co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0023052: signaling	0.00E+00
2	GO:0015746: citrate transport	0.00E+00
3	GO:0042430: indole-containing compound metabolic process	0.00E+00
4	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
5	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
6	GO:0006721: terpenoid metabolic process	0.00E+00
7	GO:0009236: cobalamin biosynthetic process	0.00E+00
8	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
9	GO:0042908: xenobiotic transport	0.00E+00
10	GO:0001881: receptor recycling	0.00E+00
11	GO:0006592: ornithine biosynthetic process	0.00E+00
12	GO:0018293: protein-FAD linkage	0.00E+00
13	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
14	GO:0006099: tricarboxylic acid cycle	1.25E-07
15	GO:0055114: oxidation-reduction process	4.43E-06
16	GO:0009963: positive regulation of flavonoid biosynthetic process	1.83E-05
17	GO:0009853: photorespiration	6.14E-05
18	GO:0006855: drug transmembrane transport	1.30E-04
19	GO:0010044: response to aluminum ion	1.45E-04
20	GO:0031539: positive regulation of anthocyanin metabolic process	2.16E-04
21	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	2.16E-04
22	GO:0010265: SCF complex assembly	2.16E-04
23	GO:0015798: myo-inositol transport	2.16E-04
24	GO:0019354: siroheme biosynthetic process	2.16E-04
25	GO:0016487: farnesol metabolic process	2.16E-04
26	GO:0097054: L-glutamate biosynthetic process	4.81E-04
27	GO:0046939: nucleotide phosphorylation	4.81E-04
28	GO:0019222: regulation of metabolic process	4.81E-04
29	GO:0009915: phloem sucrose loading	4.81E-04
30	GO:0045454: cell redox homeostasis	5.17E-04
31	GO:0006108: malate metabolic process	5.83E-04
32	GO:0006006: glucose metabolic process	5.83E-04
33	GO:0007034: vacuolar transport	6.57E-04
34	GO:0008333: endosome to lysosome transport	7.83E-04
35	GO:0015940: pantothenate biosynthetic process	7.83E-04
36	GO:0045793: positive regulation of cell size	7.83E-04
37	GO:0009651: response to salt stress	9.32E-04
38	GO:0006537: glutamate biosynthetic process	1.12E-03
39	GO:1901332: negative regulation of lateral root development	1.12E-03
40	GO:0015700: arsenite transport	1.12E-03
41	GO:0006168: adenine salvage	1.12E-03
42	GO:0032877: positive regulation of DNA endoreduplication	1.12E-03
43	GO:0006166: purine ribonucleoside salvage	1.12E-03
44	GO:0006107: oxaloacetate metabolic process	1.12E-03
45	GO:0010017: red or far-red light signaling pathway	1.18E-03
46	GO:0032366: intracellular sterol transport	1.48E-03
47	GO:0006646: phosphatidylethanolamine biosynthetic process	1.48E-03
48	GO:0019676: ammonia assimilation cycle	1.48E-03
49	GO:0051781: positive regulation of cell division	1.48E-03
50	GO:0051365: cellular response to potassium ion starvation	1.48E-03
51	GO:0010387: COP9 signalosome assembly	1.48E-03
52	GO:0080022: primary root development	1.63E-03
53	GO:0005513: detection of calcium ion	1.89E-03
54	GO:0015986: ATP synthesis coupled proton transport	1.89E-03
55	GO:0044209: AMP salvage	1.89E-03
56	GO:0009435: NAD biosynthetic process	1.89E-03
57	GO:0006623: protein targeting to vacuole	2.03E-03
58	GO:0003006: developmental process involved in reproduction	2.33E-03
59	GO:0002238: response to molecule of fungal origin	2.33E-03
60	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	2.33E-03
61	GO:0006555: methionine metabolic process	2.33E-03
62	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.80E-03
63	GO:0010189: vitamin E biosynthetic process	2.80E-03
64	GO:0019509: L-methionine salvage from methylthioadenosine	2.80E-03
