co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G29240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051553: flavone biosynthetic process	0.00E+00
2	GO:0001881: receptor recycling	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0009627: systemic acquired resistance	5.53E-08
5	GO:0042742: defense response to bacterium	7.25E-08
6	GO:0051707: response to other organism	1.52E-05
7	GO:0010266: response to vitamin B1	2.53E-05
8	GO:0009751: response to salicylic acid	2.97E-05
9	GO:0009626: plant-type hypersensitive response	3.58E-05
10	GO:0050832: defense response to fungus	3.65E-05
11	GO:0080183: response to photooxidative stress	6.44E-05
12	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.44E-05
13	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.13E-04
14	GO:0010272: response to silver ion	1.13E-04
15	GO:0008333: endosome to lysosome transport	1.13E-04
16	GO:0006623: protein targeting to vacuole	1.20E-04
17	GO:0009617: response to bacterium	1.28E-04
18	GO:0002229: defense response to oomycetes	1.30E-04
19	GO:0002239: response to oomycetes	1.69E-04
20	GO:0009615: response to virus	1.93E-04
21	GO:0071219: cellular response to molecule of bacterial origin	2.30E-04
22	GO:0080142: regulation of salicylic acid biosynthetic process	2.30E-04
23	GO:0009759: indole glucosinolate biosynthetic process	3.65E-04
24	GO:0031347: regulation of defense response	5.00E-04
25	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.11E-04
26	GO:0071446: cellular response to salicylic acid stimulus	5.11E-04
27	GO:1900056: negative regulation of leaf senescence	5.11E-04
28	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.89E-04
29	GO:0009819: drought recovery	5.89E-04
30	GO:0010120: camalexin biosynthetic process	6.69E-04
31	GO:0010204: defense response signaling pathway, resistance gene-independent	6.69E-04
32	GO:0010112: regulation of systemic acquired resistance	7.52E-04
33	GO:1900426: positive regulation of defense response to bacterium	8.38E-04
34	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.38E-04
35	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.24E-04
36	GO:0006032: chitin catabolic process	9.24E-04
37	GO:0000272: polysaccharide catabolic process	1.01E-03
38	GO:0007034: vacuolar transport	1.30E-03
39	GO:0002237: response to molecule of bacterial origin	1.30E-03
40	GO:0016998: cell wall macromolecule catabolic process	1.83E-03
41	GO:0071456: cellular response to hypoxia	1.95E-03
42	GO:0042147: retrograde transport, endosome to Golgi	2.30E-03
43	GO:0051607: defense response to virus	3.63E-03
44	GO:0009753: response to jasmonic acid	3.87E-03
45	GO:0006950: response to stress	4.21E-03
46	GO:0009813: flavonoid biosynthetic process	4.67E-03
47	GO:0009867: jasmonic acid mediated signaling pathway	5.31E-03
48	GO:0009664: plant-type cell wall organization	7.40E-03
49	GO:0010224: response to UV-B	7.97E-03
50	GO:0009620: response to fungus	9.34E-03
51	GO:0009414: response to water deprivation	1.26E-02
52	GO:0006355: regulation of transcription, DNA-templated	1.40E-02
53	GO:0007623: circadian rhythm	1.46E-02
54	GO:0010150: leaf senescence	1.46E-02
55	GO:0006470: protein dephosphorylation	1.61E-02
56	GO:0007166: cell surface receptor signaling pathway	1.61E-02
57	GO:0055114: oxidation-reduction process	1.71E-02
58	GO:0006970: response to osmotic stress	2.10E-02
59	GO:0080167: response to karrikin	2.32E-02
60	GO:0010200: response to chitin	2.38E-02
61	GO:0044550: secondary metabolite biosynthetic process	2.47E-02
62	GO:0045454: cell redox homeostasis	2.64E-02
63	GO:0045892: negative regulation of transcription, DNA-templated	2.67E-02
64	GO:0006886: intracellular protein transport	2.70E-02
65	GO:0006869: lipid transport	2.82E-02
66	GO:0006629: lipid metabolic process	3.07E-02
67	GO:0016310: phosphorylation	3.18E-02
68	GO:0009735: response to cytokinin	4.33E-02
69	GO:0006351: transcription, DNA-templated	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0035529: NADH pyrophosphatase activity	1.69E-04
3	GO:0047631: ADP-ribose diphosphatase activity	2.95E-04
4	GO:0004040: amidase activity	2.95E-04
5	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.23E-04
6	GO:0004722: protein serine/threonine phosphatase activity	3.53E-04
7	GO:0000210: NAD+ diphosphatase activity	3.65E-04
8	GO:0004656: procollagen-proline 4-dioxygenase activity	4.36E-04
9	GO:0004568: chitinase activity	9.24E-04
10	GO:0016787: hydrolase activity	9.56E-04
11	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.86E-04
12	GO:0008061: chitin binding	1.40E-03
13	GO:0003712: transcription cofactor activity	1.40E-03
14	GO:0031418: L-ascorbic acid binding	1.61E-03
15	GO:0005509: calcium ion binding	1.82E-03
16	GO:0005506: iron ion binding	1.98E-03
17	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.18E-03
18	GO:0003727: single-stranded RNA binding	2.18E-03
19	GO:0004497: monooxygenase activity	2.46E-03
20	GO:0005199: structural constituent of cell wall	2.55E-03
21	GO:0001085: RNA polymerase II transcription factor binding	2.55E-03
22	GO:0043565: sequence-specific DNA binding	3.55E-03
23	GO:0030247: polysaccharide binding	4.21E-03
24	GO:0004806: triglyceride lipase activity	4.21E-03
25	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.99E-03
26	GO:0050661: NADP binding	5.81E-03
27	GO:0051537: 2 iron, 2 sulfur cluster binding	6.67E-03
28	GO:0051287: NAD binding	7.22E-03
29	GO:0019825: oxygen binding	9.07E-03
30	GO:0005516: calmodulin binding	9.59E-03
31	GO:0015035: protein disulfide oxidoreductase activity	1.02E-02
32	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.28E-02
33	GO:0020037: heme binding	2.04E-02
34	GO:0003682: chromatin binding	2.07E-02
35	GO:0043531: ADP binding	2.13E-02
36	GO:0050660: flavin adenine dinucleotide binding	2.21E-02
37	GO:0046872: metal ion binding	2.31E-02
38	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.79E-02
39	GO:0009055: electron carrier activity	3.23E-02
40	GO:0008289: lipid binding	3.88E-02
41	GO:0016887: ATPase activity	4.19E-02
42	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0009530: primary cell wall	1.13E-04
2	GO:0005771: multivesicular body	3.65E-04
3	GO:0030904: retromer complex	3.65E-04
4	GO:0017119: Golgi transport complex	9.24E-04
5	GO:0005667: transcription factor complex	4.06E-03
6	GO:0031902: late endosome membrane	5.98E-03
7	GO:0031225: anchored component of membrane	9.94E-03
8	GO:0005802: trans-Golgi network	1.02E-02
9	GO:0048046: apoplast	1.03E-02
10	GO:0005768: endosome	1.16E-02
11	GO:0009505: plant-type cell wall	1.62E-02
12	GO:0043231: intracellular membrane-bounded organelle	3.29E-02
13	GO:0005887: integral component of plasma membrane	3.82E-02
14	GO:0005576: extracellular region	4.43E-02