Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G29670

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0032958: inositol phosphate biosynthetic process3.25E-05
3GO:0000025: maltose catabolic process3.25E-05
4GO:0071712: ER-associated misfolded protein catabolic process8.18E-05
5GO:0032527: protein exit from endoplasmic reticulum8.18E-05
6GO:0080055: low-affinity nitrate transport1.42E-04
7GO:0032940: secretion by cell1.42E-04
8GO:0006020: inositol metabolic process2.11E-04
9GO:1901000: regulation of response to salt stress2.11E-04
10GO:0030100: regulation of endocytosis2.11E-04
11GO:0006021: inositol biosynthetic process2.85E-04
12GO:0010600: regulation of auxin biosynthetic process2.85E-04
13GO:0006461: protein complex assembly3.65E-04
14GO:0009913: epidermal cell differentiation4.48E-04
15GO:0009861: jasmonic acid and ethylene-dependent systemic resistance5.36E-04
16GO:0009955: adaxial/abaxial pattern specification5.36E-04
17GO:0071470: cellular response to osmotic stress5.36E-04
18GO:0010244: response to low fluence blue light stimulus by blue low-fluence system5.36E-04
19GO:0010161: red light signaling pathway6.27E-04
20GO:0009704: de-etiolation7.22E-04
21GO:0010928: regulation of auxin mediated signaling pathway7.22E-04
22GO:0009787: regulation of abscisic acid-activated signaling pathway7.22E-04
23GO:0006353: DNA-templated transcription, termination7.22E-04
24GO:0006783: heme biosynthetic process9.20E-04
25GO:0042761: very long-chain fatty acid biosynthetic process1.02E-03
26GO:0048268: clathrin coat assembly1.02E-03
27GO:0006782: protoporphyrinogen IX biosynthetic process1.13E-03
28GO:0005983: starch catabolic process1.36E-03
29GO:0006006: glucose metabolic process1.47E-03
30GO:0006094: gluconeogenesis1.47E-03
31GO:0010025: wax biosynthetic process1.85E-03
32GO:0010017: red or far-red light signaling pathway2.40E-03
33GO:0006012: galactose metabolic process2.55E-03
34GO:0000271: polysaccharide biosynthetic process3.00E-03
35GO:0045489: pectin biosynthetic process3.15E-03
36GO:0048825: cotyledon development3.47E-03
37GO:0008654: phospholipid biosynthetic process3.47E-03
38GO:0030163: protein catabolic process3.97E-03
39GO:0009607: response to biotic stimulus4.85E-03
40GO:0006629: lipid metabolic process4.94E-03
41GO:0006974: cellular response to DNA damage stimulus5.04E-03
42GO:0015995: chlorophyll biosynthetic process5.22E-03
43GO:0009817: defense response to fungus, incompatible interaction5.60E-03
44GO:0016051: carbohydrate biosynthetic process6.60E-03
45GO:0006897: endocytosis7.43E-03
46GO:0008283: cell proliferation7.87E-03
47GO:0051707: response to other organism7.87E-03
48GO:0000209: protein polyubiquitination8.09E-03
49GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process8.99E-03
50GO:0042538: hyperosmotic salinity response9.22E-03
51GO:0009585: red, far-red light phototransduction9.69E-03
52GO:0006857: oligopeptide transport1.02E-02
53GO:0006096: glycolytic process1.09E-02
54GO:0006355: regulation of transcription, DNA-templated1.11E-02
55GO:0009058: biosynthetic process1.51E-02
56GO:0009845: seed germination1.54E-02
57GO:0006633: fatty acid biosynthetic process1.71E-02
58GO:0071555: cell wall organization1.78E-02
59GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.98E-02
60GO:0005975: carbohydrate metabolic process2.70E-02
61GO:0048366: leaf development2.80E-02
62GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.98E-02
63GO:0045454: cell redox homeostasis3.31E-02
64GO:0032259: methylation3.72E-02
65GO:0009408: response to heat3.84E-02
66GO:0009753: response to jasmonic acid4.04E-02
67GO:0008152: metabolic process4.12E-02
RankGO TermAdjusted P value
1GO:0004134: 4-alpha-glucanotransferase activity3.25E-05
2GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.25E-05
3GO:0000829: inositol heptakisphosphate kinase activity3.25E-05
4GO:0000828: inositol hexakisphosphate kinase activity3.25E-05
5GO:0004853: uroporphyrinogen decarboxylase activity3.25E-05
6GO:0018708: thiol S-methyltransferase activity8.18E-05
7GO:0044390: ubiquitin-like protein conjugating enzyme binding8.18E-05
8GO:0004512: inositol-3-phosphate synthase activity8.18E-05
9GO:0080054: low-affinity nitrate transmembrane transporter activity1.42E-04
10GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway2.85E-04
11GO:0004332: fructose-bisphosphate aldolase activity4.48E-04
12GO:0004034: aldose 1-epimerase activity7.22E-04
13GO:0005545: 1-phosphatidylinositol binding1.13E-03
14GO:0047372: acylglycerol lipase activity1.24E-03
15GO:0004565: beta-galactosidase activity1.47E-03
16GO:0004190: aspartic-type endopeptidase activity1.72E-03
17GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.85E-03
18GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.85E-03
19GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.85E-03
20GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.40E-03
21GO:0003713: transcription coactivator activity3.15E-03
22GO:0030276: clathrin binding3.15E-03
23GO:0016853: isomerase activity3.31E-03
24GO:0061630: ubiquitin protein ligase activity3.53E-03
25GO:0048038: quinone binding3.63E-03
26GO:0031625: ubiquitin protein ligase binding1.04E-02
27GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.11E-02
28GO:0016746: transferase activity, transferring acyl groups1.27E-02
29GO:0016758: transferase activity, transferring hexosyl groups1.43E-02
30GO:0043565: sequence-specific DNA binding2.39E-02
31GO:0008168: methyltransferase activity2.43E-02
32GO:0004842: ubiquitin-protein transferase activity2.46E-02
33GO:0003700: transcription factor activity, sequence-specific DNA binding3.04E-02
34GO:0042803: protein homodimerization activity3.42E-02
35GO:0009055: electron carrier activity4.04E-02
36GO:0008289: lipid binding4.85E-02
RankGO TermAdjusted P value
1GO:0036513: Derlin-1 retrotranslocation complex2.11E-04
2GO:0005798: Golgi-associated vesicle4.48E-04
3GO:0009501: amyloplast7.22E-04
4GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)9.20E-04
5GO:0005769: early endosome1.85E-03
6GO:0005905: clathrin-coated pit2.26E-03
7GO:0030136: clathrin-coated vesicle2.84E-03
8GO:0009507: chloroplast6.02E-03
9GO:0009505: plant-type cell wall2.23E-02
10GO:0009570: chloroplast stroma3.26E-02
11GO:0005783: endoplasmic reticulum3.52E-02
12GO:0005794: Golgi apparatus3.78E-02
13GO:0009535: chloroplast thylakoid membrane3.98E-02
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Gene type



Gene DE type