65	GO:1901001: negative regulation of response to salt stress	2.80E-03
66	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.80E-03
67	GO:0009615: response to virus	3.12E-03
68	GO:0050790: regulation of catalytic activity	3.30E-03
69	GO:0080027: response to herbivore	3.30E-03
70	GO:0000338: protein deneddylation	3.30E-03
71	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.82E-03
72	GO:0009642: response to light intensity	3.82E-03
73	GO:0009690: cytokinin metabolic process	3.82E-03
74	GO:0006506: GPI anchor biosynthetic process	3.82E-03
75	GO:0048658: anther wall tapetum development	3.82E-03
76	GO:0006102: isocitrate metabolic process	3.82E-03
77	GO:0009817: defense response to fungus, incompatible interaction	4.06E-03
78	GO:0006526: arginine biosynthetic process	4.38E-03
79	GO:0010099: regulation of photomorphogenesis	4.38E-03
80	GO:0009821: alkaloid biosynthetic process	4.95E-03
81	GO:0080144: amino acid homeostasis	4.95E-03
82	GO:0046685: response to arsenic-containing substance	4.95E-03
83	GO:0006896: Golgi to vacuole transport	6.18E-03
84	GO:0006995: cellular response to nitrogen starvation	6.18E-03
85	GO:0000103: sulfate assimilation	6.18E-03
86	GO:0006032: chitin catabolic process	6.18E-03
87	GO:0043069: negative regulation of programmed cell death	6.18E-03
88	GO:0009640: photomorphogenesis	6.63E-03
89	GO:0052544: defense response by callose deposition in cell wall	6.84E-03
90	GO:0000272: polysaccharide catabolic process	6.84E-03
91	GO:0009735: response to cytokinin	7.14E-03
92	GO:0002213: defense response to insect	7.51E-03
93	GO:0012501: programmed cell death	7.51E-03
94	GO:0006807: nitrogen compound metabolic process	8.22E-03
95	GO:0050826: response to freezing	8.22E-03
96	GO:0006094: gluconeogenesis	8.22E-03
97	GO:0002237: response to molecule of bacterial origin	8.94E-03
98	GO:0009585: red, far-red light phototransduction	8.94E-03
99	GO:0010223: secondary shoot formation	8.94E-03
100	GO:0009266: response to temperature stimulus	8.94E-03
101	GO:0009934: regulation of meristem structural organization	8.94E-03
102	GO:0051603: proteolysis involved in cellular protein catabolic process	9.26E-03
103	GO:0019853: L-ascorbic acid biosynthetic process	9.69E-03
104	GO:0010039: response to iron ion	9.69E-03
105	GO:0044550: secondary metabolite biosynthetic process	1.03E-02
106	GO:0034976: response to endoplasmic reticulum stress	1.05E-02
107	GO:0042753: positive regulation of circadian rhythm	1.05E-02
108	GO:0006636: unsaturated fatty acid biosynthetic process	1.05E-02
109	GO:0006071: glycerol metabolic process	1.05E-02
110	GO:0006096: glycolytic process	1.06E-02
111	GO:0006487: protein N-linked glycosylation	1.12E-02
112	GO:0009116: nucleoside metabolic process	1.12E-02
113	GO:0055085: transmembrane transport	1.17E-02
114	GO:0006825: copper ion transport	1.21E-02
115	GO:0019953: sexual reproduction	1.21E-02
116	GO:0009624: response to nematode	1.28E-02
117	GO:0048511: rhythmic process	1.29E-02
118	GO:0035428: hexose transmembrane transport	1.37E-02
119	GO:0019748: secondary metabolic process	1.37E-02
120	GO:0009625: response to insect	1.46E-02
121	GO:0019722: calcium-mediated signaling	1.55E-02
122	GO:0016117: carotenoid biosynthetic process	1.64E-02
123	GO:0042147: retrograde transport, endosome to Golgi	1.64E-02
124	GO:0009753: response to jasmonic acid	1.65E-02
125	GO:0034220: ion transmembrane transport	1.74E-02
126	GO:0010051: xylem and phloem pattern formation	1.74E-02
127	GO:0010118: stomatal movement	1.74E-02
