GO Enrichment Analysis of Co-expressed Genes with
AT3G26650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 4 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 1.62E-07 |
| 6 | GO:0010028: xanthophyll cycle | 3.50E-05 |
| 7 | GO:0051775: response to redox state | 3.50E-05 |
| 8 | GO:0071277: cellular response to calcium ion | 3.50E-05 |
| 9 | GO:0006006: glucose metabolic process | 4.39E-05 |
| 10 | GO:0019253: reductive pentose-phosphate cycle | 5.08E-05 |
| 11 | GO:0019752: carboxylic acid metabolic process | 8.78E-05 |
| 12 | GO:0030187: melatonin biosynthetic process | 8.78E-05 |
| 13 | GO:0042853: L-alanine catabolic process | 8.78E-05 |
| 14 | GO:0006435: threonyl-tRNA aminoacylation | 8.78E-05 |
| 15 | GO:0055114: oxidation-reduction process | 9.72E-05 |
| 16 | GO:0090391: granum assembly | 1.52E-04 |
| 17 | GO:0009405: pathogenesis | 1.52E-04 |
| 18 | GO:0019761: glucosinolate biosynthetic process | 2.16E-04 |
| 19 | GO:0046739: transport of virus in multicellular host | 2.25E-04 |
| 20 | GO:0009067: aspartate family amino acid biosynthetic process | 2.25E-04 |
| 21 | GO:0006107: oxaloacetate metabolic process | 2.25E-04 |
| 22 | GO:0006734: NADH metabolic process | 3.05E-04 |
| 23 | GO:0009902: chloroplast relocation | 3.05E-04 |
| 24 | GO:0009658: chloroplast organization | 3.23E-04 |
| 25 | GO:0043097: pyrimidine nucleoside salvage | 3.89E-04 |
| 26 | GO:0006206: pyrimidine nucleobase metabolic process | 4.78E-04 |
| 27 | GO:0009853: photorespiration | 4.85E-04 |
| 28 | GO:0009088: threonine biosynthetic process | 5.70E-04 |
| 29 | GO:0071470: cellular response to osmotic stress | 5.70E-04 |
| 30 | GO:0010114: response to red light | 6.19E-04 |
| 31 | GO:0009772: photosynthetic electron transport in photosystem II | 6.66E-04 |
| 32 | GO:0010196: nonphotochemical quenching | 6.66E-04 |
| 33 | GO:0009704: de-etiolation | 7.68E-04 |
| 34 | GO:0048564: photosystem I assembly | 7.68E-04 |
| 35 | GO:0009657: plastid organization | 8.71E-04 |
| 36 | GO:0090333: regulation of stomatal closure | 9.78E-04 |
| 37 | GO:0006754: ATP biosynthetic process | 9.78E-04 |
| 38 | GO:0098656: anion transmembrane transport | 9.78E-04 |
| 39 | GO:0009051: pentose-phosphate shunt, oxidative branch | 9.78E-04 |
| 40 | GO:0009098: leucine biosynthetic process | 1.09E-03 |
| 41 | GO:0006949: syncytium formation | 1.20E-03 |
| 42 | GO:0009735: response to cytokinin | 1.26E-03 |
| 43 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.32E-03 |
| 44 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.32E-03 |
| 45 | GO:0009058: biosynthetic process | 1.50E-03 |
| 46 | GO:0006108: malate metabolic process | 1.57E-03 |
| 47 | GO:0010207: photosystem II assembly | 1.70E-03 |
| 48 | GO:0080147: root hair cell development | 2.12E-03 |
| 49 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.26E-03 |
| 50 | GO:0007017: microtubule-based process | 2.26E-03 |
| 51 | GO:0009625: response to insect | 2.71E-03 |
| 52 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.71E-03 |
| 53 | GO:0006606: protein import into nucleus | 3.20E-03 |
| 54 | GO:0015986: ATP synthesis coupled proton transport | 3.53E-03 |
| 55 | GO:0009791: post-embryonic development | 3.70E-03 |
| 56 | GO:0016032: viral process | 4.06E-03 |
| 57 | GO:0015979: photosynthesis | 4.21E-03 |
| 58 | GO:0009828: plant-type cell wall loosening | 4.42E-03 |
| 59 | GO:0010027: thylakoid membrane organization | 4.99E-03 |
| 60 | GO:0032259: methylation | 5.21E-03 |
| 61 | GO:0018298: protein-chromophore linkage | 5.99E-03 |
| 62 | GO:0010218: response to far red light | 6.40E-03 |
| 63 | GO:0006811: ion transport | 6.40E-03 |
| 64 | GO:0009637: response to blue light | 7.05E-03 |
| 65 | GO:0034599: cellular response to oxidative stress | 7.27E-03 |
| 66 | GO:0006099: tricarboxylic acid cycle | 7.27E-03 |
| 67 | GO:0009664: plant-type cell wall organization | 9.86E-03 |
| 68 | GO:0009793: embryo development ending in seed dormancy | 9.90E-03 |
| 69 | GO:0009585: red, far-red light phototransduction | 1.04E-02 |
| 70 | GO:0006417: regulation of translation | 1.11E-02 |
| 71 | GO:0006096: glycolytic process | 1.17E-02 |
| 72 | GO:0006396: RNA processing | 1.36E-02 |
| 73 | GO:0009845: seed germination | 1.65E-02 |
| 74 | GO:0006413: translational initiation | 1.86E-02 |
| 75 | GO:0009826: unidimensional cell growth | 2.60E-02 |
| 76 | GO:0080167: response to karrikin | 3.11E-02 |
| 77 | GO:0006397: mRNA processing | 4.24E-02 |
| 78 | GO:0048364: root development | 4.24E-02 |
| 79 | GO:0008152: metabolic process | 4.41E-02 |
