GO Enrichment Analysis of Co-expressed Genes with
AT3G23390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007530: sex determination | 0.00E+00 |
| 2 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 3 | GO:0006412: translation | 6.39E-112 |
| 4 | GO:0042254: ribosome biogenesis | 3.74E-46 |
| 5 | GO:0000027: ribosomal large subunit assembly | 2.02E-10 |
| 6 | GO:0000028: ribosomal small subunit assembly | 2.35E-08 |
| 7 | GO:1902626: assembly of large subunit precursor of preribosome | 7.24E-06 |
| 8 | GO:0000387: spliceosomal snRNP assembly | 8.42E-06 |
| 9 | GO:0006626: protein targeting to mitochondrion | 2.28E-05 |
| 10 | GO:0009955: adaxial/abaxial pattern specification | 1.00E-04 |
| 11 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.04E-04 |
| 12 | GO:1990258: histone glutamine methylation | 2.04E-04 |
| 13 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 2.04E-04 |
| 14 | GO:0006407: rRNA export from nucleus | 2.04E-04 |
| 15 | GO:0006475: internal protein amino acid acetylation | 2.04E-04 |
| 16 | GO:0015801: aromatic amino acid transport | 2.04E-04 |
| 17 | GO:0017198: N-terminal peptidyl-serine acetylation | 2.04E-04 |
| 18 | GO:0030490: maturation of SSU-rRNA | 2.04E-04 |
| 19 | GO:0000494: box C/D snoRNA 3'-end processing | 2.04E-04 |
| 20 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.04E-04 |
| 21 | GO:0045905: positive regulation of translational termination | 4.57E-04 |
| 22 | GO:0045901: positive regulation of translational elongation | 4.57E-04 |
| 23 | GO:0045041: protein import into mitochondrial intermembrane space | 4.57E-04 |
| 24 | GO:0006452: translational frameshifting | 4.57E-04 |
| 25 | GO:0010198: synergid death | 4.57E-04 |
| 26 | GO:0002181: cytoplasmic translation | 7.44E-04 |
| 27 | GO:0042256: mature ribosome assembly | 7.44E-04 |
| 28 | GO:0006241: CTP biosynthetic process | 1.06E-03 |
| 29 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.06E-03 |
| 30 | GO:0006165: nucleoside diphosphate phosphorylation | 1.06E-03 |
| 31 | GO:0006228: UTP biosynthetic process | 1.06E-03 |
| 32 | GO:0009558: embryo sac cellularization | 1.06E-03 |
| 33 | GO:0070301: cellular response to hydrogen peroxide | 1.06E-03 |
| 34 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.06E-03 |
| 35 | GO:0006183: GTP biosynthetic process | 1.41E-03 |
| 36 | GO:0031167: rRNA methylation | 1.80E-03 |
| 37 | GO:0000398: mRNA splicing, via spliceosome | 2.19E-03 |
| 38 | GO:0045040: protein import into mitochondrial outer membrane | 2.21E-03 |
| 39 | GO:0042026: protein refolding | 2.66E-03 |
| 40 | GO:0006458: 'de novo' protein folding | 2.66E-03 |
| 41 | GO:0006413: translational initiation | 3.33E-03 |
| 42 | GO:0001510: RNA methylation | 4.15E-03 |
| 43 | GO:0008380: RNA splicing | 4.57E-03 |
| 44 | GO:0009245: lipid A biosynthetic process | 4.70E-03 |
| 45 | GO:0048589: developmental growth | 4.70E-03 |
| 46 | GO:0010267: production of ta-siRNAs involved in RNA interference | 5.27E-03 |
| 47 | GO:0008283: cell proliferation | 6.13E-03 |
| 48 | GO:0009735: response to cytokinin | 6.34E-03 |
