GO Enrichment Analysis of Co-expressed Genes with
AT3G25040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007530: sex determination | 0.00E+00 |
| 2 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 3 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 4 | GO:0006412: translation | 5.88E-31 |
| 5 | GO:0042254: ribosome biogenesis | 1.59E-11 |
| 6 | GO:0000027: ribosomal large subunit assembly | 5.38E-06 |
| 7 | GO:0000028: ribosomal small subunit assembly | 3.81E-05 |
| 8 | GO:2001006: regulation of cellulose biosynthetic process | 7.75E-05 |
| 9 | GO:0009735: response to cytokinin | 1.29E-04 |
| 10 | GO:0009793: embryo development ending in seed dormancy | 1.31E-04 |
| 11 | GO:0051788: response to misfolded protein | 1.85E-04 |
| 12 | GO:0045905: positive regulation of translational termination | 1.85E-04 |
| 13 | GO:0071668: plant-type cell wall assembly | 1.85E-04 |
| 14 | GO:0045901: positive regulation of translational elongation | 1.85E-04 |
| 15 | GO:0006452: translational frameshifting | 1.85E-04 |
| 16 | GO:0046168: glycerol-3-phosphate catabolic process | 3.11E-04 |
| 17 | GO:1902626: assembly of large subunit precursor of preribosome | 3.11E-04 |
| 18 | GO:0045793: positive regulation of cell size | 3.11E-04 |
| 19 | GO:0006165: nucleoside diphosphate phosphorylation | 4.49E-04 |
| 20 | GO:0006228: UTP biosynthetic process | 4.49E-04 |
| 21 | GO:0009647: skotomorphogenesis | 4.49E-04 |
| 22 | GO:0032877: positive regulation of DNA endoreduplication | 4.49E-04 |
| 23 | GO:0070301: cellular response to hydrogen peroxide | 4.49E-04 |
| 24 | GO:0006241: CTP biosynthetic process | 4.49E-04 |
| 25 | GO:0006072: glycerol-3-phosphate metabolic process | 4.49E-04 |
| 26 | GO:0051781: positive regulation of cell division | 5.98E-04 |
| 27 | GO:0042274: ribosomal small subunit biogenesis | 5.98E-04 |
| 28 | GO:0006183: GTP biosynthetic process | 5.98E-04 |
| 29 | GO:0043248: proteasome assembly | 9.24E-04 |
| 30 | GO:0009554: megasporogenesis | 1.10E-03 |
| 31 | GO:1901001: negative regulation of response to salt stress | 1.10E-03 |
| 32 | GO:0048528: post-embryonic root development | 1.29E-03 |
| 33 | GO:0050821: protein stabilization | 1.48E-03 |
| 34 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.48E-03 |
| 35 | GO:0006526: arginine biosynthetic process | 1.69E-03 |
| 36 | GO:0009808: lignin metabolic process | 1.69E-03 |
| 37 | GO:0048589: developmental growth | 1.91E-03 |
| 38 | GO:0098656: anion transmembrane transport | 1.91E-03 |
| 39 | GO:0010449: root meristem growth | 2.14E-03 |
| 40 | GO:0043069: negative regulation of programmed cell death | 2.37E-03 |
| 41 | GO:0048229: gametophyte development | 2.61E-03 |
| 42 | GO:0006820: anion transport | 2.86E-03 |
| 43 | GO:0010102: lateral root morphogenesis | 3.12E-03 |
| 44 | GO:0010628: positive regulation of gene expression | 3.12E-03 |
| 45 | GO:0006626: protein targeting to mitochondrion | 3.12E-03 |
| 46 | GO:0000398: mRNA splicing, via spliceosome | 3.60E-03 |
| 47 | GO:0006289: nucleotide-excision repair | 4.23E-03 |
| 48 | GO:0006487: protein N-linked glycosylation | 4.23E-03 |
| 49 | GO:0007005: mitochondrion organization | 5.13E-03 |
| 50 | GO:0040007: growth | 5.45E-03 |
| 51 | GO:0010089: xylem development | 5.77E-03 |
| 52 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 6.00E-03 |
| 53 | GO:0008380: RNA splicing | 6.40E-03 |
| 54 | GO:0000413: protein peptidyl-prolyl isomerization | 6.44E-03 |
| 55 | GO:0048825: cotyledon development | 7.49E-03 |
| 56 | GO:0009556: microsporogenesis | 7.49E-03 |
| 57 | GO:0010183: pollen tube guidance | 7.49E-03 |
| 58 | GO:0030163: protein catabolic process | 8.59E-03 |
| 59 | GO:0000910: cytokinesis | 9.75E-03 |
| 60 | GO:0009627: systemic acquired resistance | 1.10E-02 |
| 61 | GO:0016049: cell growth | 1.18E-02 |
| 62 | GO:0009817: defense response to fungus, incompatible interaction | 1.22E-02 |
| 63 | GO:0045087: innate immune response | 1.45E-02 |
| 64 | GO:0008283: cell proliferation | 1.73E-02 |
| 65 | GO:0009926: auxin polar transport | 1.73E-02 |
| 66 | GO:0051707: response to other organism | 1.73E-02 |
| 67 | GO:0009644: response to high light intensity | 1.83E-02 |
| 68 | GO:0006364: rRNA processing | 2.14E-02 |
| 69 | GO:0009736: cytokinin-activated signaling pathway | 2.14E-02 |
| 70 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.19E-02 |
| 71 | GO:0046686: response to cadmium ion | 2.23E-02 |
| 72 | GO:0009908: flower development | 2.45E-02 |
| 73 | GO:0009626: plant-type hypersensitive response | 2.52E-02 |
| 74 | GO:0009620: response to fungus | 2.58E-02 |
| 75 | GO:0009553: embryo sac development | 2.69E-02 |
