GO Enrichment Analysis of Co-expressed Genes with
AT3G26570
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0033317: pantothenate biosynthetic process from valine | 0.00E+00 |
2 | GO:0009583: detection of light stimulus | 0.00E+00 |
3 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
4 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
5 | GO:0010477: response to sulfur dioxide | 0.00E+00 |
6 | GO:0071000: response to magnetism | 0.00E+00 |
7 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
8 | GO:0009661: chromoplast organization | 0.00E+00 |
9 | GO:0009902: chloroplast relocation | 1.42E-07 |
10 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.85E-06 |
11 | GO:0055114: oxidation-reduction process | 2.17E-05 |
12 | GO:0009658: chloroplast organization | 2.24E-05 |
13 | GO:0016120: carotene biosynthetic process | 4.65E-05 |
14 | GO:0010190: cytochrome b6f complex assembly | 6.86E-05 |
15 | GO:0009903: chloroplast avoidance movement | 9.52E-05 |
16 | GO:0006430: lysyl-tRNA aminoacylation | 1.98E-04 |
17 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 1.98E-04 |
18 | GO:0010362: negative regulation of anion channel activity by blue light | 1.98E-04 |
19 | GO:1902265: abscisic acid homeostasis | 1.98E-04 |
20 | GO:0072387: flavin adenine dinucleotide metabolic process | 1.98E-04 |
21 | GO:0071461: cellular response to redox state | 1.98E-04 |
22 | GO:0009638: phototropism | 2.92E-04 |
23 | GO:0015995: chlorophyll biosynthetic process | 3.58E-04 |
24 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.43E-04 |
25 | GO:1901529: positive regulation of anion channel activity | 4.43E-04 |
26 | GO:2000030: regulation of response to red or far red light | 4.43E-04 |
27 | GO:0006898: receptor-mediated endocytosis | 4.43E-04 |
28 | GO:0080005: photosystem stoichiometry adjustment | 4.43E-04 |
29 | GO:0010617: circadian regulation of calcium ion oscillation | 4.43E-04 |
30 | GO:0007154: cell communication | 4.43E-04 |
31 | GO:0099402: plant organ development | 4.43E-04 |
32 | GO:1904143: positive regulation of carotenoid biosynthetic process | 4.43E-04 |
33 | GO:0080183: response to photooxidative stress | 4.43E-04 |
34 | GO:0043100: pyrimidine nucleobase salvage | 4.43E-04 |
35 | GO:0006508: proteolysis | 5.30E-04 |
36 | GO:0009637: response to blue light | 5.54E-04 |
37 | GO:0031022: nuclear migration along microfilament | 7.22E-04 |
38 | GO:1902448: positive regulation of shade avoidance | 7.22E-04 |
39 | GO:0019419: sulfate reduction | 7.22E-04 |
40 | GO:1901672: positive regulation of systemic acquired resistance | 7.22E-04 |
41 | GO:1901562: response to paraquat | 7.22E-04 |
42 | GO:0015940: pantothenate biosynthetic process | 7.22E-04 |
43 | GO:0006696: ergosterol biosynthetic process | 7.22E-04 |
44 | GO:0044375: regulation of peroxisome size | 7.22E-04 |
45 | GO:0010371: regulation of gibberellin biosynthetic process | 1.03E-03 |
46 | GO:1901332: negative regulation of lateral root development | 1.03E-03 |
47 | GO:0050482: arachidonic acid secretion | 1.03E-03 |
48 | GO:2001141: regulation of RNA biosynthetic process | 1.03E-03 |
49 | GO:0016226: iron-sulfur cluster assembly | 1.05E-03 |
50 | GO:0016117: carotenoid biosynthetic process | 1.34E-03 |
51 | GO:0070534: protein K63-linked ubiquitination | 1.37E-03 |
52 | GO:0015994: chlorophyll metabolic process | 1.37E-03 |
53 | GO:0071585: detoxification of cadmium ion | 1.37E-03 |
54 | GO:0071483: cellular response to blue light | 1.37E-03 |
55 | GO:1902347: response to strigolactone | 1.37E-03 |
