GO Enrichment Analysis of Co-expressed Genes with
AT3G24830
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 2 | GO:0006412: translation | 1.69E-131 |
| 3 | GO:0042254: ribosome biogenesis | 4.96E-50 |
| 4 | GO:0000027: ribosomal large subunit assembly | 1.32E-11 |
| 5 | GO:0000028: ribosomal small subunit assembly | 7.86E-08 |
| 6 | GO:1902626: assembly of large subunit precursor of preribosome | 1.41E-05 |
| 7 | GO:0006626: protein targeting to mitochondrion | 5.23E-05 |
| 8 | GO:0009955: adaxial/abaxial pattern specification | 1.78E-04 |
| 9 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 2.94E-04 |
| 10 | GO:0006407: rRNA export from nucleus | 2.94E-04 |
| 11 | GO:0006475: internal protein amino acid acetylation | 2.94E-04 |
| 12 | GO:0015801: aromatic amino acid transport | 2.94E-04 |
| 13 | GO:0017198: N-terminal peptidyl-serine acetylation | 2.94E-04 |
| 14 | GO:2001006: regulation of cellulose biosynthetic process | 2.94E-04 |
| 15 | GO:0000494: box C/D snoRNA 3'-end processing | 2.94E-04 |
| 16 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.94E-04 |
| 17 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.94E-04 |
| 18 | GO:1990258: histone glutamine methylation | 2.94E-04 |
| 19 | GO:0009651: response to salt stress | 4.01E-04 |
| 20 | GO:0000387: spliceosomal snRNP assembly | 5.16E-04 |
| 21 | GO:0006432: phenylalanyl-tRNA aminoacylation | 6.45E-04 |
| 22 | GO:0045905: positive regulation of translational termination | 6.45E-04 |
| 23 | GO:0071668: plant-type cell wall assembly | 6.45E-04 |
| 24 | GO:0045901: positive regulation of translational elongation | 6.45E-04 |
| 25 | GO:0006452: translational frameshifting | 6.45E-04 |
| 26 | GO:0006820: anion transport | 7.93E-04 |
| 27 | GO:0009735: response to cytokinin | 1.02E-03 |
| 28 | GO:0002181: cytoplasmic translation | 1.04E-03 |
| 29 | GO:0045793: positive regulation of cell size | 1.04E-03 |
| 30 | GO:0034227: tRNA thio-modification | 1.04E-03 |
| 31 | GO:0042256: mature ribosome assembly | 1.04E-03 |
| 32 | GO:0090506: axillary shoot meristem initiation | 1.04E-03 |
| 33 | GO:0030150: protein import into mitochondrial matrix | 1.39E-03 |
| 34 | GO:0006168: adenine salvage | 1.50E-03 |
| 35 | GO:0032877: positive regulation of DNA endoreduplication | 1.50E-03 |
| 36 | GO:0006166: purine ribonucleoside salvage | 1.50E-03 |
| 37 | GO:0070301: cellular response to hydrogen peroxide | 1.50E-03 |
| 38 | GO:0006241: CTP biosynthetic process | 1.50E-03 |
| 39 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.50E-03 |
| 40 | GO:0006165: nucleoside diphosphate phosphorylation | 1.50E-03 |
| 41 | GO:0006228: UTP biosynthetic process | 1.50E-03 |
| 42 | GO:0006164: purine nucleotide biosynthetic process | 1.50E-03 |
| 43 | GO:2000032: regulation of secondary shoot formation | 2.01E-03 |
| 44 | GO:0051781: positive regulation of cell division | 2.01E-03 |
| 45 | GO:0042274: ribosomal small subunit biogenesis | 2.01E-03 |
| 46 | GO:0006183: GTP biosynthetic process | 2.01E-03 |
| 47 | GO:0044209: AMP salvage | 2.56E-03 |
| 48 | GO:0031167: rRNA methylation | 2.56E-03 |
| 49 | GO:0006414: translational elongation | 2.69E-03 |
| 50 | GO:0045040: protein import into mitochondrial outer membrane | 3.16E-03 |
| 51 | GO:0043248: proteasome assembly | 3.16E-03 |
| 52 | GO:1901001: negative regulation of response to salt stress | 3.81E-03 |
| 53 | GO:0000398: mRNA splicing, via spliceosome | 4.28E-03 |
| 54 | GO:0009690: cytokinin metabolic process | 5.21E-03 |
| 55 | GO:0009808: lignin metabolic process | 5.98E-03 |
| 56 | GO:0001510: RNA methylation | 5.98E-03 |
| 57 | GO:0006413: translational initiation | 6.54E-03 |
| 58 | GO:0006189: 'de novo' IMP biosynthetic process | 6.77E-03 |
| 59 | GO:0048589: developmental growth | 6.77E-03 |
