Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G26380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
2GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
3GO:0046294: formaldehyde catabolic process0.00E+00
4GO:0010477: response to sulfur dioxide0.00E+00
5GO:0009661: chromoplast organization0.00E+00
6GO:0018293: protein-FAD linkage0.00E+00
7GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
8GO:0032780: negative regulation of ATPase activity0.00E+00
9GO:0009902: chloroplast relocation2.05E-07
10GO:0016120: carotene biosynthetic process4.66E-07
11GO:0006508: proteolysis1.72E-05
12GO:0055114: oxidation-reduction process7.75E-05
13GO:0009903: chloroplast avoidance movement1.19E-04
14GO:0016117: carotenoid biosynthetic process1.36E-04
15GO:0006102: isocitrate metabolic process2.00E-04
16GO:0051603: proteolysis involved in cellular protein catabolic process2.01E-04
17GO:0010362: negative regulation of anion channel activity by blue light2.27E-04
18GO:0010036: response to boron-containing substance2.27E-04
19GO:1902265: abscisic acid homeostasis2.27E-04
20GO:0071461: cellular response to redox state2.27E-04
21GO:0006430: lysyl-tRNA aminoacylation2.27E-04
22GO:0080065: 4-alpha-methyl-delta7-sterol oxidation2.27E-04
23GO:0006835: dicarboxylic acid transport2.27E-04
24GO:0051453: regulation of intracellular pH3.56E-04
25GO:0042128: nitrate assimilation4.32E-04
26GO:0080005: photosystem stoichiometry adjustment5.05E-04
27GO:0019388: galactose catabolic process5.05E-04
28GO:2000030: regulation of response to red or far red light5.05E-04
29GO:1902000: homogentisate catabolic process5.05E-04
30GO:0006898: receptor-mediated endocytosis5.05E-04
31GO:0007154: cell communication5.05E-04
32GO:1904143: positive regulation of carotenoid biosynthetic process5.05E-04
33GO:0080183: response to photooxidative stress5.05E-04
34GO:0009257: 10-formyltetrahydrofolate biosynthetic process5.05E-04
35GO:0043100: pyrimidine nucleobase salvage5.05E-04
36GO:0010343: singlet oxygen-mediated programmed cell death5.05E-04
37GO:0006099: tricarboxylic acid cycle7.52E-04
38GO:0031022: nuclear migration along microfilament8.21E-04
39GO:0019419: sulfate reduction8.21E-04
40GO:0044210: 'de novo' CTP biosynthetic process8.21E-04
41GO:0006013: mannose metabolic process8.21E-04
42GO:1901562: response to paraquat8.21E-04
43GO:0071836: nectar secretion8.21E-04
44GO:0006696: ergosterol biosynthetic process8.21E-04
45GO:0044375: regulation of peroxisome size8.21E-04
46GO:0009072: aromatic amino acid family metabolic process8.21E-04
47GO:0009113: purine nucleobase biosynthetic process1.17E-03
48GO:0009399: nitrogen fixation1.17E-03
49GO:0010148: transpiration1.17E-03
50GO:0009590: detection of gravity1.17E-03
51GO:2001141: regulation of RNA biosynthetic process1.17E-03
52GO:0006572: tyrosine catabolic process1.17E-03
53GO:0046713: borate transport1.17E-03
54GO:0016226: iron-sulfur cluster assembly1.27E-03
55GO:0009658: chloroplast organization1.53E-03
56GO:0071585: detoxification of cadmium ion1.56E-03
57GO:0015994: chlorophyll metabolic process1.56E-03
58GO:0071483: cellular response to blue light1.56E-03
59GO:0034613: cellular protein localization1.56E-03
60GO:0010021: amylopectin biosynthetic process1.56E-03
61GO:0006542: glutamine biosynthetic process1.56E-03
62GO:0070534: protein K63-linked ubiquitination1.56E-03
63GO:0015743: malate transport1.56E-03
64GO:0042391: regulation of membrane potential1.76E-03
65GO:0006520: cellular amino acid metabolic process1.89E-03
66GO:0000304: response to singlet oxygen1.99E-03
67GO:0009904: chloroplast accumulation movement1.99E-03
68GO:0010236: plastoquinone biosynthetic process1.99E-03
