:0045926: negative regulation of growth	2.11E-03
64	GO:0009082: branched-chain amino acid biosynthetic process	2.11E-03
65	GO:0010555: response to mannitol	2.11E-03
66	GO:0045490: pectin catabolic process	2.37E-03
67	GO:0030497: fatty acid elongation	2.48E-03
68	GO:0008272: sulfate transport	2.48E-03
69	GO:1902074: response to salt	2.48E-03
70	GO:0032880: regulation of protein localization	2.48E-03
71	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	2.48E-03
72	GO:0009610: response to symbiotic fungus	2.48E-03
73	GO:0007155: cell adhesion	2.88E-03
74	GO:0009819: drought recovery	2.88E-03
75	GO:0009415: response to water	2.88E-03
76	GO:2000070: regulation of response to water deprivation	2.88E-03
77	GO:0050821: protein stabilization	2.88E-03
78	GO:0009651: response to salt stress	3.08E-03
79	GO:0009827: plant-type cell wall modification	3.29E-03
80	GO:0010345: suberin biosynthetic process	3.72E-03
81	GO:0015780: nucleotide-sugar transport	3.72E-03
82	GO:2000280: regulation of root development	4.17E-03
83	GO:0000103: sulfate assimilation	4.64E-03
84	GO:0080167: response to karrikin	5.41E-03
85	GO:0016024: CDP-diacylglycerol biosynthetic process	5.62E-03
86	GO:0045037: protein import into chloroplast stroma	5.62E-03
87	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.62E-03
88	GO:0010200: response to chitin	5.64E-03
89	GO:0005986: sucrose biosynthetic process	6.14E-03
90	GO:0010588: cotyledon vascular tissue pattern formation	6.14E-03
91	GO:2000012: regulation of auxin polar transport	6.14E-03
92	GO:0050826: response to freezing	6.14E-03
93	GO:0018107: peptidyl-threonine phosphorylation	6.14E-03
94	GO:0005975: carbohydrate metabolic process	6.96E-03
95	GO:0009225: nucleotide-sugar metabolic process	7.22E-03
96	GO:0070588: calcium ion transmembrane transport	7.22E-03
97	GO:0006833: water transport	7.79E-03
98	GO:0019344: cysteine biosynthetic process	8.38E-03
99	GO:0030150: protein import into mitochondrial matrix	8.38E-03
100	GO:0055114: oxidation-reduction process	8.54E-03
101	GO:0016042: lipid catabolic process	8.55E-03
102	GO:0007017: microtubule-based process	8.97E-03
103	GO:0009695: jasmonic acid biosynthetic process	8.97E-03
104	GO:0009269: response to desiccation	9.59E-03
105	GO:0031408: oxylipin biosynthetic process	9.59E-03
106	GO:0016998: cell wall macromolecule catabolic process	9.59E-03
107	GO:0051260: protein homooligomerization	9.59E-03
108	GO:0010017: red or far-red light signaling pathway	1.02E-02
109	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.09E-02
110	GO:0010091: trichome branching	1.15E-02
111	GO:0070417: cellular response to cold	1.22E-02
112	GO:0008284: positive regulation of cell proliferation	1.22E-02
113	GO:0071555: cell wall organization	1.26E-02
114	GO:0010268: brassinosteroid homeostasis	1.36E-02
115	GO:0045489: pectin biosynthetic process	1.36E-02
116	GO:0009958: positive gravitropism	1.36E-02
117	GO:0048868: pollen tube development	1.36E-02
118	GO:0007623: circadian rhythm	1.45E-02
119	GO:0009749: response to glucose	1.50E-02
120	GO:0008654: phospholipid biosynthetic process	1.50E-02
121	GO:0000302: response to reactive oxygen species	1.58E-02
122	GO:0006635: fatty acid beta-oxidation	1.58E-02
123	GO:0016132: brassinosteroid biosynthetic process	1.58E-02
124	GO:0048235: pollen sperm cell differentiation	1.65E-02
125	GO:0010090: trichome morphogenesis	1.73E-02
126	GO:0016125: sterol metabolic process	1.81E-02
127	GO:0009639: response to red or far red light	1.81E-02
128	GO:0009828: plant-type cell wall loosening	1.81E-02
129	GO:0010286: heat acclimation	1.89E-02
130	GO:0010411: xyloglucan metabolic process	2.30E-02
131	GO:0030244: cellulose biosynthetic process	2.47E-02
132	GO:0048767: root hair elongation	2.56E-02
133	GO:0010311: lateral root formation	2.56E-02
