co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26085

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900088: regulation of inositol biosynthetic process	0.00E+00
2	GO:1900091: regulation of raffinose biosynthetic process	0.00E+00
3	GO:0009661: chromoplast organization	0.00E+00
4	GO:0009150: purine ribonucleotide metabolic process	4.30E-07
5	GO:0010190: cytochrome b6f complex assembly	5.34E-06
6	GO:0009117: nucleotide metabolic process	5.34E-06
7	GO:0006285: base-excision repair, AP site formation	4.18E-05
8	GO:0071461: cellular response to redox state	4.18E-05
9	GO:0032956: regulation of actin cytoskeleton organization	4.18E-05
10	GO:0006790: sulfur compound metabolic process	4.90E-05
11	GO:0080005: photosystem stoichiometry adjustment	1.04E-04
12	GO:0048571: long-day photoperiodism	1.04E-04
13	GO:1904143: positive regulation of carotenoid biosynthetic process	1.04E-04
14	GO:0010343: singlet oxygen-mediated programmed cell death	1.04E-04
15	GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion	1.78E-04
16	GO:0006013: mannose metabolic process	1.78E-04
17	GO:0008652: cellular amino acid biosynthetic process	1.78E-04
18	GO:0044210: 'de novo' CTP biosynthetic process	1.78E-04
19	GO:0031929: TOR signaling	1.78E-04
20	GO:0050482: arachidonic acid secretion	2.63E-04
21	GO:2001141: regulation of RNA biosynthetic process	2.63E-04
22	GO:0009067: aspartate family amino acid biosynthetic process	2.63E-04
23	GO:0016120: carotene biosynthetic process	4.50E-04
24	GO:0000304: response to singlet oxygen	4.50E-04
25	GO:0050821: protein stabilization	8.84E-04
26	GO:0006102: isocitrate metabolic process	8.84E-04
27	GO:0006644: phospholipid metabolic process	8.84E-04
28	GO:0019430: removal of superoxide radicals	1.00E-03
29	GO:0071482: cellular response to light stimulus	1.00E-03
30	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.13E-03
31	GO:0006535: cysteine biosynthetic process from serine	1.39E-03
32	GO:0000103: sulfate assimilation	1.39E-03
33	GO:0006352: DNA-templated transcription, initiation	1.53E-03
34	GO:0019344: cysteine biosynthetic process	2.46E-03
35	GO:0006366: transcription from RNA polymerase II promoter	2.80E-03
36	GO:0006284: base-excision repair	3.33E-03
37	GO:0042335: cuticle development	3.71E-03
38	GO:0006662: glycerol ether metabolic process	3.91E-03
39	GO:0030163: protein catabolic process	4.93E-03
40	GO:0010043: response to zinc ion	7.72E-03
41	GO:0034599: cellular response to oxidative stress	8.48E-03
42	GO:0006099: tricarboxylic acid cycle	8.48E-03
43	GO:0042546: cell wall biogenesis	1.01E-02
44	GO:0006457: protein folding	1.56E-02
45	GO:0006508: proteolysis	1.89E-02
46	GO:0009058: biosynthetic process	1.89E-02
47	GO:0009739: response to gibberellin	2.48E-02
48	GO:0009723: response to ethylene	3.47E-02
49	GO:0010200: response to chitin	3.74E-02
50	GO:0045454: cell redox homeostasis	4.15E-02
51	GO:0009751: response to salicylic acid	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0043530: adenosine 5'-monophosphoramidase activity	0.00E+00
2	GO:0004780: sulfate adenylyltransferase (ADP) activity	0.00E+00
3	GO:0047710: bis(5'-adenosyl)-triphosphatase activity	0.00E+00
4	GO:0047627: adenylylsulfatase activity	1.04E-09
5	GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	4.18E-05
6	GO:0004412: homoserine dehydrogenase activity	1.04E-04
7	GO:0004450: isocitrate dehydrogenase (NADP+) activity	1.04E-04
8	GO:0004180: carboxypeptidase activity	1.78E-04
9	GO:0003883: CTP synthase activity	2.63E-04
10	GO:0009001: serine O-acetyltransferase activity	2.63E-04
11	GO:0016987: sigma factor activity	3.53E-04
12	GO:0001053: plastid sigma factor activity	3.53E-04
13	GO:0019104: DNA N-glycosylase activity	3.53E-04
14	GO:0016407: acetyltransferase activity	4.50E-04
15	GO:0004623: phospholipase A2 activity	4.50E-04
16	GO:0004784: superoxide dismutase activity	5.51E-04
17	GO:0004559: alpha-mannosidase activity	6.58E-04
18	GO:0071949: FAD binding	1.13E-03
19	GO:0001046: core promoter sequence-specific DNA binding	2.46E-03
20	GO:0047134: protein-disulfide reductase activity	3.52E-03
21	GO:0008080: N-acetyltransferase activity	3.91E-03
22	GO:0008536: Ran GTPase binding	3.91E-03
23	GO:0004791: thioredoxin-disulfide reductase activity	4.11E-03
24	GO:0008233: peptidase activity	4.53E-03
25	GO:0004518: nuclease activity	4.72E-03
26	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.93E-03
27	GO:0008236: serine-type peptidase activity	6.74E-03
28	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	7.72E-03
29	GO:0051287: NAD binding	1.12E-02
30	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.21E-02
31	GO:0000166: nucleotide binding	1.21E-02
32	GO:0051082: unfolded protein binding	1.55E-02
33	GO:0015035: protein disulfide oxidoreductase activity	1.59E-02
34	GO:0000287: magnesium ion binding	3.09E-02
35	GO:0016491: oxidoreductase activity	3.23E-02
36	GO:0003682: chromatin binding	3.26E-02
37	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.15E-02
38	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.47E-02
39	GO:0003924: GTPase activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0031932: TORC2 complex	4.18E-05
2	GO:0031931: TORC1 complex	1.78E-04
3	GO:0031969: chloroplast membrane	5.66E-04
4	GO:0042644: chloroplast nucleoid	1.13E-03
5	GO:0009507: chloroplast	1.75E-03
6	GO:0005759: mitochondrial matrix	2.21E-03
7	GO:0005777: peroxisome	2.22E-03
8	GO:0042651: thylakoid membrane	2.62E-03
9	GO:0031977: thylakoid lumen	9.28E-03
10	GO:0009706: chloroplast inner membrane	1.55E-02
11	GO:0005768: endosome	2.20E-02
12	GO:0005840: ribosome	2.57E-02
13	GO:0009536: plastid	3.01E-02
14	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.34E-02