| 60 | GO:0098656: anion transmembrane transport | 6.77E-03 |
| 61 | GO:0009245: lipid A biosynthetic process | 6.77E-03 |
| 62 | GO:0009793: embryo development ending in seed dormancy | 9.28E-03 |
| 63 | GO:0010015: root morphogenesis | 9.38E-03 |
| 64 | GO:0006913: nucleocytoplasmic transport | 9.38E-03 |
| 65 | GO:0016925: protein sumoylation | 1.03E-02 |
| 66 | GO:0008283: cell proliferation | 1.04E-02 |
| 67 | GO:0009644: response to high light intensity | 1.13E-02 |
| 68 | GO:0010102: lateral root morphogenesis | 1.13E-02 |
| 69 | GO:0009965: leaf morphogenesis | 1.17E-02 |
| 70 | GO:0006446: regulation of translational initiation | 1.23E-02 |
| 71 | GO:0048467: gynoecium development | 1.23E-02 |
| 72 | GO:0006364: rRNA processing | 1.41E-02 |
| 73 | GO:0006406: mRNA export from nucleus | 1.55E-02 |
| 74 | GO:0006289: nucleotide-excision repair | 1.55E-02 |
| 75 | GO:0009116: nucleoside metabolic process | 1.55E-02 |
| 76 | GO:0003333: amino acid transmembrane transport | 1.78E-02 |
| 77 | GO:0007005: mitochondrion organization | 1.90E-02 |
| 78 | GO:0040007: growth | 2.02E-02 |
| 79 | GO:0010089: xylem development | 2.14E-02 |
| 80 | GO:0015031: protein transport | 2.32E-02 |
| 81 | GO:0008033: tRNA processing | 2.40E-02 |
| 82 | GO:0000413: protein peptidyl-prolyl isomerization | 2.40E-02 |
| 83 | GO:0009409: response to cold | 2.58E-02 |
| 84 | GO:0080156: mitochondrial mRNA modification | 2.94E-02 |
| 85 | GO:0046686: response to cadmium ion | 3.26E-02 |
| 86 | GO:0010252: auxin homeostasis | 3.37E-02 |
| 87 | GO:0010286: heat acclimation | 3.51E-02 |
| 88 | GO:0000910: cytokinesis | 3.66E-02 |
| 89 | GO:0006811: ion transport | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 1.81E-156 |
| 3 | GO:0003729: mRNA binding | 9.71E-37 |
| 4 | GO:0019843: rRNA binding | 3.33E-12 |
| 5 | GO:0008097: 5S rRNA binding | 3.17E-05 |
| 6 | GO:0043022: ribosome binding | 2.94E-04 |
| 7 | GO:1990259: histone-glutamine methyltransferase activity | 2.94E-04 |
| 8 | GO:0015288: porin activity | 2.94E-04 |
| 9 | GO:1990189: peptide-serine-N-acetyltransferase activity | 2.94E-04 |
| 10 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 2.94E-04 |
| 11 | GO:0008308: voltage-gated anion channel activity | 3.62E-04 |
| 12 | GO:0015173: aromatic amino acid transmembrane transporter activity | 6.45E-04 |
| 13 | GO:0004826: phenylalanine-tRNA ligase activity | 6.45E-04 |
| 14 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.44E-04 |
| 15 | GO:0015266: protein channel activity | 8.98E-04 |
| 16 | GO:0008649: rRNA methyltransferase activity | 1.04E-03 |
| 17 | GO:0008430: selenium binding | 1.04E-03 |
| 18 | GO:0003746: translation elongation factor activity | 1.13E-03 |
| 19 | GO:0003999: adenine phosphoribosyltransferase activity | 1.50E-03 |
| 20 | GO:0004550: nucleoside diphosphate kinase activity | 1.50E-03 |
| 21 | GO:0070628: proteasome binding | 2.01E-03 |
| 22 | GO:0010011: auxin binding | 2.01E-03 |
| 23 | GO:0005275: amine transmembrane transporter activity | 2.56E-03 |
| 24 | GO:0031386: protein tag | 2.56E-03 |
| 25 | GO:0031593: polyubiquitin binding | 3.16E-03 |
| 26 | GO:0031177: phosphopantetheine binding | 3.16E-03 |
| 27 | GO:0000035: acyl binding | 3.81E-03 |
| 28 | GO:0042162: telomeric DNA binding | 4.49E-03 |
| 29 | GO:0030515: snoRNA binding | 4.49E-03 |
| 30 | GO:0003723: RNA binding | 4.85E-03 |
| 31 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 5.21E-03 |
| 32 | GO:0001055: RNA polymerase II activity | 7.60E-03 |
| 33 | GO:0003697: single-stranded DNA binding | 8.08E-03 |
| 34 | GO:0003743: translation initiation factor activity | 8.72E-03 |
| 35 | GO:0001054: RNA polymerase I activity | 9.38E-03 |
| 36 | GO:0044183: protein binding involved in protein folding | 9.38E-03 |