69GO:0019252: starch biosynthetic process2.18E-03
70GO:0010190: cytochrome b6f complex assembly2.45E-03
71GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.45E-03
72GO:0006301: postreplication repair2.45E-03
73GO:0010304: PSII associated light-harvesting complex II catabolic process2.45E-03
74GO:0006555: methionine metabolic process2.45E-03
75GO:0019509: L-methionine salvage from methylthioadenosine2.94E-03
76GO:1901001: negative regulation of response to salt stress2.94E-03
77GO:0010189: vitamin E biosynthetic process2.94E-03
78GO:0009058: biosynthetic process3.14E-03
79GO:0009396: folic acid-containing compound biosynthetic process3.47E-03
80GO:0050790: regulation of catalytic activity3.47E-03
81GO:0006955: immune response3.47E-03
82GO:0030091: protein repair4.02E-03
83GO:0005978: glycogen biosynthetic process4.02E-03
84GO:0009787: regulation of abscisic acid-activated signaling pathway4.02E-03
85GO:0050821: protein stabilization4.02E-03
86GO:0009231: riboflavin biosynthetic process4.02E-03
87GO:0016559: peroxisome fission4.02E-03
88GO:0048564: photosystem I assembly4.02E-03
89GO:0018298: protein-chromophore linkage4.38E-03
90GO:0015996: chlorophyll catabolic process4.60E-03
91GO:0071482: cellular response to light stimulus4.60E-03
92GO:0007568: aging5.06E-03
93GO:0009821: alkaloid biosynthetic process5.22E-03
94GO:0034765: regulation of ion transmembrane transport5.22E-03
95GO:0009637: response to blue light5.54E-03
96GO:0046686: response to cadmium ion5.55E-03
97GO:0009638: phototropism5.85E-03
98GO:0035999: tetrahydrofolate interconversion5.85E-03
99GO:0009098: leucine biosynthetic process5.85E-03
100GO:0000103: sulfate assimilation6.51E-03
101GO:0045036: protein targeting to chloroplast6.51E-03
102GO:0009773: photosynthetic electron transport in photosystem I7.20E-03
103GO:0006879: cellular iron ion homeostasis7.20E-03
104GO:0006352: DNA-templated transcription, initiation7.20E-03
105GO:0016485: protein processing7.20E-03
106GO:0048229: gametophyte development7.20E-03
107GO:0006790: sulfur compound metabolic process7.92E-03
108GO:0030048: actin filament-based movement8.66E-03
109GO:0006006: glucose metabolic process8.66E-03
110GO:0050826: response to freezing8.66E-03
111GO:0009718: anthocyanin-containing compound biosynthetic process8.66E-03
112GO:0009767: photosynthetic electron transport chain8.66E-03
113GO:0005986: sucrose biosynthetic process8.66E-03
114GO:0010207: photosystem II assembly9.42E-03
115GO:0007015: actin filament organization9.42E-03
116GO:0035556: intracellular signal transduction9.95E-03
117GO:0007031: peroxisome organization1.02E-02
118GO:0051017: actin filament bundle assembly1.19E-02
119GO:0019344: cysteine biosynthetic process1.19E-02
120GO:0008299: isoprenoid biosynthetic process1.27E-02
121GO:0006418: tRNA aminoacylation for protein translation1.27E-02
122GO:0045454: cell redox homeostasis1.28E-02
123GO:0006366: transcription from RNA polymerase II promoter1.36E-02
124GO:0003333: amino acid transmembrane transport1.36E-02
125GO:0009693: ethylene biosynthetic process1.54E-02
126GO:0006012: galactose metabolic process1.54E-02
127GO:0006817: phosphate ion transport1.64E-02
128GO:0042335: cuticle development1.83E-02
129GO:0080022: primary root development1.83E-02
130GO:0010118: stomatal movement1.83E-02
131GO:0006662: glycerol ether metabolic process1.93E-02
132GO:0010182: sugar mediated signaling pathway1.93E-02
133GO:0009741: response to brassinosteroid1.93E-02
134GO:0006814: sodium ion transport2.03E-02
135GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.24E-02
136GO:0019761: glucosinolate biosynthetic process2.35E-02
137GO:0007623: circadian rhythm2.38E-02