| 49 | GO:0006913: nucleocytoplasmic transport | 6.48E-03 |
| 50 | GO:0010015: root morphogenesis | 6.48E-03 |
| 51 | GO:0009965: leaf morphogenesis | 6.89E-03 |
| 52 | GO:0016925: protein sumoylation | 7.12E-03 |
| 53 | GO:0010102: lateral root morphogenesis | 7.78E-03 |
| 54 | GO:0010628: positive regulation of gene expression | 7.78E-03 |
| 55 | GO:0006446: regulation of translational initiation | 8.47E-03 |
| 56 | GO:0048467: gynoecium development | 8.47E-03 |
| 57 | GO:0009793: embryo development ending in seed dormancy | 8.89E-03 |
| 58 | GO:0030150: protein import into mitochondrial matrix | 1.06E-02 |
| 59 | GO:0006406: mRNA export from nucleus | 1.06E-02 |
| 60 | GO:0003333: amino acid transmembrane transport | 1.22E-02 |
| 61 | GO:0061077: chaperone-mediated protein folding | 1.22E-02 |
| 62 | GO:0007005: mitochondrion organization | 1.30E-02 |
| 63 | GO:0006414: translational elongation | 1.33E-02 |
| 64 | GO:0006397: mRNA processing | 1.45E-02 |
| 65 | GO:0010089: xylem development | 1.47E-02 |
| 66 | GO:0008033: tRNA processing | 1.64E-02 |
| 67 | GO:0010197: polar nucleus fusion | 1.73E-02 |
| 68 | GO:0009651: response to salt stress | 1.82E-02 |
| 69 | GO:0010183: pollen tube guidance | 1.92E-02 |
| 70 | GO:0031047: gene silencing by RNA | 2.11E-02 |
| 71 | GO:0006464: cellular protein modification process | 2.30E-02 |
| 72 | GO:0010286: heat acclimation | 2.41E-02 |
| 73 | GO:0006865: amino acid transport | 3.62E-02 |
| 74 | GO:0009644: response to high light intensity | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 1.21E-132 |
| 2 | GO:0003729: mRNA binding | 2.65E-29 |
| 3 | GO:0019843: rRNA binding | 2.07E-10 |
| 4 | GO:0008097: 5S rRNA binding | 1.66E-05 |
| 5 | GO:0043022: ribosome binding | 1.70E-04 |
| 6 | GO:1990189: peptide-serine-N-acetyltransferase activity | 2.04E-04 |
| 7 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 2.04E-04 |
| 8 | GO:1990259: histone-glutamine methyltransferase activity | 2.04E-04 |
| 9 | GO:0044183: protein binding involved in protein folding | 4.16E-04 |
| 10 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.35E-04 |
| 11 | GO:0015173: aromatic amino acid transmembrane transporter activity | 4.57E-04 |
| 12 | GO:0008649: rRNA methyltransferase activity | 7.44E-04 |
| 13 | GO:0004550: nucleoside diphosphate kinase activity | 1.06E-03 |
| 14 | GO:0005275: amine transmembrane transporter activity | 1.80E-03 |
| 15 | GO:0031386: protein tag | 1.80E-03 |
| 16 | GO:0051082: unfolded protein binding | 1.82E-03 |
| 17 | GO:0031177: phosphopantetheine binding | 2.21E-03 |
| 18 | GO:0003723: RNA binding | 2.60E-03 |
| 19 | GO:0000035: acyl binding | 2.66E-03 |
| 20 | GO:0030515: snoRNA binding | 3.13E-03 |
| 21 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 3.63E-03 |
| 22 | GO:0003743: translation initiation factor activity | 4.44E-03 |
| 23 | GO:0001055: RNA polymerase II activity | 5.27E-03 |
| 24 | GO:0001054: RNA polymerase I activity | 6.48E-03 |
| 25 | GO:0001056: RNA polymerase III activity | 7.12E-03 |
| 26 | GO:0015266: protein channel activity | 7.78E-03 |
