Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G24170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0023052: signaling0.00E+00
2GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport0.00E+00
3GO:0006073: cellular glucan metabolic process0.00E+00
4GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
5GO:0042908: xenobiotic transport0.00E+00
6GO:0009856: pollination0.00E+00
7GO:0009722: detection of cytokinin stimulus0.00E+00
8GO:0018293: protein-FAD linkage0.00E+00
9GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
10GO:0006593: ornithine catabolic process0.00E+00
11GO:0071345: cellular response to cytokine stimulus0.00E+00
12GO:0055114: oxidation-reduction process1.69E-05
13GO:0010189: vitamin E biosynthetic process7.42E-05
14GO:0015996: chlorophyll catabolic process1.59E-04
15GO:0006560: proline metabolic process1.69E-04
16GO:0019544: arginine catabolic process to glutamate1.69E-04
17GO:0015798: myo-inositol transport1.69E-04
18GO:0006148: inosine catabolic process1.69E-04
19GO:0006835: dicarboxylic acid transport1.69E-04
20GO:1903409: reactive oxygen species biosynthetic process1.69E-04
21GO:0009852: auxin catabolic process1.69E-04
22GO:0046686: response to cadmium ion1.70E-04
23GO:0009970: cellular response to sulfate starvation2.75E-04
24GO:0009684: indoleacetic acid biosynthetic process3.19E-04
25GO:0002213: defense response to insect3.66E-04
26GO:0019388: galactose catabolic process3.83E-04
27GO:0080183: response to photooxidative stress3.83E-04
28GO:0043100: pyrimidine nucleobase salvage3.83E-04
29GO:0006123: mitochondrial electron transport, cytochrome c to oxygen3.83E-04
30GO:0010133: proline catabolic process to glutamate3.83E-04
31GO:0009915: phloem sucrose loading3.83E-04
32GO:0032527: protein exit from endoplasmic reticulum3.83E-04
33GO:0006006: glucose metabolic process4.18E-04
34GO:0006099: tricarboxylic acid cycle4.44E-04
35GO:0071230: cellular response to amino acid stimulus6.25E-04
36GO:0051646: mitochondrion localization6.25E-04
37GO:1901562: response to paraquat6.25E-04
38GO:0045493: xylan catabolic process6.25E-04
39GO:0016570: histone modification6.25E-04
40GO:0015700: arsenite transport8.93E-04
41GO:0009590: detection of gravity8.93E-04
42GO:0006572: tyrosine catabolic process8.93E-04
43GO:1902476: chloride transmembrane transport8.93E-04
44GO:0080022: primary root development1.17E-03
45GO:0042391: regulation of membrane potential1.17E-03
46GO:0010600: regulation of auxin biosynthetic process1.18E-03
47GO:0044205: 'de novo' UMP biosynthetic process1.18E-03
48GO:0009902: chloroplast relocation1.18E-03
49GO:0032366: intracellular sterol transport1.18E-03
50GO:0006542: glutamine biosynthetic process1.18E-03
51GO:0006646: phosphatidylethanolamine biosynthetic process1.18E-03
52GO:0070534: protein K63-linked ubiquitination1.18E-03
53GO:0015743: malate transport1.18E-03
54GO:0051781: positive regulation of cell division1.18E-03
55GO:0015846: polyamine transport1.18E-03
56GO:0006221: pyrimidine nucleotide biosynthetic process1.18E-03
57GO:0006090: pyruvate metabolic process1.50E-03
58GO:0007029: endoplasmic reticulum organization1.50E-03
59GO:0009435: NAD biosynthetic process1.50E-03
60GO:0009697: salicylic acid biosynthetic process1.50E-03
61GO:0009058: biosynthetic process1.84E-03
62GO:0006561: proline biosynthetic process1.85E-03
63GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.85E-03
64GO:0006301: postreplication repair1.85E-03
65GO:0006555: methionine metabolic process1.85E-03
66GO:0070814: hydrogen sulfide biosynthetic process1.85E-03
67GO:0006120: mitochondrial electron transport, NADH to ubiquinone2.22E-03
68GO:0019509: L-methionine salvage from methylthioadenosine2.22E-03