128	GO:0042631: cellular response to water deprivation	1.74E-02
129	GO:0042744: hydrogen peroxide catabolic process	1.82E-02
130	GO:0009958: positive gravitropism	1.83E-02
131	GO:0006662: glycerol ether metabolic process	1.83E-02
132	GO:0046323: glucose import	1.83E-02
133	GO:0008654: phospholipid biosynthetic process	2.02E-02
134	GO:0055072: iron ion homeostasis	2.02E-02
135	GO:0010228: vegetative to reproductive phase transition of meristem	2.32E-02
136	GO:0042742: defense response to bacterium	2.36E-02
137	GO:0006979: response to oxidative stress	2.39E-02
138	GO:0009828: plant-type cell wall loosening	2.44E-02
139	GO:0000910: cytokinesis	2.65E-02
140	GO:0009733: response to auxin	2.80E-02
141	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.87E-02
142	GO:0009627: systemic acquired resistance	2.99E-02
143	GO:0006950: response to stress	3.10E-02
144	GO:0009611: response to wounding	3.20E-02
145	GO:0009826: unidimensional cell growth	3.29E-02
146	GO:0010311: lateral root formation	3.46E-02
147	GO:0006499: N-terminal protein myristoylation	3.58E-02
148	GO:0006811: ion transport	3.58E-02
149	GO:0010218: response to far red light	3.58E-02
150	GO:0006970: response to osmotic stress	3.68E-02
151	GO:0009631: cold acclimation	3.70E-02
152	GO:0007568: aging	3.70E-02
153	GO:0009723: response to ethylene	3.95E-02
154	GO:0034599: cellular response to oxidative stress	4.07E-02
155	GO:0080167: response to karrikin	4.23E-02
156	GO:0006631: fatty acid metabolic process	4.46E-02
157	GO:0042542: response to hydrogen peroxide	4.59E-02
158	GO:0010114: response to red light	4.73E-02
159	GO:0009926: auxin polar transport	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0015930: glutamate synthase activity	0.00E+00
2	GO:0051266: sirohydrochlorin ferrochelatase activity	0.00E+00
3	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
4	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
5	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
6	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
7	GO:0003796: lysozyme activity	0.00E+00
8	GO:0047886: farnesol dehydrogenase activity	0.00E+00
9	GO:0008777: acetylornithine deacetylase activity	0.00E+00
10	GO:0016852: sirohydrochlorin cobaltochelatase activity	0.00E+00
11	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
12	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
13	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
14	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
15	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
16	GO:0008734: L-aspartate oxidase activity	0.00E+00
17	GO:0050152: omega-amidase activity	0.00E+00
18	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
19	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.05E-05
20	GO:0008794: arsenate reductase (glutaredoxin) activity	1.64E-05
21	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	2.16E-04
22	GO:0080047: GDP-L-galactose phosphorylase activity	2.16E-04
23	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.16E-04
24	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.16E-04
25	GO:0071992: phytochelatin transmembrane transporter activity	2.16E-04
26	GO:0004307: ethanolaminephosphotransferase activity	2.16E-04
27	GO:0010209: vacuolar sorting signal binding	2.16E-04
28	GO:0016041: glutamate synthase (ferredoxin) activity	2.16E-04
29	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	2.16E-04
30	GO:0080048: GDP-D-glucose phosphorylase activity	2.16E-04
31	GO:0004347: glucose-6-phosphate isomerase activity	2.16E-04
