co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G24520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
3	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
4	GO:0019593: mannitol biosynthetic process	0.00E+00
5	GO:0009873: ethylene-activated signaling pathway	3.33E-10
6	GO:0006633: fatty acid biosynthetic process	4.12E-08
7	GO:0042335: cuticle development	2.10E-07
8	GO:0009409: response to cold	5.05E-07
9	GO:0009611: response to wounding	3.41E-06
10	GO:0009737: response to abscisic acid	5.01E-06
11	GO:0000038: very long-chain fatty acid metabolic process	2.18E-05
12	GO:0009414: response to water deprivation	4.08E-05
13	GO:0010143: cutin biosynthetic process	4.16E-05
14	GO:0010025: wax biosynthetic process	5.94E-05
15	GO:0010200: response to chitin	9.24E-05
16	GO:0035435: phosphate ion transmembrane transport	9.62E-05
17	GO:0006631: fatty acid metabolic process	1.16E-04
18	GO:0042538: hyperosmotic salinity response	1.99E-04
19	GO:2000070: regulation of response to water deprivation	2.22E-04
20	GO:0009865: pollen tube adhesion	2.43E-04
21	GO:0080051: cutin transport	2.43E-04
22	GO:0009609: response to symbiotic bacterium	2.43E-04
23	GO:0051180: vitamin transport	2.43E-04
24	GO:0030974: thiamine pyrophosphate transport	2.43E-04
25	GO:0098656: anion transmembrane transport	3.32E-04
26	GO:2000280: regulation of root development	3.94E-04
27	GO:0010507: negative regulation of autophagy	5.39E-04
28	GO:0015709: thiosulfate transport	5.39E-04
29	GO:0071422: succinate transmembrane transport	5.39E-04
30	GO:0031407: oxylipin metabolic process	5.39E-04
31	GO:0010289: homogalacturonan biosynthetic process	5.39E-04
32	GO:0015908: fatty acid transport	5.39E-04
33	GO:0015893: drug transport	5.39E-04
34	GO:1901679: nucleotide transmembrane transport	5.39E-04
35	GO:0015786: UDP-glucose transport	5.39E-04
36	GO:0006811: ion transport	6.77E-04
37	GO:0009062: fatty acid catabolic process	8.75E-04
38	GO:0090630: activation of GTPase activity	8.75E-04
39	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	8.75E-04
40	GO:0015783: GDP-fucose transport	8.75E-04
41	GO:0010325: raffinose family oligosaccharide biosynthetic process	8.75E-04
42	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	8.75E-04
43	GO:0080168: abscisic acid transport	8.75E-04
44	GO:0080121: AMP transport	8.75E-04
45	GO:0006839: mitochondrial transport	9.48E-04
46	GO:0009695: jasmonic acid biosynthetic process	1.17E-03
47	GO:0010371: regulation of gibberellin biosynthetic process	1.25E-03
48	GO:0015729: oxaloacetate transport	1.25E-03
49	GO:0072334: UDP-galactose transmembrane transport	1.25E-03
50	GO:0009269: response to desiccation	1.28E-03
51	GO:0031408: oxylipin biosynthetic process	1.28E-03
52	GO:0001944: vasculature development	1.53E-03
53	GO:0010222: stem vascular tissue pattern formation	1.67E-03
54	GO:0046345: abscisic acid catabolic process	1.67E-03
55	GO:0022622: root system development	1.67E-03
56	GO:0071585: detoxification of cadmium ion	1.67E-03
57	GO:0015867: ATP transport	1.67E-03
58	GO:0006970: response to osmotic stress	1.99E-03
59	GO:0048868: pollen tube development	2.09E-03
60	GO:0006665: sphingolipid metabolic process	2.13E-03
61	GO:0009247: glycolipid biosynthetic process	2.13E-03
62	GO:0071423: malate transmembrane transport	2.13E-03
63	GO:0009749: response to glucose	2.40E-03
64	GO:0009624: response to nematode	2.51E-03
65	GO:0000302: response to reactive oxygen species	2.57E-03
66	GO:0015866: ADP transport	2.62E-03
67	GO:0009913: epidermal cell differentiation	2.62E-03
68	GO:1900425: negative regulation of defense response to bacterium	2.62E-03
69	GO:0009416: response to light stimulus	2.78E-03
70	GO:0050832: defense response to fungus	3.11E-03
71	GO:0019760: glucosinolate metabolic process	3.11E-03
72	GO:0098655: cation transmembrane transport	3.15E-03