69GO:1901001: negative regulation of response to salt stress2.22E-03
70GO:0005975: carbohydrate metabolic process2.28E-03
71GO:0009816: defense response to bacterium, incompatible interaction2.35E-03
72GO:0019745: pentacyclic triterpenoid biosynthetic process2.61E-03
73GO:0008272: sulfate transport2.61E-03
74GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.61E-03
75GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.61E-03
76GO:0006368: transcription elongation from RNA polymerase II promoter2.61E-03
77GO:0006821: chloride transport2.61E-03
78GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c2.61E-03
79GO:0048658: anther wall tapetum development3.02E-03
80GO:0005978: glycogen biosynthetic process3.02E-03
81GO:0030091: protein repair3.02E-03
82GO:0080144: amino acid homeostasis3.91E-03
83GO:0046685: response to arsenic-containing substance3.91E-03
84GO:0048354: mucilage biosynthetic process involved in seed coat development4.38E-03
85GO:0051453: regulation of intracellular pH4.38E-03
86GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process4.38E-03
87GO:0000103: sulfate assimilation4.87E-03
88GO:0010192: mucilage biosynthetic process4.87E-03
89GO:0006896: Golgi to vacuole transport4.87E-03
90GO:0009636: response to toxic substance5.27E-03
91GO:0072593: reactive oxygen species metabolic process5.38E-03
92GO:0000272: polysaccharide catabolic process5.38E-03
93GO:0048229: gametophyte development5.38E-03
94GO:0006816: calcium ion transport5.38E-03
95GO:0006855: drug transmembrane transport5.47E-03
96GO:0042538: hyperosmotic salinity response5.89E-03
97GO:0071365: cellular response to auxin stimulus5.91E-03
98GO:0006790: sulfur compound metabolic process5.91E-03
99GO:0010102: lateral root morphogenesis6.46E-03
100GO:0006108: malate metabolic process6.46E-03
101GO:0006807: nitrogen compound metabolic process6.46E-03
102GO:0009691: cytokinin biosynthetic process6.46E-03
103GO:0046274: lignin catabolic process6.46E-03
104GO:0006094: gluconeogenesis6.46E-03
105GO:0007034: vacuolar transport7.02E-03
106GO:0009266: response to temperature stimulus7.02E-03
107GO:0006096: glycolytic process7.47E-03
108GO:0046854: phosphatidylinositol phosphorylation7.60E-03
109GO:0009626: plant-type hypersensitive response7.97E-03
110GO:0006636: unsaturated fatty acid biosynthetic process8.20E-03
111GO:0019762: glucosinolate catabolic process8.20E-03
112GO:0051017: actin filament bundle assembly8.81E-03
113GO:0006874: cellular calcium ion homeostasis9.44E-03
114GO:0035428: hexose transmembrane transport1.08E-02
115GO:0019748: secondary metabolic process1.08E-02
116GO:0010017: red or far-red light signaling pathway1.08E-02
117GO:0016226: iron-sulfur cluster assembly1.08E-02
118GO:0040007: growth1.14E-02
119GO:0048653: anther development1.36E-02
120GO:0071555: cell wall organization1.40E-02
121GO:0010154: fruit development1.43E-02
122GO:0046323: glucose import1.43E-02
123GO:0009741: response to brassinosteroid1.43E-02
124GO:0006520: cellular amino acid metabolic process1.43E-02
125GO:0006814: sodium ion transport1.51E-02
126GO:0010150: leaf senescence1.56E-02
127GO:0019252: starch biosynthetic process1.58E-02
128GO:0008654: phospholipid biosynthetic process1.58E-02
129GO:0009851: auxin biosynthetic process1.58E-02
130GO:0006623: protein targeting to vacuole1.58E-02
131GO:0009630: gravitropism1.74E-02
132GO:0009617: response to bacterium1.86E-02
133GO:0010252: auxin homeostasis1.90E-02
134GO:0006464: cellular protein modification process1.90E-02
135GO:0009611: response to wounding2.07E-02
136GO:0009627: systemic acquired resistance2.33E-02
137GO:0042128: nitrate assimilation2.33E-02
138GO:0015995: chlorophyll biosynthetic process2.42E-02