| 37 | GO:0004129: cytochrome-c oxidase activity | 9.38E-03 |
| 38 | GO:0001056: RNA polymerase III activity | 1.03E-02 |
| 39 | GO:0000049: tRNA binding | 1.03E-02 |
| 40 | GO:0043130: ubiquitin binding | 1.55E-02 |
| 41 | GO:0004298: threonine-type endopeptidase activity | 1.78E-02 |
| 42 | GO:0008080: N-acetyltransferase activity | 2.53E-02 |
| 43 | GO:0004872: receptor activity | 2.80E-02 |
| 44 | GO:0003684: damaged DNA binding | 3.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005840: ribosome | 2.82E-119 |
| 3 | GO:0022626: cytosolic ribosome | 6.83E-102 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 7.34E-96 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 7.80E-64 |
| 6 | GO:0005737: cytoplasm | 4.50E-37 |
| 7 | GO:0005829: cytosol | 1.95E-31 |
| 8 | GO:0005730: nucleolus | 6.24E-29 |
| 9 | GO:0009506: plasmodesma | 2.70E-23 |
| 10 | GO:0005774: vacuolar membrane | 1.76E-13 |
| 11 | GO:0015934: large ribosomal subunit | 6.94E-12 |
| 12 | GO:0016020: membrane | 1.31E-10 |
| 13 | GO:0005773: vacuole | 2.56E-08 |
| 14 | GO:0005618: cell wall | 1.13E-07 |
| 15 | GO:0015935: small ribosomal subunit | 1.32E-07 |
| 16 | GO:0005732: small nucleolar ribonucleoprotein complex | 9.07E-06 |
| 17 | GO:0005886: plasma membrane | 1.70E-04 |
| 18 | GO:0030686: 90S preribosome | 2.94E-04 |
| 19 | GO:0046930: pore complex | 3.62E-04 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 3.62E-04 |
| 21 | GO:0071011: precatalytic spliceosome | 5.16E-04 |
| 22 | GO:0031415: NatA complex | 6.45E-04 |
| 23 | GO:0005697: telomerase holoenzyme complex | 6.45E-04 |
| 24 | GO:0071013: catalytic step 2 spliceosome | 6.94E-04 |
| 25 | GO:0019013: viral nucleocapsid | 8.98E-04 |
| 26 | GO:0034719: SMN-Sm protein complex | 1.04E-03 |
| 27 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.04E-03 |
| 28 | GO:1990726: Lsm1-7-Pat1 complex | 1.50E-03 |
| 29 | GO:0005741: mitochondrial outer membrane | 1.68E-03 |
| 30 | GO:0005682: U5 snRNP | 2.01E-03 |
| 31 | GO:0000502: proteasome complex | 2.27E-03 |
| 32 | GO:0005687: U4 snRNP | 2.56E-03 |
| 33 | GO:0097526: spliceosomal tri-snRNP complex | 2.56E-03 |
| 34 | GO:0031428: box C/D snoRNP complex | 3.16E-03 |
| 35 | GO:0009507: chloroplast | 3.37E-03 |
| 36 | GO:0005689: U12-type spliceosomal complex | 3.81E-03 |
| 37 | GO:0016272: prefoldin complex | 3.81E-03 |
| 38 | GO:0071004: U2-type prespliceosome | 5.21E-03 |
| 39 | GO:0005688: U6 snRNP | 5.21E-03 |
| 40 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 5.98E-03 |
| 41 | GO:0005736: DNA-directed RNA polymerase I complex | 6.77E-03 |
| 42 | GO:0005685: U1 snRNP | 6.77E-03 |
| 43 | GO:0005666: DNA-directed RNA polymerase III complex | 7.60E-03 |
| 44 | GO:0015030: Cajal body | 7.60E-03 |
| 45 | GO:0005686: U2 snRNP | 8.48E-03 |
| 46 | GO:0000418: DNA-directed RNA polymerase IV complex | 8.48E-03 |
| 47 | GO:0005740: mitochondrial envelope | 8.48E-03 |
| 48 | GO:0005852: eukaryotic translation initiation factor 3 complex | 9.38E-03 |
| 49 | GO:0008541: proteasome regulatory particle, lid subcomplex | 9.38E-03 |
| 50 | GO:0031307: integral component of mitochondrial outer membrane | 1.03E-02 |
| 51 | GO:0032040: small-subunit processome | 1.03E-02 |
| 52 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.03E-02 |
| 53 | GO:0009508: plastid chromosome | 1.13E-02 |
| 54 | GO:0000419: DNA-directed RNA polymerase V complex | 1.44E-02 |
| 55 | GO:0005758: mitochondrial intermembrane space | 1.55E-02 |
| 56 | GO:0070469: respiratory chain | 1.66E-02 |
| 57 | GO:0005681: spliceosomal complex | 1.67E-02 |
| 58 | GO:0005839: proteasome core complex | 1.78E-02 |
| 59 | GO:0009295: nucleoid | 3.51E-02 |
| 60 | GO:0005622: intracellular | 3.79E-02 |
| 61 | GO:0000932: P-body | 3.82E-02 |
| 62 | GO:0005788: endoplasmic reticulum lumen | 3.97E-02 |