GO Enrichment Analysis of Co-expressed Genes with
AT3G23070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 3 | GO:0009657: plastid organization | 1.85E-05 |
| 4 | GO:0006419: alanyl-tRNA aminoacylation | 4.18E-05 |
| 5 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 4.18E-05 |
| 6 | GO:1904966: positive regulation of vitamin E biosynthetic process | 4.18E-05 |
| 7 | GO:1904964: positive regulation of phytol biosynthetic process | 4.18E-05 |
| 8 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.04E-04 |
| 9 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.04E-04 |
| 10 | GO:0080005: photosystem stoichiometry adjustment | 1.04E-04 |
| 11 | GO:0000256: allantoin catabolic process | 1.04E-04 |
| 12 | GO:0007017: microtubule-based process | 1.07E-04 |
| 13 | GO:0006013: mannose metabolic process | 1.78E-04 |
| 14 | GO:0010136: ureide catabolic process | 1.78E-04 |
| 15 | GO:0010193: response to ozone | 2.53E-04 |
| 16 | GO:0009102: biotin biosynthetic process | 2.63E-04 |
| 17 | GO:0006809: nitric oxide biosynthetic process | 2.63E-04 |
| 18 | GO:0006145: purine nucleobase catabolic process | 2.63E-04 |
| 19 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.63E-04 |
| 20 | GO:0009765: photosynthesis, light harvesting | 3.53E-04 |
| 21 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.53E-04 |
| 22 | GO:0006021: inositol biosynthetic process | 3.53E-04 |
| 23 | GO:0016123: xanthophyll biosynthetic process | 4.50E-04 |
| 24 | GO:0016120: carotene biosynthetic process | 4.50E-04 |
| 25 | GO:0016558: protein import into peroxisome matrix | 4.50E-04 |
| 26 | GO:0046855: inositol phosphate dephosphorylation | 5.51E-04 |
| 27 | GO:1901259: chloroplast rRNA processing | 6.58E-04 |
| 28 | GO:0006400: tRNA modification | 7.69E-04 |
| 29 | GO:0048564: photosystem I assembly | 8.84E-04 |
| 30 | GO:0000373: Group II intron splicing | 1.13E-03 |
| 31 | GO:0006259: DNA metabolic process | 1.39E-03 |
| 32 | GO:0006265: DNA topological change | 1.53E-03 |
| 33 | GO:0006790: sulfur compound metabolic process | 1.67E-03 |
| 34 | GO:0019853: L-ascorbic acid biosynthetic process | 2.13E-03 |
| 35 | GO:0046854: phosphatidylinositol phosphorylation | 2.13E-03 |
| 36 | GO:0006863: purine nucleobase transport | 2.29E-03 |
| 37 | GO:0080147: root hair cell development | 2.46E-03 |
| 38 | GO:0009451: RNA modification | 2.48E-03 |
| 39 | GO:0009793: embryo development ending in seed dormancy | 2.86E-03 |
| 40 | GO:0080092: regulation of pollen tube growth | 2.97E-03 |
| 41 | GO:0016117: carotenoid biosynthetic process | 3.52E-03 |
| 42 | GO:0000413: protein peptidyl-prolyl isomerization | 3.71E-03 |
| 43 | GO:0048868: pollen tube development | 3.91E-03 |
| 44 | GO:0007059: chromosome segregation | 4.11E-03 |
| 45 | GO:0007018: microtubule-based movement | 4.11E-03 |
| 46 | GO:0006635: fatty acid beta-oxidation | 4.51E-03 |
| 47 | GO:0080167: response to karrikin | 4.61E-03 |
| 48 | GO:0010027: thylakoid membrane organization | 5.81E-03 |
| 49 | GO:0018298: protein-chromophore linkage | 6.98E-03 |
| 50 | GO:0046686: response to cadmium ion | 7.97E-03 |
| 51 | GO:0010114: response to red light | 9.82E-03 |
| 52 | GO:0006364: rRNA processing | 1.21E-02 |
| 53 | GO:0009555: pollen development | 1.21E-02 |
| 54 | GO:0010224: response to UV-B | 1.24E-02 |
| 55 | GO:0006417: regulation of translation | 1.30E-02 |
| 56 | GO:0009553: embryo sac development | 1.52E-02 |
| 57 | GO:0006396: RNA processing | 1.59E-02 |
| 58 | GO:0009790: embryo development | 2.03E-02 |
| 59 | GO:0010468: regulation of gene expression | 2.60E-02 |
| 60 | GO:0009658: chloroplast organization | 3.13E-02 |
| 61 | GO:0042254: ribosome biogenesis | 3.17E-02 |
| 62 | GO:0009860: pollen tube growth | 3.30E-02 |
| 63 | GO:0048366: leaf development | 3.52E-02 |
| 64 | GO:0006810: transport | 3.60E-02 |
| 65 | GO:0046777: protein autophosphorylation | 3.83E-02 |
| 66 | GO:0015979: photosynthesis | 4.01E-02 |
| 67 | GO:0045454: cell redox homeostasis | 4.15E-02 |
| 68 | GO:0016042: lipid catabolic process | 4.71E-02 |
| 69 | GO:0006397: mRNA processing | 4.96E-02 |