139GO:0010411: xyloglucan metabolic process2.42E-02
140GO:0008219: cell death2.61E-02
141GO:0009817: defense response to fungus, incompatible interaction2.61E-02
142GO:0010311: lateral root formation2.70E-02
143GO:0009813: flavonoid biosynthetic process2.70E-02
144GO:0055085: transmembrane transport2.72E-02
145GO:0006811: ion transport2.79E-02
146GO:0009407: toxin catabolic process2.79E-02
147GO:0010043: response to zinc ion2.89E-02
148GO:0007568: aging2.89E-02
149GO:0009651: response to salt stress3.07E-02
150GO:0045087: innate immune response3.08E-02
151GO:0009853: photorespiration3.08E-02
152GO:0006631: fatty acid metabolic process3.49E-02
153GO:0042546: cell wall biogenesis3.80E-02
154GO:0031347: regulation of defense response4.23E-02
155GO:0016042: lipid catabolic process4.29E-02
156GO:0006813: potassium ion transport4.57E-02
157GO:0051603: proteolysis involved in cellular protein catabolic process4.68E-02
158GO:0009414: response to water deprivation4.69E-02
159GO:0008152: metabolic process4.86E-02
RankGO TermAdjusted P value
1GO:0032441: pheophorbide a oxygenase activity0.00E+00
2GO:0015205: nucleobase transmembrane transporter activity0.00E+00
3GO:0015391: nucleobase:cation symporter activity0.00E+00
4GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity0.00E+00
5GO:0010176: homogentisate phytyltransferase activity0.00E+00
6GO:0004151: dihydroorotase activity0.00E+00
7GO:0017153: sodium:dicarboxylate symporter activity0.00E+00
8GO:0080109: indole-3-acetonitrile nitrile hydratase activity0.00E+00
9GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
10GO:0047501: (+)-neomenthol dehydrogenase activity0.00E+00
11GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
12GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity0.00E+00
13GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
14GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
15GO:0008734: L-aspartate oxidase activity0.00E+00
16GO:0047504: (-)-menthol dehydrogenase activity0.00E+00
17GO:0050242: pyruvate, phosphate dikinase activity0.00E+00
18GO:0009940: amino-terminal vacuolar sorting propeptide binding0.00E+00
19GO:0000250: lanosterol synthase activity0.00E+00
20GO:0080061: indole-3-acetonitrile nitrilase activity6.65E-09
21GO:0000257: nitrilase activity3.24E-08
22GO:0004557: alpha-galactosidase activity5.12E-06
23GO:0052692: raffinose alpha-galactosidase activity5.12E-06
24GO:0008106: alcohol dehydrogenase (NADP+) activity1.19E-05
25GO:0005507: copper ion binding1.42E-05
26GO:0004301: epoxide hydrolase activity2.20E-05
27GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity5.33E-05
28GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity5.33E-05
29GO:0005261: cation channel activity7.42E-05
30GO:0015446: ATPase-coupled arsenite transmembrane transporter activity1.69E-04
31GO:0071992: phytochelatin transmembrane transporter activity1.69E-04
32GO:0004307: ethanolaminephosphotransferase activity1.69E-04
33GO:0009671: nitrate:proton symporter activity1.69E-04
34GO:0010209: vacuolar sorting signal binding1.69E-04
35GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor1.69E-04
36GO:0016229: steroid dehydrogenase activity1.69E-04
37GO:0045153: electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity1.69E-04
38GO:0004347: glucose-6-phosphate isomerase activity1.69E-04
39GO:0016776: phosphotransferase activity, phosphate group as acceptor1.69E-04
40GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity1.69E-04
41GO:0001530: lipopolysaccharide binding1.69E-04
42GO:0016780: phosphotransferase activity, for other substituted phosphate groups1.69E-04
43GO:0045437: uridine nucleosidase activity1.69E-04
44GO:0070401: NADP+ binding1.69E-04
45GO:0008066: glutamate receptor activity1.69E-04