56 | GO:0034613: cellular protein localization | 1.37E-03 |
57 | GO:0010021: amylopectin biosynthetic process | 1.37E-03 |
58 | GO:0010118: stomatal movement | 1.45E-03 |
59 | GO:0000304: response to singlet oxygen | 1.74E-03 |
60 | GO:0010117: photoprotection | 1.74E-03 |
61 | GO:0046283: anthocyanin-containing compound metabolic process | 1.74E-03 |
62 | GO:0009904: chloroplast accumulation movement | 1.74E-03 |
63 | GO:0010236: plastoquinone biosynthetic process | 1.74E-03 |
64 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.74E-03 |
65 | GO:0035434: copper ion transmembrane transport | 1.74E-03 |
66 | GO:0045454: cell redox homeostasis | 2.05E-03 |
67 | GO:0006555: methionine metabolic process | 2.14E-03 |
68 | GO:1901371: regulation of leaf morphogenesis | 2.14E-03 |
69 | GO:0060918: auxin transport | 2.14E-03 |
70 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 2.14E-03 |
71 | GO:0006301: postreplication repair | 2.14E-03 |
72 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.14E-03 |
73 | GO:0009648: photoperiodism | 2.57E-03 |
74 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.57E-03 |
75 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.57E-03 |
76 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.57E-03 |
77 | GO:0010189: vitamin E biosynthetic process | 2.57E-03 |
78 | GO:0010019: chloroplast-nucleus signaling pathway | 2.57E-03 |
79 | GO:0051510: regulation of unidimensional cell growth | 3.03E-03 |
80 | GO:0010038: response to metal ion | 3.03E-03 |
81 | GO:0050790: regulation of catalytic activity | 3.03E-03 |
82 | GO:0016559: peroxisome fission | 3.51E-03 |
83 | GO:0006644: phospholipid metabolic process | 3.51E-03 |
84 | GO:0048564: photosystem I assembly | 3.51E-03 |
85 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 3.51E-03 |
86 | GO:0050821: protein stabilization | 3.51E-03 |
87 | GO:0009231: riboflavin biosynthetic process | 3.51E-03 |
88 | GO:0006102: isocitrate metabolic process | 3.51E-03 |
89 | GO:0018298: protein-chromophore linkage | 3.59E-03 |
90 | GO:0071482: cellular response to light stimulus | 4.02E-03 |
91 | GO:0015996: chlorophyll catabolic process | 4.02E-03 |
92 | GO:0009821: alkaloid biosynthetic process | 4.54E-03 |
93 | GO:1900426: positive regulation of defense response to bacterium | 5.10E-03 |
94 | GO:0009098: leucine biosynthetic process | 5.10E-03 |
95 | GO:0009970: cellular response to sulfate starvation | 5.67E-03 |
96 | GO:0006995: cellular response to nitrogen starvation | 5.67E-03 |
97 | GO:0000103: sulfate assimilation | 5.67E-03 |
98 | GO:0009640: photomorphogenesis | 5.85E-03 |
99 | GO:0008285: negative regulation of cell proliferation | 6.27E-03 |
100 | GO:0043085: positive regulation of catalytic activity | 6.27E-03 |
101 | GO:0006879: cellular iron ion homeostasis | 6.27E-03 |
102 | GO:0006352: DNA-templated transcription, initiation | 6.27E-03 |
103 | GO:0016485: protein processing | 6.27E-03 |
104 | GO:0009644: response to high light intensity | 6.33E-03 |
105 | GO:0006790: sulfur compound metabolic process | 6.89E-03 |
106 | GO:0035556: intracellular signal transduction | 7.33E-03 |
107 | GO:0010075: regulation of meristem growth | 7.52E-03 |
108 | GO:0009767: photosynthetic electron transport chain | 7.52E-03 |
109 | GO:0009785: blue light signaling pathway | 7.52E-03 |
110 | GO:0030048: actin filament-based movement | 7.52E-03 |
111 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.16E-03 |
112 | GO:0010207: photosystem II assembly | 8.19E-03 |
