Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G26080

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000505: regulation of energy homeostasis0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
4GO:0042821: pyridoxal biosynthetic process0.00E+00
5GO:0015882: L-ascorbic acid transport0.00E+00
6GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
7GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
8GO:0006114: glycerol biosynthetic process0.00E+00
9GO:0042820: vitamin B6 catabolic process0.00E+00
10GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
11GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
12GO:0015979: photosynthesis1.62E-08
13GO:0018298: protein-chromophore linkage9.36E-07
14GO:0009768: photosynthesis, light harvesting in photosystem I1.07E-06
15GO:0009642: response to light intensity2.34E-06
16GO:0090391: granum assembly5.99E-06
17GO:0009773: photosynthetic electron transport in photosystem I1.13E-05
18GO:0010027: thylakoid membrane organization1.45E-05
19GO:0010207: photosystem II assembly2.20E-05
20GO:0009765: photosynthesis, light harvesting2.56E-05
21GO:0006021: inositol biosynthetic process2.56E-05
22GO:0046855: inositol phosphate dephosphorylation6.12E-05
23GO:0042549: photosystem II stabilization6.12E-05
24GO:0010196: nonphotochemical quenching1.13E-04
25GO:0009645: response to low light intensity stimulus1.13E-04
26GO:0048564: photosystem I assembly1.45E-04
27GO:0000476: maturation of 4.5S rRNA1.84E-04
28GO:0009443: pyridoxal 5'-phosphate salvage1.84E-04
29GO:0018002: N-terminal peptidyl-glutamic acid acetylation1.84E-04
30GO:0000967: rRNA 5'-end processing1.84E-04
31GO:0071277: cellular response to calcium ion1.84E-04
32GO:1904966: positive regulation of vitamin E biosynthetic process1.84E-04
33GO:0006475: internal protein amino acid acetylation1.84E-04
34GO:0000481: maturation of 5S rRNA1.84E-04
35GO:1904964: positive regulation of phytol biosynthetic process1.84E-04
36GO:0006474: N-terminal protein amino acid acetylation1.84E-04
37GO:0017198: N-terminal peptidyl-serine acetylation1.84E-04
38GO:0042371: vitamin K biosynthetic process1.84E-04
39GO:0043686: co-translational protein modification1.84E-04
40GO:0043007: maintenance of rDNA1.84E-04
41GO:0010028: xanthophyll cycle1.84E-04
42GO:0034337: RNA folding1.84E-04
43GO:0010206: photosystem II repair2.21E-04
44GO:0016311: dephosphorylation3.37E-04
45GO:0019684: photosynthesis, light reaction3.60E-04
46GO:0043085: positive regulation of catalytic activity3.60E-04
47GO:0010218: response to far red light4.09E-04
48GO:0006790: sulfur compound metabolic process4.14E-04
49GO:0080181: lateral root branching4.15E-04
50GO:0034470: ncRNA processing4.15E-04
51GO:0042853: L-alanine catabolic process4.15E-04
52GO:1902326: positive regulation of chlorophyll biosynthetic process4.15E-04
53GO:0035304: regulation of protein dephosphorylation4.15E-04
54GO:0030187: melatonin biosynthetic process4.15E-04
55GO:0006432: phenylalanyl-tRNA aminoacylation4.15E-04
56GO:0018026: peptidyl-lysine monomethylation4.15E-04
57GO:0000256: allantoin catabolic process4.15E-04
58GO:0097054: L-glutamate biosynthetic process4.15E-04
59GO:0006729: tetrahydrobiopterin biosynthetic process4.15E-04
60GO:0030388: fructose 1,6-bisphosphate metabolic process4.15E-04
61GO:0006094: gluconeogenesis4.70E-04
62GO:0009853: photorespiration4.90E-04
63GO:0009637: response to blue light4.90E-04
64GO:0034599: cellular response to oxidative stress5.18E-04
65GO:0019253: reductive pentose-phosphate cycle5.30E-04
66GO:0046854: phosphatidylinositol phosphorylation5.92E-04
67GO:0010114: response to red light6.75E-04
68GO:0006000: fructose metabolic process6.76E-04
69GO:0009405: pathogenesis6.76E-04
70GO:0010136: ureide catabolic process6.76E-04
71GO:0005977: glycogen metabolic process6.76E-04
72GO:0006145: purine nucleobase catabolic process9.65E-04
73GO:0006537: glutamate biosynthetic process9.65E-04
74GO:0009052: pentose-phosphate shunt, non-oxidative branch9.65E-04