46GO:0030170: pyridoxal phosphate binding2.94E-04
47GO:0008559: xenobiotic-transporting ATPase activity3.19E-04
48GO:0004614: phosphoglucomutase activity3.83E-04
49GO:0030572: phosphatidyltransferase activity3.83E-04
50GO:0004142: diacylglycerol cholinephosphotransferase activity3.83E-04
51GO:0005366: myo-inositol:proton symporter activity3.83E-04
52GO:0004566: beta-glucuronidase activity3.83E-04
53GO:0015179: L-amino acid transmembrane transporter activity3.83E-04
54GO:0004047: aminomethyltransferase activity3.83E-04
55GO:0047724: inosine nucleosidase activity3.83E-04
56GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding3.83E-04
57GO:0047517: 1,4-beta-D-xylan synthase activity3.83E-04
58GO:0016491: oxidoreductase activity4.66E-04
59GO:0030552: cAMP binding5.27E-04
60GO:0004867: serine-type endopeptidase inhibitor activity5.27E-04
61GO:0030553: cGMP binding5.27E-04
62GO:0004781: sulfate adenylyltransferase (ATP) activity6.25E-04
63GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding6.25E-04
64GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity6.25E-04
65GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity6.25E-04
66GO:0010277: chlorophyllide a oxygenase [overall] activity6.25E-04
67GO:0008324: cation transmembrane transporter activity7.14E-04
68GO:0005216: ion channel activity7.14E-04
69GO:0016788: hydrolase activity, acting on ester bonds8.36E-04
70GO:0015203: polyamine transmembrane transporter activity8.93E-04
71GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity8.93E-04
72GO:0005249: voltage-gated potassium channel activity1.17E-03
73GO:0030551: cyclic nucleotide binding1.17E-03
74GO:0009044: xylan 1,4-beta-xylosidase activity1.18E-03
75GO:0050302: indole-3-acetaldehyde oxidase activity1.18E-03
76GO:0005253: anion channel activity1.18E-03
77GO:0016866: intramolecular transferase activity1.18E-03
78GO:0004659: prenyltransferase activity1.18E-03
79GO:0080032: methyl jasmonate esterase activity1.18E-03
80GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.18E-03
81GO:0016787: hydrolase activity1.36E-03
82GO:0008177: succinate dehydrogenase (ubiquinone) activity1.50E-03
83GO:0004356: glutamate-ammonia ligase activity1.50E-03
84GO:0004462: lactoylglutathione lyase activity1.85E-03
85GO:0016615: malate dehydrogenase activity1.85E-03
86GO:0005247: voltage-gated chloride channel activity1.85E-03
87GO:0080030: methyl indole-3-acetate esterase activity1.85E-03
88GO:0016161: beta-amylase activity2.22E-03
89GO:0030060: L-malate dehydrogenase activity2.22E-03
90GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.22E-03
91GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.22E-03
92GO:0015140: malate transmembrane transporter activity2.61E-03
93GO:0016798: hydrolase activity, acting on glycosyl bonds2.61E-03
94GO:0004033: aldo-keto reductase (NADP) activity3.02E-03
95GO:0004869: cysteine-type endopeptidase inhibitor activity3.02E-03
96GO:0008271: secondary active sulfate transmembrane transporter activity3.46E-03
97GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.65E-03
98GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity4.38E-03
99GO:0015174: basic amino acid transmembrane transporter activity4.38E-03
100GO:0015293: symporter activity5.27E-03
101GO:0052716: hydroquinone:oxygen oxidoreductase activity5.91E-03
102GO:0015116: sulfate transmembrane transporter activity5.91E-03
103GO:0004022: alcohol dehydrogenase (NAD) activity6.46E-03
104GO:0005262: calcium channel activity6.46E-03
105GO:0016298: lipase activity6.54E-03
106GO:0052689: carboxylic ester hydrolase activity6.73E-03
107GO:0004970: ionotropic glutamate receptor activity7.60E-03
108GO:0005217: intracellular ligand-gated ion channel activity7.60E-03
109GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups7.72E-03
110GO:0051536: iron-sulfur cluster binding8.81E-03
111GO:0005516: calmodulin binding8.96E-03
112GO:0035251: UDP-glucosyltransferase activity1.01E-02
113GO:0009055: electron carrier activity1.06E-02
114GO:0004527: exonuclease activity1.43E-02
115GO:0015297: antiporter activity1.49E-02
116GO:0005355: glucose transmembrane transporter activity1.51E-02
117GO:0016762: xyloglucan:xyloglucosyl transferase activity1.66E-02
118GO:0008137: NADH dehydrogenase (ubiquinone) activity1.66E-02
119GO:0004197: cysteine-type endopeptidase activity1.74E-02
120GO:0046872: metal ion binding1.79E-02
121GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.99E-02
122GO:0008483: transaminase activity1.99E-02
123GO:0016722: oxidoreductase activity, oxidizing metal ions1.99E-02
124GO:0051213: dioxygenase activity2.16E-02
125GO:0008236: serine-type peptidase activity2.51E-02
126GO:0015238: drug transmembrane transporter activity2.70E-02
127GO:0008270: zinc ion binding2.80E-02
128GO:0050897: cobalt ion binding2.89E-02
129GO:0050661: NADP binding3.38E-02
130GO:0004364: glutathione transferase activity3.59E-02
131GO:0004185: serine-type carboxypeptidase activity3.69E-02
132GO:0042803: protein homodimerization activity3.76E-02
133GO:0051537: 2 iron, 2 sulfur cluster binding3.91E-02
134GO:0051287: NAD binding4.23E-02
135GO:0005509: calcium ion binding4.37E-02
136GO:0031625: ubiquitin protein ligase binding4.91E-02
137GO:0008234: cysteine-type peptidase activity4.91E-02
RankGO TermAdjusted P value
1GO:0005759: mitochondrial matrix2.61E-06
2GO:0005773: vacuole5.59E-06
3GO:0048046: apoplast2.77E-05
4GO:0005829: cytosol3.21E-05
5GO:0005578: proteinaceous extracellular matrix4.18E-04
6GO:0005758: mitochondrial intermembrane space6.49E-04
7GO:0005887: integral component of plasma membrane6.96E-04
8GO:0005747: mitochondrial respiratory chain complex I1.08E-03
9GO:0031372: UBC13-MMS2 complex1.18E-03
10GO:0016593: Cdc73/Paf1 complex1.18E-03
11GO:0009526: plastid envelope1.18E-03
12GO:0005774: vacuolar membrane1.26E-03
13GO:0005746: mitochondrial respiratory chain1.50E-03
14GO:0005623: cell1.78E-03
15GO:0010168: ER body1.85E-03
16GO:0034707: chloride channel complex1.85E-03
17GO:0010319: stromule1.98E-03
18GO:0009501: amyloplast3.02E-03
19GO:0045273: respiratory chain complex II3.02E-03
20GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)3.02E-03
21GO:0000325: plant-type vacuole3.33E-03
22GO:0010494: cytoplasmic stress granule3.91E-03
23GO:0030665: clathrin-coated vesicle membrane4.38E-03
24GO:0017119: Golgi transport complex4.87E-03
25GO:0005884: actin filament5.38E-03
26GO:0005765: lysosomal membrane5.38E-03
27GO:0031969: chloroplast membrane5.93E-03
28GO:0031012: extracellular matrix6.46E-03
29GO:0005886: plasma membrane6.80E-03
30GO:0005750: mitochondrial respiratory chain complex III7.02E-03
31GO:0005764: lysosome7.02E-03
32GO:0045271: respiratory chain complex I9.44E-03
33GO:0070469: respiratory chain9.44E-03
34GO:0005576: extracellular region1.24E-02
35GO:0005770: late endosome1.43E-02
36GO:0005618: cell wall1.49E-02
37GO:0009705: plant-type vacuole membrane1.56E-02
38GO:0005615: extracellular space1.75E-02
39GO:0009505: plant-type cell wall1.97E-02
40GO:0000932: P-body2.16E-02
41GO:0005737: cytoplasm2.27E-02
42GO:0019005: SCF ubiquitin ligase complex2.61E-02
43GO:0031902: late endosome membrane3.49E-02
44GO:0090406: pollen tube3.69E-02
45GO:0005622: intracellular4.12E-02
46GO:0005783: endoplasmic reticulum4.27E-02
47GO:0031966: mitochondrial membrane4.34E-02
48GO:0009507: chloroplast4.52E-02
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Gene type



Gene DE type