73	GO:0010555: response to mannitol	3.15E-03
74	GO:0045926: negative regulation of growth	3.15E-03
75	GO:1902074: response to salt	3.72E-03
76	GO:0032880: regulation of protein localization	3.72E-03
77	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.72E-03
78	GO:0006401: RNA catabolic process	3.72E-03
79	GO:0009610: response to symbiotic fungus	3.72E-03
80	GO:0006955: immune response	3.72E-03
81	GO:0030497: fatty acid elongation	3.72E-03
82	GO:0008272: sulfate transport	3.72E-03
83	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.92E-03
84	GO:0010029: regulation of seed germination	3.92E-03
85	GO:0019375: galactolipid biosynthetic process	4.31E-03
86	GO:0009415: response to water	4.31E-03
87	GO:0007155: cell adhesion	4.31E-03
88	GO:0008610: lipid biosynthetic process	4.31E-03
89	GO:0009751: response to salicylic acid	4.38E-03
90	GO:0009753: response to jasmonic acid	4.98E-03
91	GO:0010345: suberin biosynthetic process	5.59E-03
92	GO:0009631: cold acclimation	5.59E-03
93	GO:0090305: nucleic acid phosphodiester bond hydrolysis	5.59E-03
94	GO:0045087: innate immune response	6.13E-03
95	GO:0042761: very long-chain fatty acid biosynthetic process	6.27E-03
96	GO:0055062: phosphate ion homeostasis	6.99E-03
97	GO:0018119: peptidyl-cysteine S-nitrosylation	7.73E-03
98	GO:0010015: root morphogenesis	7.73E-03
99	GO:0008285: negative regulation of cell proliferation	7.73E-03
100	GO:0009744: response to sucrose	7.90E-03
101	GO:0051707: response to other organism	7.90E-03
102	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.49E-03
103	GO:0000266: mitochondrial fission	8.49E-03
104	GO:0016024: CDP-diacylglycerol biosynthetic process	8.49E-03
105	GO:0045037: protein import into chloroplast stroma	8.49E-03
106	GO:0050826: response to freezing	9.29E-03
107	GO:0018107: peptidyl-threonine phosphorylation	9.29E-03
108	GO:0009725: response to hormone	9.29E-03
109	GO:0005986: sucrose biosynthetic process	9.29E-03
110	GO:0010588: cotyledon vascular tissue pattern formation	9.29E-03
111	GO:2000012: regulation of auxin polar transport	9.29E-03
112	GO:0071555: cell wall organization	9.55E-03
113	GO:0009809: lignin biosynthetic process	1.07E-02
114	GO:0070588: calcium ion transmembrane transport	1.10E-02
115	GO:0009651: response to salt stress	1.13E-02
116	GO:0080167: response to karrikin	1.15E-02
117	GO:0006636: unsaturated fatty acid biosynthetic process	1.18E-02
118	GO:0009833: plant-type primary cell wall biogenesis	1.18E-02
119	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.20E-02
120	GO:0030150: protein import into mitochondrial matrix	1.27E-02
121	GO:0048367: shoot system development	1.30E-02
122	GO:0042545: cell wall modification	1.48E-02
123	GO:0045892: negative regulation of transcription, DNA-templated	1.48E-02
124	GO:0006351: transcription, DNA-templated	1.50E-02
125	GO:0055085: transmembrane transport	1.53E-02
126	GO:0048443: stamen development	1.76E-02
127	GO:0070417: cellular response to cold	1.86E-02
128	GO:0008284: positive regulation of cell proliferation	1.86E-02
129	GO:0000271: polysaccharide biosynthetic process	1.97E-02
130	GO:0042631: cellular response to water deprivation	1.97E-02
131	GO:0010268: brassinosteroid homeostasis	2.07E-02
132	GO:0045489: pectin biosynthetic process	2.07E-02
133	GO:0009958: positive gravitropism	2.07E-02
134	GO:0006355: regulation of transcription, DNA-templated	2.10E-02
135	GO:0006814: sodium ion transport	2.18E-02
136	GO:0009790: embryo development	2.23E-02
137	GO:0008654: phospholipid biosynthetic process	2.29E-02
138	GO:0006635: fatty acid beta-oxidation	2.41E-02
139	GO:0016132: brassinosteroid biosynthetic process	2.41E-02
140	GO:0080156: mitochondrial mRNA modification	2.41E-02
141	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.41E-02
142	GO:0010193: response to ozone	2.41E-02
143	GO:0010150: leaf senescence	2.64E-02