75GO:0046739: transport of virus in multicellular host9.65E-04
76GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly9.65E-04
77GO:0006020: inositol metabolic process9.65E-04
78GO:0009658: chloroplast organization9.74E-04
79GO:0006109: regulation of carbohydrate metabolic process1.28E-03
80GO:0015994: chlorophyll metabolic process1.28E-03
81GO:0010021: amylopectin biosynthetic process1.28E-03
82GO:0019676: ammonia assimilation cycle1.28E-03
83GO:0015976: carbon utilization1.28E-03
84GO:0006545: glycine biosynthetic process1.28E-03
85GO:0006662: glycerol ether metabolic process1.41E-03
86GO:0016558: protein import into peroxisome matrix1.63E-03
87GO:0010236: plastoquinone biosynthetic process1.63E-03
88GO:0019252: starch biosynthetic process1.63E-03
89GO:0031365: N-terminal protein amino acid modification1.63E-03
90GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.01E-03
91GO:0042793: transcription from plastid promoter2.01E-03
92GO:0050665: hydrogen peroxide biosynthetic process2.01E-03
93GO:0071470: cellular response to osmotic stress2.41E-03
94GO:0042372: phylloquinone biosynthetic process2.41E-03
95GO:0010189: vitamin E biosynthetic process2.41E-03
96GO:0009854: oxidative photosynthetic carbon pathway2.41E-03
97GO:0006413: translational initiation2.77E-03
98GO:0009772: photosynthetic electron transport in photosystem II2.83E-03
99GO:0009769: photosynthesis, light harvesting in photosystem II2.83E-03
100GO:0015995: chlorophyll biosynthetic process2.94E-03
101GO:0030091: protein repair3.28E-03
102GO:0009704: de-etiolation3.28E-03
103GO:0032508: DNA duplex unwinding3.28E-03
104GO:0016559: peroxisome fission3.28E-03
105GO:0055114: oxidation-reduction process3.42E-03
106GO:0006002: fructose 6-phosphate metabolic process3.75E-03
107GO:0009657: plastid organization3.75E-03
108GO:0017004: cytochrome complex assembly3.75E-03
109GO:0098656: anion transmembrane transport4.25E-03
110GO:0006098: pentose-phosphate shunt4.25E-03
111GO:0009821: alkaloid biosynthetic process4.25E-03
112GO:0090333: regulation of stomatal closure4.25E-03
113GO:0010205: photoinhibition4.76E-03
114GO:0009644: response to high light intensity5.73E-03
115GO:0009416: response to light stimulus5.81E-03
116GO:0009698: phenylpropanoid metabolic process5.85E-03
117GO:0009089: lysine biosynthetic process via diaminopimelate5.85E-03
118GO:0006415: translational termination5.85E-03
119GO:0005986: sucrose biosynthetic process7.03E-03
120GO:0006006: glucose metabolic process7.03E-03
121GO:0010020: chloroplast fission7.64E-03
122GO:0019853: L-ascorbic acid biosynthetic process8.27E-03
123GO:0006096: glycolytic process8.44E-03
124GO:0006833: water transport8.93E-03
125GO:0008299: isoprenoid biosynthetic process1.03E-02
126GO:0009269: response to desiccation1.10E-02
127GO:0006012: galactose metabolic process1.25E-02
128GO:0009561: megagametogenesis1.32E-02
129GO:0016117: carotenoid biosynthetic process1.40E-02
130GO:0034220: ion transmembrane transport1.48E-02
131GO:0009791: post-embryonic development1.73E-02
132GO:0008654: phospholipid biosynthetic process1.73E-02
133GO:0071554: cell wall organization or biogenesis1.81E-02
134GO:0006635: fatty acid beta-oxidation1.81E-02
135GO:0016032: viral process1.90E-02
136GO:0009735: response to cytokinin2.10E-02
137GO:0001666: response to hypoxia2.35E-02
138GO:0009627: systemic acquired resistance2.55E-02
139GO:0009409: response to cold2.64E-02
140GO:0009817: defense response to fungus, incompatible interaction2.84E-02
141GO:0006810: transport2.98E-02
142GO:0006811: ion transport3.05E-02
143GO:0005975: carbohydrate metabolic process3.13E-02
144GO:0007568: aging3.15E-02
145GO:0055085: transmembrane transport3.16E-02
146GO:0016051: carbohydrate biosynthetic process3.36E-02
147GO:0080167: response to karrikin3.39E-02
148GO:0009744: response to sucrose4.03E-02
149GO:0045454: cell redox homeostasis4.05E-02
150GO:0006855: drug transmembrane transport4.50E-02
