Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G28940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009236: cobalamin biosynthetic process0.00E+00
2GO:0009853: photorespiration3.01E-09
3GO:0019354: siroheme biosynthetic process6.71E-06
4GO:0031539: positive regulation of anthocyanin metabolic process6.71E-06
5GO:0009963: positive regulation of flavonoid biosynthetic process5.17E-05
6GO:0006120: mitochondrial electron transport, NADH to ubiquinone1.46E-04
7GO:0022904: respiratory electron transport chain1.74E-04
8GO:0009787: regulation of abscisic acid-activated signaling pathway2.03E-04
9GO:0010099: regulation of photomorphogenesis2.33E-04
10GO:0022900: electron transport chain2.33E-04
11GO:0042753: positive regulation of circadian rhythm5.39E-04
12GO:0010017: red or far-red light signaling pathway6.92E-04
13GO:0009958: positive gravitropism8.97E-04
14GO:0010218: response to far red light1.65E-03
15GO:0006099: tricarboxylic acid cycle1.86E-03
16GO:0010114: response to red light2.14E-03
17GO:0009640: photomorphogenesis2.14E-03
18GO:0009585: red, far-red light phototransduction2.62E-03
19GO:0010224: response to UV-B2.68E-03
20GO:0009740: gibberellic acid mediated signaling pathway3.19E-03
21GO:0010228: vegetative to reproductive phase transition of meristem4.97E-03
22GO:0009737: response to abscisic acid5.46E-03
23GO:0080167: response to karrikin7.55E-03
24GO:0009735: response to cytokinin1.40E-02
25GO:0006979: response to oxidative stress2.47E-02
RankGO TermAdjusted P value
1GO:0016852: sirohydrochlorin cobaltochelatase activity0.00E+00
2GO:0051266: sirohydrochlorin ferrochelatase activity0.00E+00
3GO:0004129: cytochrome-c oxidase activity2.46E-06
4GO:0016651: oxidoreductase activity, acting on NAD(P)H9.53E-05
5GO:0008121: ubiquinol-cytochrome-c reductase activity1.74E-04
6GO:0047617: acyl-CoA hydrolase activity2.95E-04
7GO:0004089: carbonate dehydratase activity4.30E-04
8GO:0051536: iron-sulfur cluster binding5.76E-04
9GO:0008137: NADH dehydrogenase (ubiquinone) activity1.02E-03
10GO:0051539: 4 iron, 4 sulfur cluster binding1.97E-03
11GO:0003690: double-stranded DNA binding2.68E-03
12GO:0016746: transferase activity, transferring acyl groups3.38E-03
13GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding4.22E-03
14GO:0042802: identical protein binding5.68E-03
15GO:0016788: hydrolase activity, acting on ester bonds6.59E-03
RankGO TermAdjusted P value
1GO:0005747: mitochondrial respiratory chain complex I4.28E-13
2GO:0045271: respiratory chain complex I5.55E-11
3GO:0031966: mitochondrial membrane9.21E-09
4GO:0005739: mitochondrion3.37E-08
5GO:0005750: mitochondrial respiratory chain complex III4.12E-06
6GO:0005751: mitochondrial respiratory chain complex IV3.35E-05
7GO:0045273: respiratory chain complex II2.03E-04
8GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)2.03E-04
9GO:0005753: mitochondrial proton-transporting ATP synthase complex5.02E-04
10GO:0005758: mitochondrial intermembrane space5.76E-04
11GO:0016020: membrane9.74E-03
12GO:0005777: peroxisome1.64E-02
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Gene type



Gene DE type