144	GO:0045490: pectin catabolic process	2.64E-02
145	GO:0007623: circadian rhythm	2.64E-02
146	GO:0016125: sterol metabolic process	2.76E-02
147	GO:0009639: response to red or far red light	2.76E-02
148	GO:0006904: vesicle docking involved in exocytosis	2.88E-02
149	GO:0007166: cell surface receptor signaling pathway	3.01E-02
150	GO:0051607: defense response to virus	3.01E-02
151	GO:0006470: protein dephosphorylation	3.01E-02
152	GO:0010027: thylakoid membrane organization	3.13E-02
153	GO:0010468: regulation of gene expression	3.15E-02
154	GO:0016049: cell growth	3.65E-02
155	GO:0010311: lateral root formation	3.92E-02
156	GO:0048527: lateral root development	4.19E-02
157	GO:0016051: carbohydrate biosynthetic process	4.48E-02
158	GO:0009723: response to ethylene	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.14E-10
4	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.14E-10
5	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.14E-10
6	GO:0009922: fatty acid elongase activity	2.02E-09
7	GO:0070330: aromatase activity	1.73E-08
8	GO:0018685: alkane 1-monooxygenase activity	5.58E-07
9	GO:0016629: 12-oxophytodienoate reductase activity	2.75E-06
10	GO:0016746: transferase activity, transferring acyl groups	4.83E-05
11	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	9.62E-05
12	GO:0015297: antiporter activity	1.34E-04
13	GO:0015245: fatty acid transporter activity	2.43E-04
14	GO:0008809: carnitine racemase activity	2.43E-04
15	GO:0090422: thiamine pyrophosphate transporter activity	2.43E-04
16	GO:0090440: abscisic acid transporter activity	2.43E-04
17	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.43E-04
18	GO:1901677: phosphate transmembrane transporter activity	5.39E-04
19	GO:0004103: choline kinase activity	5.39E-04
20	GO:0001047: core promoter binding	5.39E-04
21	GO:0042389: omega-3 fatty acid desaturase activity	5.39E-04
22	GO:0017040: ceramidase activity	5.39E-04
23	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.39E-04
24	GO:0015117: thiosulfate transmembrane transporter activity	5.39E-04
25	GO:0046423: allene-oxide cyclase activity	8.75E-04
26	GO:0004383: guanylate cyclase activity	8.75E-04
27	GO:0005457: GDP-fucose transmembrane transporter activity	8.75E-04
28	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.75E-04
29	GO:0015141: succinate transmembrane transporter activity	8.75E-04
30	GO:0047274: galactinol-sucrose galactosyltransferase activity	8.75E-04
31	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.75E-04
32	GO:0005460: UDP-glucose transmembrane transporter activity	1.25E-03
33	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.25E-03
34	GO:0001653: peptide receptor activity	1.25E-03
35	GO:0005432: calcium:sodium antiporter activity	1.25E-03
36	GO:0015131: oxaloacetate transmembrane transporter activity	1.25E-03
37	GO:0035250: UDP-galactosyltransferase activity	1.25E-03
38	GO:0003883: CTP synthase activity	1.25E-03
39	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.13E-03
40	GO:0005459: UDP-galactose transmembrane transporter activity	2.13E-03
41	GO:0080122: AMP transmembrane transporter activity	2.13E-03
42	GO:0010181: FMN binding	2.24E-03
43	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.62E-03
44	GO:0016791: phosphatase activity	3.11E-03
45	GO:0005347: ATP transmembrane transporter activity	3.15E-03
46	GO:0015217: ADP transmembrane transporter activity	3.15E-03
47	GO:0102391: decanoate--CoA ligase activity	3.15E-03
48	GO:0004467: long-chain fatty acid-CoA ligase activity	3.72E-03
49	GO:0016621: cinnamoyl-CoA reductase activity	3.72E-03
50	GO:0015140: malate transmembrane transporter activity	3.72E-03
51	GO:0015491: cation:cation antiporter activity	4.31E-03
52	GO:0015288: porin activity	4.31E-03
53	GO:0052747: sinapyl alcohol dehydrogenase activity	4.31E-03