113 | GO:0007015: actin filament organization | 8.19E-03 |
114 | GO:0007031: peroxisome organization | 8.87E-03 |
115 | GO:0006071: glycerol metabolic process | 9.57E-03 |
116 | GO:0019344: cysteine biosynthetic process | 1.03E-02 |
117 | GO:0051017: actin filament bundle assembly | 1.03E-02 |
118 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.03E-02 |
119 | GO:0008299: isoprenoid biosynthetic process | 1.10E-02 |
120 | GO:0006418: tRNA aminoacylation for protein translation | 1.10E-02 |
121 | GO:0010073: meristem maintenance | 1.10E-02 |
122 | GO:0006825: copper ion transport | 1.10E-02 |
123 | GO:0009693: ethylene biosynthetic process | 1.34E-02 |
124 | GO:0010227: floral organ abscission | 1.34E-02 |
125 | GO:0009058: biosynthetic process | 1.49E-02 |
126 | GO:0006520: cellular amino acid metabolic process | 1.67E-02 |
127 | GO:0006662: glycerol ether metabolic process | 1.67E-02 |
128 | GO:0010182: sugar mediated signaling pathway | 1.67E-02 |
129 | GO:0042752: regulation of circadian rhythm | 1.76E-02 |
130 | GO:0009646: response to absence of light | 1.76E-02 |
131 | GO:0019252: starch biosynthetic process | 1.85E-02 |
132 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.94E-02 |
133 | GO:0007623: circadian rhythm | 1.95E-02 |
134 | GO:0019761: glucosinolate biosynthetic process | 2.04E-02 |
135 | GO:0030163: protein catabolic process | 2.13E-02 |
136 | GO:0016126: sterol biosynthetic process | 2.53E-02 |
137 | GO:0010029: regulation of seed germination | 2.63E-02 |
138 | GO:0042128: nitrate assimilation | 2.73E-02 |
139 | GO:0010411: xyloglucan metabolic process | 2.84E-02 |
140 | GO:0006950: response to stress | 2.84E-02 |
141 | GO:0048481: plant ovule development | 3.05E-02 |
142 | GO:0008219: cell death | 3.05E-02 |
143 | GO:0000160: phosphorelay signal transduction system | 3.16E-02 |
144 | GO:0006811: ion transport | 3.27E-02 |
145 | GO:0010218: response to far red light | 3.27E-02 |
146 | GO:0007568: aging | 3.38E-02 |
147 | GO:0010043: response to zinc ion | 3.38E-02 |
148 | GO:0006099: tricarboxylic acid cycle | 3.73E-02 |
149 | GO:0034599: cellular response to oxidative stress | 3.73E-02 |
150 | GO:0046777: protein autophosphorylation | 3.99E-02 |
151 | GO:0042542: response to hydrogen peroxide | 4.20E-02 |
152 | GO:0015979: photosynthesis | 4.26E-02 |
153 | GO:0010114: response to red light | 4.32E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004592: pantoate-beta-alanine ligase activity | 0.00E+00 |
2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
3 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
4 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
5 | GO:0050486: intramolecular transferase activity, transferring hydroxy groups | 0.00E+00 |
6 | GO:0015205: nucleobase transmembrane transporter activity | 0.00E+00 |
7 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
8 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
9 | GO:0046905: phytoene synthase activity | 0.00E+00 |
10 | GO:0008482: sulfite oxidase activity | 0.00E+00 |
11 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
12 | GO:0004180: carboxypeptidase activity | 6.80E-06 |
13 | GO:0004848: ureidoglycolate hydrolase activity | 6.80E-06 |
14 | GO:0016851: magnesium chelatase activity | 1.57E-05 |
15 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 1.57E-05 |
16 | GO:0009882: blue light photoreceptor activity | 1.57E-05 |
17 | GO:0016491: oxidoreductase activity | 3.99E-05 |