32	GO:0015137: citrate transmembrane transporter activity	2.16E-04
33	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	2.16E-04
34	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	2.16E-04
35	GO:0015035: protein disulfide oxidoreductase activity	3.17E-04
36	GO:0004129: cytochrome-c oxidase activity	4.49E-04
37	GO:0008559: xenobiotic-transporting ATPase activity	4.49E-04
38	GO:0030572: phosphatidyltransferase activity	4.81E-04
39	GO:0004142: diacylglycerol cholinephosphotransferase activity	4.81E-04
40	GO:0051980: iron-nicotianamine transmembrane transporter activity	4.81E-04
41	GO:0005366: myo-inositol:proton symporter activity	4.81E-04
42	GO:0008517: folic acid transporter activity	4.81E-04
43	GO:0004566: beta-glucuronidase activity	4.81E-04
44	GO:0050897: cobalt ion binding	5.77E-04
45	GO:0051539: 4 iron, 4 sulfur cluster binding	7.64E-04
46	GO:0004557: alpha-galactosidase activity	7.83E-04
47	GO:0016805: dipeptidase activity	7.83E-04
48	GO:0052692: raffinose alpha-galactosidase activity	7.83E-04
49	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	7.83E-04
50	GO:0016531: copper chaperone activity	7.83E-04
51	GO:0003999: adenine phosphoribosyltransferase activity	1.12E-03
52	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.12E-03
53	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.12E-03
54	GO:0019201: nucleotide kinase activity	1.12E-03
55	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.48E-03
56	GO:0004576: oligosaccharyl transferase activity	1.48E-03
57	GO:0004301: epoxide hydrolase activity	1.48E-03
58	GO:0004659: prenyltransferase activity	1.48E-03
59	GO:0010011: auxin binding	1.48E-03
60	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.76E-03
61	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.89E-03
62	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.89E-03
63	GO:0004040: amidase activity	1.89E-03
64	GO:0051538: 3 iron, 4 sulfur cluster binding	1.89E-03
65	GO:0016615: malate dehydrogenase activity	2.33E-03
66	GO:0004866: endopeptidase inhibitor activity	2.33E-03
67	GO:0080046: quercetin 4'-O-glucosyltransferase activity	2.33E-03
68	GO:0004017: adenylate kinase activity	2.80E-03
69	GO:0030060: L-malate dehydrogenase activity	2.80E-03
70	GO:0005085: guanyl-nucleotide exchange factor activity	3.30E-03
71	GO:0008235: metalloexopeptidase activity	3.30E-03
72	GO:0009055: electron carrier activity	3.81E-03
73	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.82E-03
74	GO:0015238: drug transmembrane transporter activity	4.27E-03
75	GO:0015078: hydrogen ion transmembrane transporter activity	4.38E-03
76	GO:0020037: heme binding	4.91E-03
77	GO:0008889: glycerophosphodiester phosphodiesterase activity	4.95E-03
78	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.46E-03
79	GO:0045309: protein phosphorylated amino acid binding	5.56E-03
80	GO:0016844: strictosidine synthase activity	5.56E-03
81	GO:0004568: chitinase activity	6.18E-03
82	GO:0019904: protein domain specific binding	6.84E-03
83	GO:0004177: aminopeptidase activity	6.84E-03
84	GO:0015198: oligopeptide transporter activity	7.51E-03
85	GO:0051287: NAD binding	8.03E-03
86	GO:0004022: alcohol dehydrogenase (NAD) activity	8.22E-03
87	GO:0004089: carbonate dehydratase activity	8.22E-03
88	GO:0008061: chitin binding	9.69E-03
89	GO:0003712: transcription cofactor activity	9.69E-03
90	GO:0051536: iron-sulfur cluster binding	1.12E-02
91	GO:0016491: oxidoreductase activity	1.13E-02
92	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.28E-02