| 76 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.68E-02 |
| 77 | GO:0006413: translational initiation | 3.86E-02 |
| 78 | GO:0009617: response to bacterium | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 5.98E-37 |
| 3 | GO:0003729: mRNA binding | 1.71E-09 |
| 4 | GO:0035614: snRNA stem-loop binding | 7.75E-05 |
| 5 | GO:0030619: U1 snRNA binding | 1.85E-04 |
| 6 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 3.11E-04 |
| 7 | GO:0004550: nucleoside diphosphate kinase activity | 4.49E-04 |
| 8 | GO:0070628: proteasome binding | 5.98E-04 |
| 9 | GO:0004576: oligosaccharyl transferase activity | 5.98E-04 |
| 10 | GO:0010011: auxin binding | 5.98E-04 |
| 11 | GO:0008237: metallopeptidase activity | 7.15E-04 |
| 12 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 7.57E-04 |
| 13 | GO:0031593: polyubiquitin binding | 9.24E-04 |
| 14 | GO:0003746: translation elongation factor activity | 1.29E-03 |
| 15 | GO:0042162: telomeric DNA binding | 1.29E-03 |
| 16 | GO:0043022: ribosome binding | 1.48E-03 |
| 17 | GO:0015288: porin activity | 1.48E-03 |
| 18 | GO:0008233: peptidase activity | 1.51E-03 |
| 19 | GO:0008308: voltage-gated anion channel activity | 1.69E-03 |
| 20 | GO:0001055: RNA polymerase II activity | 2.14E-03 |
| 21 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.61E-03 |
| 22 | GO:0001054: RNA polymerase I activity | 2.61E-03 |
| 23 | GO:0001056: RNA polymerase III activity | 2.86E-03 |
| 24 | GO:0003712: transcription cofactor activity | 3.66E-03 |
| 25 | GO:0019843: rRNA binding | 3.90E-03 |
| 26 | GO:0043130: ubiquitin binding | 4.23E-03 |
| 27 | GO:0004298: threonine-type endopeptidase activity | 4.82E-03 |
| 28 | GO:0004872: receptor activity | 7.49E-03 |
| 29 | GO:0003684: damaged DNA binding | 8.97E-03 |
| 30 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.22E-02 |
| 31 | GO:0003697: single-stranded DNA binding | 1.45E-02 |
| 32 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.93E-02 |
| 33 | GO:0051287: NAD binding | 1.98E-02 |
| 34 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-02 |
| 35 | GO:0015035: protein disulfide oxidoreductase activity | 2.81E-02 |
| 36 | GO:0003743: translation initiation factor activity | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0022625: cytosolic large ribosomal subunit | 1.02E-30 |
| 2 | GO:0005840: ribosome | 3.55E-30 |
| 3 | GO:0022626: cytosolic ribosome | 2.26E-23 |
| 4 | GO:0022627: cytosolic small ribosomal subunit | 2.90E-10 |
| 5 | GO:0005829: cytosol | 3.73E-10 |
| 6 | GO:0009506: plasmodesma | 3.95E-09 |
| 7 | GO:0015934: large ribosomal subunit | 5.71E-08 |
| 8 | GO:0005737: cytoplasm | 2.06E-07 |
| 9 | GO:0005730: nucleolus | 6.80E-06 |
| 10 | GO:0005774: vacuolar membrane | 7.23E-05 |
| 11 | GO:0005886: plasma membrane | 1.23E-04 |
| 12 | GO:0005697: telomerase holoenzyme complex | 1.85E-04 |
| 13 | GO:0035145: exon-exon junction complex | 1.85E-04 |
| 14 | GO:0000502: proteasome complex | 2.14E-04 |
| 15 | GO:0015935: small ribosomal subunit | 2.78E-04 |
| 16 | GO:0005853: eukaryotic translation elongation factor 1 complex | 3.11E-04 |
| 17 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.84E-04 |
| 18 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 4.49E-04 |
| 19 | GO:0005618: cell wall | 4.82E-04 |
| 20 | GO:0008250: oligosaccharyltransferase complex | 7.57E-04 |
| 21 | GO:0046930: pore complex | 1.69E-03 |
| 22 | GO:0005685: U1 snRNP | 1.91E-03 |
| 23 | GO:0031090: organelle membrane | 1.91E-03 |
| 24 | GO:0005736: DNA-directed RNA polymerase I complex | 1.91E-03 |
| 25 | GO:0005666: DNA-directed RNA polymerase III complex | 2.14E-03 |
| 26 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.37E-03 |
| 27 | GO:0005681: spliceosomal complex | 2.60E-03 |
| 28 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.61E-03 |
| 29 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.86E-03 |
| 30 | GO:0009508: plastid chromosome | 3.12E-03 |
| 31 | GO:0005773: vacuole | 3.19E-03 |
| 32 | GO:0000419: DNA-directed RNA polymerase V complex | 3.94E-03 |
| 33 | GO:0005769: early endosome | 3.94E-03 |
| 34 | GO:0005758: mitochondrial intermembrane space | 4.23E-03 |
| 35 | GO:0005741: mitochondrial outer membrane | 4.82E-03 |
| 36 | GO:0005839: proteasome core complex | 4.82E-03 |
| 37 | GO:0009295: nucleoid | 9.36E-03 |
| 38 | GO:0005788: endoplasmic reticulum lumen | 1.06E-02 |
| 39 | GO:0009507: chloroplast | 1.25E-02 |
| 40 | GO:0016607: nuclear speck | 2.47E-02 |
| 41 | GO:0016020: membrane | 2.52E-02 |
| 42 | GO:0005654: nucleoplasm | 3.17E-02 |
| 43 | GO:0009705: plant-type vacuole membrane | 4.06E-02 |