| 27 | GO:0031072: heat shock protein binding | 7.78E-03 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.27E-03 |
| 29 | GO:0008080: N-acetyltransferase activity | 1.73E-02 |
| 30 | GO:0050897: cobalt ion binding | 3.50E-02 |
| 31 | GO:0003746: translation elongation factor activity | 3.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005840: ribosome | 1.09E-100 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 2.57E-82 |
| 4 | GO:0022626: cytosolic ribosome | 3.72E-76 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 1.16E-53 |
| 6 | GO:0005737: cytoplasm | 3.10E-31 |
| 7 | GO:0005730: nucleolus | 2.09E-24 |
| 8 | GO:0005829: cytosol | 4.02E-20 |
| 9 | GO:0009506: plasmodesma | 1.29E-13 |
| 10 | GO:0005774: vacuolar membrane | 8.19E-10 |
| 11 | GO:0016020: membrane | 1.67E-08 |
| 12 | GO:0015934: large ribosomal subunit | 6.29E-08 |
| 13 | GO:0015935: small ribosomal subunit | 1.85E-06 |
| 14 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.93E-06 |
| 15 | GO:0019013: viral nucleocapsid | 2.28E-05 |
| 16 | GO:0005618: cell wall | 2.67E-05 |
| 17 | GO:0030686: 90S preribosome | 2.04E-04 |
| 18 | GO:0005742: mitochondrial outer membrane translocase complex | 2.11E-04 |
| 19 | GO:0071011: precatalytic spliceosome | 3.06E-04 |
| 20 | GO:0005773: vacuole | 3.08E-04 |
| 21 | GO:0071013: catalytic step 2 spliceosome | 4.16E-04 |
| 22 | GO:0035145: exon-exon junction complex | 4.57E-04 |
| 23 | GO:0031415: NatA complex | 4.57E-04 |
| 24 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.78E-04 |
| 25 | GO:0034719: SMN-Sm protein complex | 7.44E-04 |
| 26 | GO:0000419: DNA-directed RNA polymerase V complex | 7.58E-04 |
| 27 | GO:0005758: mitochondrial intermembrane space | 8.38E-04 |
| 28 | GO:1990726: Lsm1-7-Pat1 complex | 1.06E-03 |
| 29 | GO:0005682: U5 snRNP | 1.41E-03 |
| 30 | GO:0000445: THO complex part of transcription export complex | 1.41E-03 |
| 31 | GO:0005681: spliceosomal complex | 1.44E-03 |
| 32 | GO:0005687: U4 snRNP | 1.80E-03 |
| 33 | GO:0097526: spliceosomal tri-snRNP complex | 1.80E-03 |
| 34 | GO:0031428: box C/D snoRNP complex | 2.21E-03 |
| 35 | GO:0005689: U12-type spliceosomal complex | 2.66E-03 |
| 36 | GO:0016272: prefoldin complex | 2.66E-03 |
| 37 | GO:0000347: THO complex | 3.13E-03 |
| 38 | GO:0071004: U2-type prespliceosome | 3.63E-03 |
| 39 | GO:0005688: U6 snRNP | 3.63E-03 |
| 40 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 4.15E-03 |
| 41 | GO:0005685: U1 snRNP | 4.70E-03 |
| 42 | GO:0005736: DNA-directed RNA polymerase I complex | 4.70E-03 |
| 43 | GO:0005666: DNA-directed RNA polymerase III complex | 5.27E-03 |
| 44 | GO:0015030: Cajal body | 5.27E-03 |
| 45 | GO:0005686: U2 snRNP | 5.86E-03 |
| 46 | GO:0000418: DNA-directed RNA polymerase IV complex | 5.86E-03 |
| 47 | GO:0005852: eukaryotic translation initiation factor 3 complex | 6.48E-03 |
| 48 | GO:0031307: integral component of mitochondrial outer membrane | 7.12E-03 |
| 49 | GO:0032040: small-subunit processome | 7.12E-03 |
| 50 | GO:0005886: plasma membrane | 9.76E-03 |
| 51 | GO:0070469: respiratory chain | 1.14E-02 |
| 52 | GO:0000932: P-body | 2.61E-02 |