18 | GO:0046906: tetrapyrrole binding | 1.98E-04 |
19 | GO:0004824: lysine-tRNA ligase activity | 1.98E-04 |
20 | GO:0051996: squalene synthase activity | 1.98E-04 |
21 | GO:0016783: sulfurtransferase activity | 1.98E-04 |
22 | GO:0004328: formamidase activity | 1.98E-04 |
23 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.98E-04 |
24 | GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity | 1.98E-04 |
25 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.98E-04 |
26 | GO:0071949: FAD binding | 2.45E-04 |
27 | GO:0008236: serine-type peptidase activity | 3.83E-04 |
28 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 4.43E-04 |
29 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 4.43E-04 |
30 | GO:0033201: alpha-1,4-glucan synthase activity | 4.43E-04 |
31 | GO:0050347: trans-octaprenyltranstransferase activity | 4.43E-04 |
32 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 4.43E-04 |
33 | GO:0009973: adenylyl-sulfate reductase activity | 4.43E-04 |
34 | GO:0004046: aminoacylase activity | 4.43E-04 |
35 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 4.43E-04 |
36 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 4.43E-04 |
37 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.43E-04 |
38 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 7.22E-04 |
39 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 7.22E-04 |
40 | GO:0004373: glycogen (starch) synthase activity | 7.22E-04 |
41 | GO:0032947: protein complex scaffold | 7.22E-04 |
42 | GO:0004557: alpha-galactosidase activity | 7.22E-04 |
43 | GO:0003861: 3-isopropylmalate dehydratase activity | 7.22E-04 |
44 | GO:0003935: GTP cyclohydrolase II activity | 7.22E-04 |
45 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 7.22E-04 |
46 | GO:0004096: catalase activity | 7.22E-04 |
47 | GO:0042802: identical protein binding | 8.42E-04 |
48 | GO:0004176: ATP-dependent peptidase activity | 9.64E-04 |
49 | GO:0000254: C-4 methylsterol oxidase activity | 1.03E-03 |
50 | GO:0004416: hydroxyacylglutathione hydrolase activity | 1.03E-03 |
51 | GO:0004792: thiosulfate sulfurtransferase activity | 1.03E-03 |
52 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.03E-03 |
53 | GO:0001053: plastid sigma factor activity | 1.37E-03 |
54 | GO:0016987: sigma factor activity | 1.37E-03 |
55 | GO:0009011: starch synthase activity | 1.37E-03 |
56 | GO:0004623: phospholipase A2 activity | 1.74E-03 |
57 | GO:0030151: molybdenum ion binding | 1.74E-03 |
58 | GO:0048038: quinone binding | 1.92E-03 |
59 | GO:0004709: MAP kinase kinase kinase activity | 2.14E-03 |
60 | GO:0000293: ferric-chelate reductase activity | 2.14E-03 |
61 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 2.14E-03 |
62 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.18E-03 |
63 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.36E-03 |
64 | GO:0008237: metallopeptidase activity | 2.46E-03 |
65 | GO:0016621: cinnamoyl-CoA reductase activity | 3.03E-03 |
66 | GO:0019899: enzyme binding | 3.03E-03 |
67 | GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity | 3.51E-03 |
68 | GO:0004222: metalloendopeptidase activity | 3.95E-03 |
69 | GO:0005375: copper ion transmembrane transporter activity | 4.02E-03 |
70 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 4.54E-03 |
71 | GO:0016844: strictosidine synthase activity | 5.10E-03 |
72 | GO:0005506: iron ion binding | 5.48E-03 |
73 | GO:0016887: ATPase activity | 5.50E-03 |
74 | GO:0000155: phosphorelay sensor kinase activity | 7.52E-03 |