54	GO:0043565: sequence-specific DNA binding	4.35E-03
55	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.60E-03
56	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	4.93E-03
57	GO:0005096: GTPase activator activity	5.08E-03
58	GO:0004864: protein phosphatase inhibitor activity	6.99E-03
59	GO:0003677: DNA binding	7.13E-03
60	GO:0003700: transcription factor activity, sequence-specific DNA binding	7.32E-03
61	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.49E-03
62	GO:0015116: sulfate transmembrane transporter activity	8.49E-03
63	GO:0005315: inorganic phosphate transmembrane transporter activity	9.29E-03
64	GO:0005262: calcium channel activity	9.29E-03
65	GO:0015114: phosphate ion transmembrane transporter activity	9.29E-03
66	GO:0000175: 3'-5'-exoribonuclease activity	9.29E-03
67	GO:0015266: protein channel activity	9.29E-03
68	GO:0044212: transcription regulatory region DNA binding	9.55E-03
69	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.01E-02
70	GO:0008083: growth factor activity	1.01E-02
71	GO:0045330: aspartyl esterase activity	1.18E-02
72	GO:0051087: chaperone binding	1.37E-02
73	GO:0030599: pectinesterase activity	1.43E-02
74	GO:0004540: ribonuclease activity	1.46E-02
75	GO:0004707: MAP kinase activity	1.46E-02
76	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.56E-02
77	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.62E-02
78	GO:0004722: protein serine/threonine phosphatase activity	1.63E-02
79	GO:0008514: organic anion transmembrane transporter activity	1.76E-02
80	GO:0019825: oxygen binding	1.82E-02
81	GO:0009055: electron carrier activity	2.07E-02
82	GO:0015144: carbohydrate transmembrane transporter activity	2.29E-02
83	GO:0004872: receptor activity	2.29E-02
84	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.46E-02
85	GO:0004518: nuclease activity	2.52E-02
86	GO:0005351: sugar:proton symporter activity	2.58E-02
87	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.88E-02
88	GO:0005506: iron ion binding	2.99E-02
89	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.35E-02
90	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.78E-02
91	GO:0015238: drug transmembrane transporter activity	3.92E-02
92	GO:0016788: hydrolase activity, acting on ester bonds	4.15E-02
93	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0046658: anchored component of plasma membrane	1.84E-07
3	GO:0031225: anchored component of membrane	1.03E-04
4	GO:0070382: exocytic vesicle	2.43E-04
5	GO:0016021: integral component of membrane	3.70E-04
6	GO:0042170: plastid membrane	5.39E-04
7	GO:0031357: integral component of chloroplast inner membrane	5.39E-04
8	GO:0009897: external side of plasma membrane	8.75E-04
9	GO:0045177: apical part of cell	1.25E-03
10	GO:0009527: plastid outer membrane	1.67E-03
11	GO:0000178: exosome (RNase complex)	2.13E-03
12	GO:0000793: condensed chromosome	2.62E-03
13	GO:0000794: condensed nuclear chromosome	3.72E-03
14	GO:0005743: mitochondrial inner membrane	4.00E-03
15	GO:0031305: integral component of mitochondrial inner membrane	4.31E-03
16	GO:0046930: pore complex	4.93E-03
17	GO:0016604: nuclear body	6.27E-03
18	GO:0016020: membrane	6.69E-03
19	GO:0090406: pollen tube	7.90E-03
20	GO:0005938: cell cortex	9.29E-03
21	GO:0009505: plant-type cell wall	1.41E-02
22	GO:0009706: chloroplast inner membrane	1.52E-02
23	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.76E-02
24	GO:0005770: late endosome	2.07E-02
25	GO:0005783: endoplasmic reticulum	2.25E-02
26	GO:0000145: exocyst	2.52E-02
27	GO:0005622: intracellular	2.53E-02
28	GO:0005778: peroxisomal membrane	2.88E-02
29	GO:0000932: P-body	3.13E-02
30	GO:0009707: chloroplast outer membrane	3.78E-02
31	GO:0005618: cell wall	3.98E-02
32	GO:0009506: plasmodesma	4.37E-02
33	GO:0000139: Golgi membrane	4.73E-02
34	GO:0005874: microtubule	4.86E-02