138GO:0030163: protein catabolic process2.46E-02
139GO:1901657: glycosyl compound metabolic process2.46E-02
140GO:0006464: cellular protein modification process2.57E-02
141GO:0071805: potassium ion transmembrane transport2.68E-02
142GO:0016126: sterol biosynthetic process2.91E-02
143GO:0010029: regulation of seed germination3.03E-02
144GO:0015995: chlorophyll biosynthetic process3.27E-02
145GO:0010411: xyloglucan metabolic process3.27E-02
146GO:0006950: response to stress3.27E-02
147GO:0016311: dephosphorylation3.40E-02
148GO:0048481: plant ovule development3.52E-02
149GO:0008219: cell death3.52E-02
150GO:0000160: phosphorelay signal transduction system3.65E-02
151GO:0009407: toxin catabolic process3.77E-02
152GO:0006811: ion transport3.77E-02
153GO:0010043: response to zinc ion3.90E-02
154GO:0006970: response to osmotic stress3.96E-02
155GO:0034599: cellular response to oxidative stress4.30E-02
156GO:0006457: protein folding4.68E-02
157GO:0005975: carbohydrate metabolic process4.82E-02
158GO:0046777: protein autophosphorylation4.86E-02
RankGO TermAdjusted P value
1GO:0047504: (-)-menthol dehydrogenase activity0.00E+00
2GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
3GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity0.00E+00
4GO:0050486: intramolecular transferase activity, transferring hydroxy groups0.00E+00
5GO:0018738: S-formylglutathione hydrolase activity0.00E+00
6GO:0015205: nucleobase transmembrane transporter activity0.00E+00
7GO:0004334: fumarylacetoacetase activity0.00E+00
8GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
9GO:0017153: sodium:dicarboxylate symporter activity0.00E+00
10GO:0046905: phytoene synthase activity0.00E+00
11GO:0008482: sulfite oxidase activity0.00E+00
12GO:0047501: (+)-neomenthol dehydrogenase activity0.00E+00
13GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
14GO:0042030: ATPase inhibitor activity0.00E+00
15GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
16GO:0050342: tocopherol O-methyltransferase activity0.00E+00
17GO:0016719: carotene 7,8-desaturase activity0.00E+00
18GO:0045436: lycopene beta cyclase activity0.00E+00
19GO:0004450: isocitrate dehydrogenase (NADP+) activity2.41E-06
20GO:0004180: carboxypeptidase activity8.79E-06
21GO:0008106: alcohol dehydrogenase (NADP+) activity2.00E-05
22GO:0016491: oxidoreductase activity7.92E-05
23GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity8.60E-05
24GO:0004824: lysine-tRNA ligase activity2.27E-04
25GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity2.27E-04
26GO:0008802: betaine-aldehyde dehydrogenase activity2.27E-04
27GO:0080139: borate efflux transmembrane transporter activity2.27E-04
28GO:0016783: sulfurtransferase activity2.27E-04
29GO:0051996: squalene synthase activity2.27E-04
30GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity2.27E-04
31GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity2.27E-04
32GO:0016784: 3-mercaptopyruvate sulfurtransferase activity2.27E-04
33GO:0046480: galactolipid galactosyltransferase activity2.27E-04
34GO:0080079: cellobiose glucosidase activity2.27E-04
35GO:0008236: serine-type peptidase activity4.95E-04
36GO:0050347: trans-octaprenyltranstransferase activity5.05E-04
37GO:0004477: methenyltetrahydrofolate cyclohydrolase activity5.05E-04
38GO:0009973: adenylyl-sulfate reductase activity5.05E-04
39GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity5.05E-04
40GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity5.05E-04
41GO:0004614: phosphoglucomutase activity5.05E-04
42GO:0004329: formate-tetrahydrofolate ligase activity5.05E-04
43GO:0004046: aminoacylase activity5.05E-04