| 80 | GO:0016310: phosphorylation | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 2 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 3 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 4 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 5 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 6 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 7 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 8 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 9 | GO:0008453: alanine-glyoxylate transaminase activity | 1.51E-06 |
| 10 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.50E-05 |
| 11 | GO:0008746: NAD(P)+ transhydrogenase activity | 3.50E-05 |
| 12 | GO:0004451: isocitrate lyase activity | 3.50E-05 |
| 13 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 3.50E-05 |
| 14 | GO:0010177: 2-(2'-methylthio)ethylmalate synthase activity | 3.50E-05 |
| 15 | GO:0016630: protochlorophyllide reductase activity | 8.78E-05 |
| 16 | GO:0004829: threonine-tRNA ligase activity | 8.78E-05 |
| 17 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 8.78E-05 |
| 18 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 8.78E-05 |
| 19 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.52E-04 |
| 20 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.52E-04 |
| 21 | GO:0004072: aspartate kinase activity | 2.25E-04 |
| 22 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 2.25E-04 |
| 23 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 3.05E-04 |
| 24 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 3.05E-04 |
| 25 | GO:0003959: NADPH dehydrogenase activity | 3.89E-04 |
| 26 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 3.89E-04 |
| 27 | GO:0016615: malate dehydrogenase activity | 4.78E-04 |
| 28 | GO:0000293: ferric-chelate reductase activity | 4.78E-04 |
| 29 | GO:0050661: NADP binding | 5.49E-04 |
| 30 | GO:0004849: uridine kinase activity | 5.70E-04 |
| 31 | GO:0030060: L-malate dehydrogenase activity | 5.70E-04 |
| 32 | GO:0051287: NAD binding | 7.44E-04 |
| 33 | GO:0008135: translation factor activity, RNA binding | 8.71E-04 |
| 34 | GO:0030234: enzyme regulator activity | 1.20E-03 |
| 35 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.32E-03 |
| 36 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.57E-03 |
| 37 | GO:0031409: pigment binding | 1.97E-03 |
| 38 | GO:0003727: single-stranded RNA binding | 2.87E-03 |
| 39 | GO:0008514: organic anion transmembrane transporter activity | 2.87E-03 |
| 40 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.36E-03 |
| 41 | GO:0008080: N-acetyltransferase activity | 3.36E-03 |
| 42 | GO:0016597: amino acid binding | 4.80E-03 |
| 43 | GO:0016491: oxidoreductase activity | 4.84E-03 |
| 44 | GO:0016168: chlorophyll binding | 5.18E-03 |
| 45 | GO:0003746: translation elongation factor activity | 7.05E-03 |
| 46 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.88E-03 |
| 47 | GO:0043621: protein self-association | 8.88E-03 |
| 48 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.59E-02 |
| 49 | GO:0030170: pyridoxal phosphate binding | 1.68E-02 |
| 50 | GO:0008565: protein transporter activity | 1.77E-02 |
| 51 | GO:0008168: methyltransferase activity | 2.60E-02 |
| 52 | GO:0000287: magnesium ion binding | 2.64E-02 |
| 53 | GO:0003924: GTPase activity | 4.11E-02 |
| 54 | GO:0009055: electron carrier activity | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.49E-23 |
| 2 | GO:0009941: chloroplast envelope | 1.06E-14 |
| 3 | GO:0009579: thylakoid | 3.11E-14 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 5.77E-14 |
| 5 | GO:0009570: chloroplast stroma | 1.13E-13 |
| 6 | GO:0009534: chloroplast thylakoid | 1.88E-09 |
| 7 | GO:0009515: granal stacked thylakoid | 3.50E-05 |
| 8 | GO:0009706: chloroplast inner membrane | 8.15E-05 |
| 9 | GO:0009544: chloroplast ATP synthase complex | 3.05E-04 |
| 10 | GO:0030286: dynein complex | 3.05E-04 |
| 11 | GO:0031969: chloroplast membrane | 4.25E-04 |
| 12 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 4.78E-04 |
| 13 | GO:0031977: thylakoid lumen | 5.72E-04 |
| 14 | GO:0048046: apoplast | 8.83E-04 |
| 15 | GO:0010287: plastoglobule | 1.35E-03 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 1.42E-03 |
| 17 | GO:0030095: chloroplast photosystem II | 1.70E-03 |
| 18 | GO:0042651: thylakoid membrane | 2.26E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 2.26E-03 |
| 20 | GO:0009522: photosystem I | 3.53E-03 |
| 21 | GO:0009523: photosystem II | 3.70E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 3.70E-03 |
| 23 | GO:0010319: stromule | 4.60E-03 |
| 24 | GO:0016020: membrane | 4.79E-03 |
| 25 | GO:0009707: chloroplast outer membrane | 5.99E-03 |
| 26 | GO:0005777: peroxisome | 1.11E-02 |
| 27 | GO:0005623: cell | 1.59E-02 |
| 28 | GO:0009536: plastid | 2.40E-02 |