134	GO:0009834: plant-type secondary cell wall biogenesis	2.65E-02
135	GO:0006811: ion transport	2.65E-02
136	GO:0048527: lateral root development	2.74E-02
137	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.89E-02
138	GO:0045087: innate immune response	2.93E-02
139	GO:0006839: mitochondrial transport	3.21E-02
140	GO:0008283: cell proliferation	3.51E-02
141	GO:0009744: response to sucrose	3.51E-02
142	GO:0042546: cell wall biogenesis	3.61E-02
143	GO:0009644: response to high light intensity	3.71E-02
144	GO:0008643: carbohydrate transport	3.71E-02
145	GO:0032259: methylation	3.94E-02
146	GO:0009751: response to salicylic acid	4.05E-02
147	GO:0006629: lipid metabolic process	4.11E-02
148	GO:0009664: plant-type cell wall organization	4.12E-02
149	GO:0006857: oligopeptide transport	4.55E-02
150	GO:0016310: phosphorylation	4.71E-02
151	GO:0030154: cell differentiation	4.90E-02
152	GO:0048367: shoot system development	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005534: galactose binding	0.00E+00
2	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0009922: fatty acid elongase activity	7.30E-13
4	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	4.59E-11
5	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	4.59E-11
6	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	4.59E-11
7	GO:0070330: aromatase activity	5.82E-09
8	GO:0018685: alkane 1-monooxygenase activity	1.91E-07
9	GO:0052747: sinapyl alcohol dehydrogenase activity	1.66E-06
10	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.04E-05
11	GO:0016746: transferase activity, transferring acyl groups	1.20E-05
12	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	4.89E-05
13	GO:0008809: carnitine racemase activity	1.60E-04
14	GO:0031957: very long-chain fatty acid-CoA ligase activity	1.60E-04
15	GO:0015200: methylammonium transmembrane transporter activity	1.60E-04
16	GO:0015245: fatty acid transporter activity	1.60E-04
17	GO:0015117: thiosulfate transmembrane transporter activity	3.65E-04
18	GO:1901677: phosphate transmembrane transporter activity	3.65E-04
19	GO:0016629: 12-oxophytodienoate reductase activity	3.65E-04
20	GO:0017040: ceramidase activity	3.65E-04
21	GO:0008083: growth factor activity	4.38E-04
22	GO:0005310: dicarboxylic acid transmembrane transporter activity	5.97E-04
23	GO:0015141: succinate transmembrane transporter activity	5.97E-04
24	GO:0047274: galactinol-sucrose galactosyltransferase activity	5.97E-04
25	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	5.97E-04
26	GO:0046423: allene-oxide cyclase activity	5.97E-04
27	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	5.97E-04
28	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	5.97E-04
29	GO:0004020: adenylylsulfate kinase activity	5.97E-04
30	GO:0052655: L-valine transaminase activity	8.53E-04
31	GO:0015131: oxaloacetate transmembrane transporter activity	8.53E-04
32	GO:0052656: L-isoleucine transaminase activity	8.53E-04
33	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	8.53E-04
34	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.53E-04
35	GO:0052654: L-leucine transaminase activity	8.53E-04
36	GO:0045330: aspartyl esterase activity	8.73E-04
37	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	9.85E-04
38	GO:0030599: pectinesterase activity	1.10E-03
39	GO:0004084: branched-chain-amino-acid transaminase activity	1.13E-03
40	GO:0008526: phosphatidylinositol transporter activity	1.13E-03
41	GO:0050378: UDP-glucuronate 4-epimerase activity	1.13E-03
42	GO:0015204: urea transmembrane transporter activity	1.13E-03
43	GO:0016772: transferase activity, transferring phosphorus-containing groups	1.43E-03
44	GO:0016791: phosphatase activity	1.74E-03
45	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.76E-03