44GO:0004310: farnesyl-diphosphate farnesyltransferase activity5.05E-04
45GO:0008967: phosphoglycolate phosphatase activity5.05E-04
46GO:0016868: intramolecular transferase activity, phosphotransferases5.05E-04
47GO:0043425: bHLH transcription factor binding5.05E-04
48GO:0033741: adenylyl-sulfate reductase (glutathione) activity5.05E-04
49GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity5.05E-04
50GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity5.05E-04
51GO:0033201: alpha-1,4-glucan synthase activity5.05E-04
52GO:0010277: chlorophyllide a oxygenase [overall] activity8.21E-04
53GO:0046524: sucrose-phosphate synthase activity8.21E-04
54GO:0004373: glycogen (starch) synthase activity8.21E-04
55GO:0003913: DNA photolyase activity8.21E-04
56GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.21E-04
57GO:0032947: protein complex scaffold8.21E-04
58GO:0003861: 3-isopropylmalate dehydratase activity8.21E-04
59GO:0003935: GTP cyclohydrolase II activity8.21E-04
60GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity8.21E-04
61GO:0000254: C-4 methylsterol oxidase activity1.17E-03
62GO:0004792: thiosulfate sulfurtransferase activity1.17E-03
63GO:0003883: CTP synthase activity1.17E-03
64GO:0004176: ATP-dependent peptidase activity1.17E-03
65GO:0046715: borate transmembrane transporter activity1.17E-03
66GO:0009882: blue light photoreceptor activity1.17E-03
67GO:0016987: sigma factor activity1.56E-03
68GO:0009011: starch synthase activity1.56E-03
69GO:0001053: plastid sigma factor activity1.56E-03
70GO:0030551: cyclic nucleotide binding1.76E-03
71GO:0005249: voltage-gated potassium channel activity1.76E-03
72GO:0008177: succinate dehydrogenase (ubiquinone) activity1.99E-03
73GO:0005452: inorganic anion exchanger activity1.99E-03
74GO:0004356: glutamate-ammonia ligase activity1.99E-03
75GO:0030151: molybdenum ion binding1.99E-03
76GO:0015301: anion:anion antiporter activity1.99E-03
77GO:0010181: FMN binding2.03E-03
78GO:0048038: quinone binding2.33E-03
79GO:0004709: MAP kinase kinase kinase activity2.45E-03
80GO:0004029: aldehyde dehydrogenase (NAD) activity2.45E-03
81GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity2.45E-03
82GO:0000293: ferric-chelate reductase activity2.45E-03
83GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.45E-03
84GO:0004197: cysteine-type endopeptidase activity2.49E-03
85GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.65E-03
86GO:0016791: phosphatase activity2.82E-03
87GO:0005261: cation channel activity2.94E-03
88GO:0004559: alpha-mannosidase activity2.94E-03
89GO:0016157: sucrose synthase activity2.94E-03
90GO:0005242: inward rectifier potassium channel activity2.94E-03
91GO:0008237: metallopeptidase activity2.99E-03
92GO:0016621: cinnamoyl-CoA reductase activity3.47E-03
93GO:0009881: photoreceptor activity3.47E-03
94GO:0015140: malate transmembrane transporter activity3.47E-03
95GO:0004034: aldose 1-epimerase activity4.02E-03
96GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity4.02E-03
97GO:0004222: metalloendopeptidase activity4.82E-03
98GO:0071949: FAD binding5.22E-03
99GO:0015174: basic amino acid transmembrane transporter activity5.85E-03
100GO:0016844: strictosidine synthase activity5.85E-03
101GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.85E-03
102GO:0042802: identical protein binding6.00E-03
103GO:0004185: serine-type carboxypeptidase activity7.14E-03
104GO:0016887: ATPase activity7.46E-03
105GO:0000287: magnesium ion binding7.53E-03
106GO:0016788: hydrolase activity, acting on ester bonds7.90E-03
107GO:0008378: galactosyltransferase activity7.92E-03
108GO:0015293: symporter activity8.03E-03
109GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.66E-03