151GO:0006364: rRNA processing4.98E-02
RankGO TermAdjusted P value
1GO:0004059: aralkylamine N-acetyltransferase activity0.00E+00
2GO:0043136: glycerol-3-phosphatase activity0.00E+00
3GO:0000121: glycerol-1-phosphatase activity0.00E+00
4GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
5GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
6GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
7GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
8GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
9GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
10GO:0004760: serine-pyruvate transaminase activity0.00E+00
11GO:0042623: ATPase activity, coupled0.00E+00
12GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
13GO:0010276: phytol kinase activity0.00E+00
14GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
15GO:0015229: L-ascorbic acid transporter activity0.00E+00
16GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
17GO:0050281: serine-glyoxylate transaminase activity0.00E+00
18GO:0016168: chlorophyll binding5.27E-07
19GO:0031409: pigment binding6.64E-07
20GO:0052832: inositol monophosphate 3-phosphatase activity1.62E-06
21GO:0008934: inositol monophosphate 1-phosphatase activity1.62E-06
22GO:0052833: inositol monophosphate 4-phosphatase activity1.62E-06
23GO:0070402: NADPH binding5.99E-06
24GO:0008453: alanine-glyoxylate transaminase activity2.56E-05
25GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity8.53E-05
26GO:1990189: peptide-serine-N-acetyltransferase activity1.84E-04
27GO:0047958: glycine:2-oxoglutarate aminotransferase activity1.84E-04
28GO:0010242: oxygen evolving activity1.84E-04
29GO:1990190: peptide-glutamate-N-acetyltransferase activity1.84E-04
30GO:0042586: peptide deformylase activity1.84E-04
31GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.84E-04
32GO:0016041: glutamate synthase (ferredoxin) activity1.84E-04
33GO:0010347: L-galactose-1-phosphate phosphatase activity1.84E-04
34GO:0016784: 3-mercaptopyruvate sulfurtransferase activity1.84E-04
35GO:0046872: metal ion binding2.61E-04
36GO:0008047: enzyme activator activity3.10E-04
37GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.15E-04
38GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity4.15E-04
39GO:0004826: phenylalanine-tRNA ligase activity4.15E-04
40GO:0019172: glyoxalase III activity4.15E-04
41GO:0019156: isoamylase activity4.15E-04
42GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity4.15E-04
43GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.15E-04
44GO:0047746: chlorophyllase activity4.15E-04
45GO:0031072: heat shock protein binding4.70E-04
46GO:0004751: ribose-5-phosphate isomerase activity6.76E-04
47GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor6.76E-04
48GO:0005528: FK506 binding7.29E-04
49GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.18E-04
50GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity9.65E-04
51GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity9.65E-04
52GO:0004792: thiosulfate sulfurtransferase activity9.65E-04
53GO:0016149: translation release factor activity, codon specific9.65E-04
54GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity9.65E-04
55GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity9.65E-04
56GO:0047134: protein-disulfide reductase activity1.22E-03
57GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.28E-03
58GO:0043495: protein anchor1.28E-03
59GO:0008891: glycolate oxidase activity1.28E-03
60GO:0004659: prenyltransferase activity1.28E-03
61GO:0016279: protein-lysine N-methyltransferase activity1.28E-03
62GO:0008080: N-acetyltransferase activity1.41E-03
63GO:0016853: isomerase activity1.52E-03
64GO:0004791: thioredoxin-disulfide reductase activity1.52E-03
65GO:0051538: 3 iron, 4 sulfur cluster binding1.63E-03
66GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.98E-03
67GO:0004332: fructose-bisphosphate aldolase activity2.01E-03