75 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 7.52E-03 |
76 | GO:0031072: heat shock protein binding | 7.52E-03 |
77 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.19E-03 |
78 | GO:0051536: iron-sulfur cluster binding | 1.03E-02 |
79 | GO:0015035: protein disulfide oxidoreductase activity | 1.16E-02 |
80 | GO:0004812: aminoacyl-tRNA ligase activity | 1.50E-02 |
81 | GO:0047134: protein-disulfide reductase activity | 1.50E-02 |
82 | GO:0008080: N-acetyltransferase activity | 1.67E-02 |
83 | GO:0004791: thioredoxin-disulfide reductase activity | 1.76E-02 |
84 | GO:0010181: FMN binding | 1.76E-02 |
85 | GO:0050662: coenzyme binding | 1.76E-02 |
86 | GO:0004197: cysteine-type endopeptidase activity | 2.04E-02 |
87 | GO:0016791: phosphatase activity | 2.23E-02 |
88 | GO:0008483: transaminase activity | 2.33E-02 |
89 | GO:0016413: O-acetyltransferase activity | 2.42E-02 |
90 | GO:0004721: phosphoprotein phosphatase activity | 2.84E-02 |
91 | GO:0030247: polysaccharide binding | 2.84E-02 |
92 | GO:0016788: hydrolase activity, acting on ester bonds | 3.08E-02 |
93 | GO:0030145: manganese ion binding | 3.38E-02 |
94 | GO:0050897: cobalt ion binding | 3.38E-02 |
95 | GO:0004672: protein kinase activity | 3.45E-02 |
96 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.61E-02 |
97 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.84E-02 |
98 | GO:0061630: ubiquitin protein ligase activity | 3.93E-02 |
99 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.96E-02 |
100 | GO:0004185: serine-type carboxypeptidase activity | 4.32E-02 |
101 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.57E-02 |
102 | GO:0042803: protein homodimerization activity | 4.67E-02 |
103 | GO:0005198: structural molecule activity | 4.70E-02 |
104 | GO:0051287: NAD binding | 4.95E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009507: chloroplast | 4.42E-20 |
2 | GO:0009535: chloroplast thylakoid membrane | 1.80E-07 |
3 | GO:0031969: chloroplast membrane | 3.97E-05 |
4 | GO:0005777: peroxisome | 1.01E-04 |
5 | GO:0009570: chloroplast stroma | 1.68E-04 |
6 | GO:0031972: chloroplast intermembrane space | 1.98E-04 |
7 | GO:0080085: signal recognition particle, chloroplast targeting | 4.43E-04 |
8 | GO:0010007: magnesium chelatase complex | 7.22E-04 |
9 | GO:0016605: PML body | 7.22E-04 |
10 | GO:0005773: vacuole | 7.85E-04 |
11 | GO:0042651: thylakoid membrane | 8.81E-04 |
12 | GO:0009532: plastid stroma | 9.64E-04 |
13 | GO:0031372: UBC13-MMS2 complex | 1.37E-03 |
14 | GO:0009526: plastid envelope | 1.37E-03 |
15 | GO:0010287: plastoglobule | 2.13E-03 |
16 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.57E-03 |
17 | GO:0009501: amyloplast | 3.51E-03 |
18 | GO:0031982: vesicle | 3.51E-03 |
19 | GO:0009514: glyoxysome | 4.02E-03 |
20 | GO:0005779: integral component of peroxisomal membrane | 4.02E-03 |
21 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 4.02E-03 |
22 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.54E-03 |
23 | GO:0016604: nuclear body | 5.10E-03 |
24 | GO:0005884: actin filament | 6.27E-03 |
25 | GO:0009536: plastid | 8.04E-03 |
26 | GO:0005764: lysosome | 8.19E-03 |
27 | GO:0009706: chloroplast inner membrane | 1.12E-02 |
28 | GO:0005623: cell | 1.45E-02 |
29 | GO:0010319: stromule | 2.33E-02 |
30 | GO:0005778: peroxisomal membrane | 2.33E-02 |
31 | GO:0009941: chloroplast envelope | 3.12E-02 |
32 | GO:0005739: mitochondrion | 3.18E-02 |
33 | GO:0009534: chloroplast thylakoid | 3.36E-02 |
34 | GO:0031977: thylakoid lumen | 4.08E-02 |