110GO:0005315: inorganic phosphate transmembrane transporter activity8.66E-03
111GO:0031072: heat shock protein binding8.66E-03
112GO:0000155: phosphorelay sensor kinase activity8.66E-03
113GO:0051287: NAD binding8.66E-03
114GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.42E-03
115GO:0030552: cAMP binding1.02E-02
116GO:0030553: cGMP binding1.02E-02
117GO:0008234: cysteine-type peptidase activity1.07E-02
118GO:0001046: core promoter sequence-specific DNA binding1.19E-02
119GO:0051536: iron-sulfur cluster binding1.19E-02
120GO:0005216: ion channel activity1.27E-02
121GO:0051082: unfolded protein binding1.38E-02
122GO:0015035: protein disulfide oxidoreductase activity1.42E-02
123GO:0047134: protein-disulfide reductase activity1.73E-02
124GO:0004812: aminoacyl-tRNA ligase activity1.73E-02
125GO:0030170: pyridoxal phosphate binding1.92E-02
126GO:0008080: N-acetyltransferase activity1.93E-02
127GO:0050662: coenzyme binding2.03E-02
128GO:0004791: thioredoxin-disulfide reductase activity2.03E-02
129GO:0016853: isomerase activity2.03E-02
130GO:0004518: nuclease activity2.35E-02
131GO:0008483: transaminase activity2.68E-02
132GO:0016413: O-acetyltransferase activity2.80E-02
133GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.03E-02
134GO:0004721: phosphoprotein phosphatase activity3.27E-02
135GO:0030247: polysaccharide binding3.27E-02
136GO:0030145: manganese ion binding3.90E-02
137GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.90E-02
138GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.17E-02
139GO:0008422: beta-glucosidase activity4.43E-02
140GO:0004712: protein serine/threonine/tyrosine kinase activity4.43E-02
141GO:0008233: peptidase activity4.48E-02
142GO:0051539: 4 iron, 4 sulfur cluster binding4.57E-02
143GO:0004672: protein kinase activity4.60E-02
144GO:0061630: ubiquitin protein ligase activity4.79E-02
145GO:0004364: glutathione transferase activity4.85E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast4.27E-16
2GO:0005773: vacuole2.03E-06
3GO:0031969: chloroplast membrane6.93E-06
4GO:0005777: peroxisome1.71E-04
5GO:0009501: amyloplast2.00E-04
6GO:0043674: columella2.27E-04
7GO:0009536: plastid2.83E-04
8GO:0009941: chloroplast envelope3.45E-04
9GO:0009570: chloroplast stroma3.48E-04
10GO:0009535: chloroplast thylakoid membrane3.92E-04
11GO:0005764: lysosome7.06E-04
12GO:0009509: chromoplast8.21E-04
13GO:0016328: lateral plasma membrane8.21E-04
14GO:0009532: plastid stroma1.17E-03
15GO:0009526: plastid envelope1.56E-03
16GO:0031372: UBC13-MMS2 complex1.56E-03
17GO:0009706: chloroplast inner membrane2.21E-03
18GO:0009840: chloroplastic endopeptidase Clp complex2.94E-03
19GO:0010319: stromule2.99E-03
20GO:0031359: integral component of chloroplast outer membrane3.47E-03
21GO:0031982: vesicle4.02E-03
22GO:0005779: integral component of peroxisomal membrane4.60E-03
23GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.22E-03
24GO:0005884: actin filament7.20E-03
25GO:0005739: mitochondrion7.73E-03
26GO:0042651: thylakoid membrane1.27E-02
27GO:0010287: plastoglobule1.63E-02
28GO:0005623: cell1.77E-02
29GO:0005759: mitochondrial matrix2.17E-02
30GO:0005887: integral component of plasma membrane2.45E-02
31GO:0005774: vacuolar membrane2.58E-02
32GO:0005615: extracellular space2.67E-02
33GO:0005778: peroxisomal membrane2.68E-02
34GO:0016021: integral component of membrane3.49E-02
35GO:0009707: chloroplast outer membrane3.52E-02
36GO:0009505: plant-type cell wall3.67E-02
37GO:0005829: cytosol4.03E-02
38GO:0009534: chloroplast thylakoid4.31E-02
39GO:0031977: thylakoid lumen4.71E-02
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Gene type



Gene DE type