68GO:0000293: ferric-chelate reductase activity2.01E-03
69GO:0004556: alpha-amylase activity2.01E-03
70GO:0042578: phosphoric ester hydrolase activity2.01E-03
71GO:0004462: lactoylglutathione lyase activity2.01E-03
72GO:0004605: phosphatidate cytidylyltransferase activity2.01E-03
73GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.41E-03
74GO:0004017: adenylate kinase activity2.41E-03
75GO:0019899: enzyme binding2.83E-03
76GO:0004034: aldose 1-epimerase activity3.28E-03
77GO:0004033: aldo-keto reductase (NADP) activity3.28E-03
78GO:0008135: translation factor activity, RNA binding3.75E-03
79GO:0042802: identical protein binding4.10E-03
80GO:0003747: translation release factor activity4.25E-03
81GO:0003993: acid phosphatase activity4.30E-03
82GO:0016844: strictosidine synthase activity4.76E-03
83GO:0000049: tRNA binding6.43E-03
84GO:0008081: phosphoric diester hydrolase activity7.03E-03
85GO:0005315: inorganic phosphate transmembrane transporter activity7.03E-03
86GO:0004089: carbonate dehydratase activity7.03E-03
87GO:0008266: poly(U) RNA binding7.64E-03
88GO:0004857: enzyme inhibitor activity9.60E-03
89GO:0051082: unfolded protein binding1.02E-02
90GO:0015035: protein disulfide oxidoreductase activity1.05E-02
91GO:0003924: GTPase activity1.14E-02
92GO:0022891: substrate-specific transmembrane transporter activity1.25E-02
93GO:0008514: organic anion transmembrane transporter activity1.32E-02
94GO:0003756: protein disulfide isomerase activity1.32E-02
95GO:0005509: calcium ion binding1.49E-02
96GO:0010181: FMN binding1.64E-02
97GO:0016787: hydrolase activity1.77E-02
98GO:0048038: quinone binding1.81E-02
99GO:0003743: translation initiation factor activity2.06E-02
100GO:0016413: O-acetyltransferase activity2.26E-02
101GO:0015250: water channel activity2.35E-02
102GO:0016491: oxidoreductase activity2.54E-02
103GO:0015238: drug transmembrane transporter activity2.94E-02
104GO:0030145: manganese ion binding3.15E-02
105GO:0003746: translation elongation factor activity3.36E-02
106GO:0050661: NADP binding3.69E-02
107GO:0004185: serine-type carboxypeptidase activity4.03E-02
108GO:0005525: GTP binding4.35E-02
109GO:0005198: structural molecule activity4.38E-02
110GO:0051287: NAD binding4.61E-02
RankGO TermAdjusted P value
1GO:0010368: chloroplast isoamylase complex0.00E+00
2GO:0009515: granal stacked thylakoid0.00E+00
3GO:0009507: chloroplast2.45E-54
4GO:0009535: chloroplast thylakoid membrane2.09E-33
5GO:0009534: chloroplast thylakoid3.45E-31
6GO:0009570: chloroplast stroma1.21E-23
7GO:0009579: thylakoid1.01E-17
8GO:0009941: chloroplast envelope2.76E-15
9GO:0009543: chloroplast thylakoid lumen7.87E-14
10GO:0031977: thylakoid lumen5.66E-11
11GO:0010287: plastoglobule2.58E-09
12GO:0009654: photosystem II oxygen evolving complex1.07E-06
13GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)4.82E-06
14GO:0019898: extrinsic component of membrane5.66E-06
15GO:0030095: chloroplast photosystem II2.20E-05
16GO:0030076: light-harvesting complex2.67E-05
17GO:0009522: photosystem I1.23E-04
18GO:0009523: photosystem II1.36E-04
19GO:0009782: photosystem I antenna complex1.84E-04
20GO:0048046: apoplast1.89E-04
21GO:0000427: plastid-encoded plastid RNA polymerase complex4.15E-04
22GO:0031415: NatA complex4.15E-04
23GO:0009517: PSII associated light-harvesting complex II1.28E-03
24GO:0031969: chloroplast membrane1.34E-03
25GO:0009538: photosystem I reaction center3.28E-03
26GO:0032040: small-subunit processome6.43E-03
27GO:0009508: plastid chromosome7.03E-03
28GO:0005777: peroxisome7.16E-03
29GO:0009706: chloroplast inner membrane1.02E-02
30GO:0042651: thylakoid membrane1.03E-02
31GO:0016020: membrane1.07E-02
32GO:0005623: cell1.31E-02
33GO:0005759: mitochondrial matrix1.61E-02
34GO:0009295: nucleoid2.17E-02
35GO:0005778: peroxisomal membrane2.17E-02
36GO:0022626: cytosolic ribosome2.22E-02
37GO:0016021: integral component of membrane2.56E-02
38GO:0009707: chloroplast outer membrane2.84E-02
<
Gene type



Gene DE type