93	GO:0004298: threonine-type endopeptidase activity	1.29E-02
94	GO:0004540: ribonuclease activity	1.29E-02
95	GO:0005507: copper ion binding	1.40E-02
96	GO:0019825: oxygen binding	1.40E-02
97	GO:0003756: protein disulfide isomerase activity	1.55E-02
98	GO:0047134: protein-disulfide reductase activity	1.64E-02
99	GO:0005355: glucose transmembrane transporter activity	1.93E-02
100	GO:0050662: coenzyme binding	1.93E-02
101	GO:0004791: thioredoxin-disulfide reductase activity	1.93E-02
102	GO:0004872: receptor activity	2.02E-02
103	GO:0015297: antiporter activity	2.11E-02
104	GO:0004197: cysteine-type endopeptidase activity	2.23E-02
105	GO:0005506: iron ion binding	2.31E-02
106	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.33E-02
107	GO:0008237: metallopeptidase activity	2.54E-02
108	GO:0016787: hydrolase activity	2.60E-02
109	GO:0015250: water channel activity	2.76E-02
110	GO:0030247: polysaccharide binding	3.10E-02
111	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.10E-02
112	GO:0004601: peroxidase activity	3.42E-02
113	GO:0016788: hydrolase activity, acting on ester bonds	3.49E-02
114	GO:0004222: metalloendopeptidase activity	3.58E-02
115	GO:0030145: manganese ion binding	3.70E-02
116	GO:0008422: beta-glucosidase activity	4.20E-02
117	GO:0050661: NADP binding	4.33E-02
118	GO:0004364: glutathione transferase activity	4.59E-02
119	GO:0004185: serine-type carboxypeptidase activity	4.73E-02
120	GO:0046872: metal ion binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0000274: mitochondrial proton-transporting ATP synthase, stator stalk	0.00E+00
2	GO:0005773: vacuole	6.16E-10
3	GO:0005747: mitochondrial respiratory chain complex I	1.67E-09
4	GO:0045271: respiratory chain complex I	1.76E-06
5	GO:0045273: respiratory chain complex II	3.46E-06
6	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.46E-06
7	GO:0031966: mitochondrial membrane	1.48E-04
8	GO:0000325: plant-type vacuole	5.77E-04
9	GO:0005753: mitochondrial proton-transporting ATP synthase complex	7.34E-04
10	GO:0005751: mitochondrial respiratory chain complex IV	7.83E-04
11	GO:0005758: mitochondrial intermembrane space	9.02E-04
12	GO:0005783: endoplasmic reticulum	9.09E-04
13	GO:0005774: vacuolar membrane	1.01E-03
14	GO:0000276: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	1.12E-03
15	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.48E-03
16	GO:0008250: oligosaccharyltransferase complex	1.89E-03
17	GO:0055035: plastid thylakoid membrane	1.89E-03
18	GO:0005771: multivesicular body	2.33E-03
19	GO:0030904: retromer complex	2.33E-03
20	GO:0008180: COP9 signalosome	4.95E-03
21	GO:0031090: organelle membrane	4.95E-03
22	GO:0030665: clathrin-coated vesicle membrane	5.56E-03
23	GO:0031902: late endosome membrane	6.11E-03
24	GO:0017119: Golgi transport complex	6.18E-03
25	GO:0016020: membrane	6.44E-03
26	GO:0005765: lysosomal membrane	6.84E-03
27	GO:0005750: mitochondrial respiratory chain complex III	8.94E-03
28	GO:0005764: lysosome	8.94E-03
29	GO:0005829: cytosol	9.26E-03
30	GO:0070469: respiratory chain	1.21E-02
31	GO:0005839: proteasome core complex	1.29E-02
32	GO:0005794: Golgi apparatus	1.37E-02
33	GO:0005886: plasma membrane	1.47E-02
34	GO:0005770: late endosome	1.83E-02
35	GO:0005739: mitochondrion	2.25E-02
36	GO:0005615: extracellular space	2.47E-02
37	GO:0005788: endoplasmic reticulum lumen	2.87E-02
38	GO:0005618: cell wall	2.88E-02
39	GO:0005576: extracellular region	3.02E-02
40	GO:0009536: plastid	3.19E-02
41	GO:0031969: chloroplast membrane	4.23E-02
42	GO:0090406: pollen tube	4.73E-02