46	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.76E-03
47	GO:0008519: ammonium transmembrane transporter activity	1.76E-03
48	GO:0102391: decanoate--CoA ligase activity	2.11E-03
49	GO:0015140: malate transmembrane transporter activity	2.48E-03
50	GO:0004467: long-chain fatty acid-CoA ligase activity	2.48E-03
51	GO:0015288: porin activity	2.88E-03
52	GO:0005506: iron ion binding	3.26E-03
53	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.72E-03
54	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.17E-03
55	GO:0016788: hydrolase activity, acting on ester bonds	4.21E-03
56	GO:0015116: sulfate transmembrane transporter activity	5.62E-03
57	GO:0005262: calcium channel activity	6.14E-03
58	GO:0015266: protein channel activity	6.14E-03
59	GO:0052689: carboxylic ester hydrolase activity	6.14E-03
60	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.58E-03
61	GO:0019825: oxygen binding	7.38E-03
62	GO:0051087: chaperone binding	8.97E-03
63	GO:0008514: organic anion transmembrane transporter activity	1.15E-02
64	GO:0008289: lipid binding	1.35E-02
65	GO:0010181: FMN binding	1.43E-02
66	GO:0003824: catalytic activity	1.45E-02
67	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.58E-02
68	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.85E-02
69	GO:0005200: structural constituent of cytoskeleton	1.89E-02
70	GO:0004674: protein serine/threonine kinase activity	1.95E-02
71	GO:0016413: O-acetyltransferase activity	1.97E-02
72	GO:0015250: water channel activity	2.05E-02
73	GO:0043565: sequence-specific DNA binding	2.10E-02
74	GO:0008168: methyltransferase activity	2.17E-02
75	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.30E-02
76	GO:0016740: transferase activity	2.36E-02
77	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.39E-02
78	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.47E-02
79	GO:0020037: heme binding	2.48E-02
80	GO:0005096: GTPase activator activity	2.56E-02
81	GO:0003993: acid phosphatase activity	3.02E-02
82	GO:0051287: NAD binding	4.02E-02
83	GO:0015171: amino acid transmembrane transporter activity	4.66E-02
84	GO:0031625: ubiquitin protein ligase binding	4.66E-02
85	GO:0008234: cysteine-type peptidase activity	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0009505: plant-type cell wall	1.36E-06
3	GO:0005618: cell wall	2.91E-05
4	GO:0016021: integral component of membrane	1.51E-04
5	GO:0009923: fatty acid elongase complex	1.60E-04
6	GO:0005783: endoplasmic reticulum	2.39E-04
7	GO:0031357: integral component of chloroplast inner membrane	3.65E-04
8	GO:0016020: membrane	5.51E-04
9	GO:0046658: anchored component of plasma membrane	5.74E-04
10	GO:0009897: external side of plasma membrane	5.97E-04
11	GO:0009331: glycerol-3-phosphate dehydrogenase complex	8.53E-04
12	GO:0009527: plastid outer membrane	1.13E-03
13	GO:0005576: extracellular region	1.35E-03
14	GO:0042807: central vacuole	2.48E-03
15	GO:0031305: integral component of mitochondrial inner membrane	2.88E-03
16	GO:0000326: protein storage vacuole	3.29E-03
17	GO:0046930: pore complex	3.29E-03
18	GO:0045298: tubulin complex	3.72E-03
19	GO:0016604: nuclear body	4.17E-03
20	GO:0009941: chloroplast envelope	6.39E-03
21	GO:0005743: mitochondrial inner membrane	8.09E-03
22	GO:0005773: vacuole	8.29E-03
23	GO:0031225: anchored component of membrane	8.47E-03
24	GO:0009506: plasmodesma	1.03E-02
25	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.15E-02
26	GO:0005886: plasma membrane	1.40E-02
27	GO:0071944: cell periphery	1.73E-02
28	GO:0032580: Golgi cisterna membrane	1.81E-02
29	GO:0010319: stromule	1.89E-02
30	GO:0005789: endoplasmic reticulum membrane	2.37E-02
31	GO:0009707: chloroplast outer membrane	2.47E-02
32	GO:0005802: trans-Golgi network	3.31E-02
33	GO:0005768: endosome	3.88E-02
34	GO:0005794: Golgi apparatus	4.66E-02