| 70 | GO:0048364: root development | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 2 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 3 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 4 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 5 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 4.16E-05 |
| 6 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 4.18E-05 |
| 7 | GO:0004451: isocitrate lyase activity | 4.18E-05 |
| 8 | GO:0004813: alanine-tRNA ligase activity | 4.18E-05 |
| 9 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.04E-04 |
| 10 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.04E-04 |
| 11 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.04E-04 |
| 12 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.78E-04 |
| 13 | GO:0004751: ribose-5-phosphate isomerase activity | 1.78E-04 |
| 14 | GO:0009041: uridylate kinase activity | 2.63E-04 |
| 15 | GO:0043495: protein anchor | 3.53E-04 |
| 16 | GO:0004559: alpha-mannosidase activity | 6.58E-04 |
| 17 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.58E-04 |
| 18 | GO:0019899: enzyme binding | 7.69E-04 |
| 19 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.00E-03 |
| 20 | GO:0003777: microtubule motor activity | 1.12E-03 |
| 21 | GO:0000049: tRNA binding | 1.67E-03 |
| 22 | GO:0043424: protein histidine kinase binding | 2.62E-03 |
| 23 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.62E-03 |
| 24 | GO:0022891: substrate-specific transmembrane transporter activity | 3.15E-03 |
| 25 | GO:0003727: single-stranded RNA binding | 3.33E-03 |
| 26 | GO:0003723: RNA binding | 5.00E-03 |
| 27 | GO:0016597: amino acid binding | 5.59E-03 |
| 28 | GO:0016168: chlorophyll binding | 6.04E-03 |
| 29 | GO:0016491: oxidoreductase activity | 6.44E-03 |
| 30 | GO:0004519: endonuclease activity | 7.38E-03 |
| 31 | GO:0050897: cobalt ion binding | 7.72E-03 |
| 32 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.01E-03 |
| 33 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.04E-02 |
| 34 | GO:0043621: protein self-association | 1.04E-02 |
| 35 | GO:0016887: ATPase activity | 1.05E-02 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.09E-02 |
| 37 | GO:0019843: rRNA binding | 1.82E-02 |
| 38 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.86E-02 |
| 39 | GO:0008017: microtubule binding | 2.37E-02 |
| 40 | GO:0042802: identical protein binding | 2.72E-02 |
| 41 | GO:0016788: hydrolase activity, acting on ester bonds | 3.17E-02 |
| 42 | GO:0050660: flavin adenine dinucleotide binding | 3.47E-02 |
| 43 | GO:0052689: carboxylic ester hydrolase activity | 3.92E-02 |
| 44 | GO:0003924: GTPase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.21E-14 |
| 2 | GO:0030286: dynein complex | 2.02E-06 |
| 3 | GO:0042644: chloroplast nucleoid | 2.33E-05 |
| 4 | GO:0030095: chloroplast photosystem II | 6.58E-05 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 1.56E-04 |
| 6 | GO:0042646: plastid nucleoid | 2.63E-04 |
| 7 | GO:0009295: nucleoid | 3.27E-04 |
| 8 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 3.53E-04 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 5.65E-04 |
| 10 | GO:0031977: thylakoid lumen | 7.08E-04 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 7.69E-04 |
| 12 | GO:0009570: chloroplast stroma | 9.43E-04 |
| 13 | GO:0016324: apical plasma membrane | 1.39E-03 |
| 14 | GO:0000311: plastid large ribosomal subunit | 1.67E-03 |
| 15 | GO:0009508: plastid chromosome | 1.82E-03 |
| 16 | GO:0005875: microtubule associated complex | 2.29E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 2.62E-03 |
| 18 | GO:0042651: thylakoid membrane | 2.62E-03 |
| 19 | GO:0005871: kinesin complex | 3.52E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 4.31E-03 |
| 21 | GO:0009523: photosystem II | 4.31E-03 |
| 22 | GO:0031969: chloroplast membrane | 4.61E-03 |
| 23 | GO:0005778: peroxisomal membrane | 5.36E-03 |
| 24 | GO:0015934: large ribosomal subunit | 7.72E-03 |
| 25 | GO:0005747: mitochondrial respiratory chain complex I | 1.39E-02 |
| 26 | GO:0009579: thylakoid | 1.44E-02 |
| 27 | GO:0005759: mitochondrial matrix | 2.14E-02 |
| 28 | GO:0009505: plant-type cell wall | 3.07E-02 |
| 29 | GO:0005874: microtubule | 3.56E-02 |