Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G22310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090070: positive regulation of ribosome biogenesis0.00E+00
2GO:0006364: rRNA processing2.37E-11
3GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.21E-05
4GO:0000469: cleavage involved in rRNA processing5.48E-05
5GO:0030490: maturation of SSU-rRNA5.48E-05
6GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery5.48E-05
7GO:0036228: protein targeting to nuclear inner membrane5.48E-05
8GO:0042254: ribosome biogenesis6.73E-05
9GO:0009553: embryo sac development1.79E-04
10GO:0045604: regulation of epidermal cell differentiation2.28E-04
11GO:0006421: asparaginyl-tRNA aminoacylation2.28E-04
12GO:0006606: protein import into nucleus2.70E-04
13GO:0048825: cotyledon development3.37E-04
14GO:0009451: RNA modification3.99E-04
15GO:0006479: protein methylation4.45E-04
16GO:0046345: abscisic acid catabolic process4.45E-04
17GO:0006405: RNA export from nucleus5.66E-04
18GO:0030488: tRNA methylation8.25E-04
19GO:0048444: floral organ morphogenesis8.25E-04
20GO:0010077: maintenance of inflorescence meristem identity8.25E-04
21GO:0045995: regulation of embryonic development9.62E-04
22GO:0000028: ribosomal small subunit assembly1.11E-03
23GO:0019827: stem cell population maintenance1.11E-03
24GO:0042255: ribosome assembly1.11E-03
25GO:0001522: pseudouridine synthesis1.11E-03
26GO:0009793: embryo development ending in seed dormancy1.12E-03
27GO:0009880: embryonic pattern specification1.26E-03
28GO:0001708: cell fate specification1.41E-03
29GO:2000024: regulation of leaf development1.41E-03
30GO:0006349: regulation of gene expression by genetic imprinting1.58E-03
31GO:0006913: nucleocytoplasmic transport1.93E-03
32GO:0010582: floral meristem determinacy2.11E-03
33GO:2000012: regulation of auxin polar transport2.30E-03
34GO:0009790: embryo development2.90E-03
35GO:0051301: cell division3.25E-03
36GO:0009561: megagametogenesis4.23E-03
37GO:0010501: RNA secondary structure unwinding4.71E-03
38GO:0009960: endosperm development4.96E-03
39GO:0010305: leaf vascular tissue pattern formation4.96E-03
40GO:0080156: mitochondrial mRNA modification5.74E-03
41GO:0000910: cytokinesis7.11E-03
42GO:0009926: auxin polar transport1.26E-02
43GO:0006260: DNA replication1.44E-02
44GO:0006417: regulation of translation1.67E-02
45GO:0016569: covalent chromatin modification1.91E-02
46GO:0007049: cell cycle4.34E-02
47GO:0048366: leaf development4.51E-02
48GO:0080167: response to karrikin4.68E-02
RankGO TermAdjusted P value
1GO:0000166: nucleotide binding1.20E-11
2GO:0003723: RNA binding5.48E-06
3GO:0030515: snoRNA binding1.67E-05
4GO:0016274: protein-arginine N-methyltransferase activity5.48E-05
5GO:0001054: RNA polymerase I activity6.26E-05
6GO:0008026: ATP-dependent helicase activity2.02E-04
7GO:0004519: endonuclease activity2.19E-04
8GO:0004816: asparagine-tRNA ligase activity2.28E-04
9GO:0004004: ATP-dependent RNA helicase activity6.07E-04
10GO:0008143: poly(A) binding9.62E-04
11GO:0043022: ribosome binding1.11E-03
12GO:0017056: structural constituent of nuclear pore1.11E-03
13GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.42E-03
14GO:0005487: nucleocytoplasmic transporter activity1.58E-03
15GO:0004521: endoribonuclease activity2.11E-03
16GO:0001056: RNA polymerase III activity2.11E-03
17GO:0003887: DNA-directed DNA polymerase activity2.90E-03
18GO:0008168: methyltransferase activity5.08E-03
19GO:0005096: GTPase activator activity9.22E-03
20GO:0004650: polygalacturonase activity1.87E-02
21GO:0016829: lyase activity2.47E-02
22GO:0005525: GTP binding2.83E-02
RankGO TermAdjusted P value
1GO:0034455: t-UTP complex0.00E+00
2GO:0034388: Pwp2p-containing subcomplex of 90S preribosome0.00E+00
3GO:0030688: preribosome, small subunit precursor0.00E+00
4GO:0032153: cell division site0.00E+00
5GO:0005730: nucleolus7.53E-16
6GO:0005634: nucleus6.68E-11
7GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.38E-06
8GO:0005736: DNA-directed RNA polymerase I complex3.56E-05
9GO:0044611: nuclear pore inner ring5.48E-05
10GO:0032040: small-subunit processome7.32E-05
11GO:0005666: DNA-directed RNA polymerase III complex1.58E-03
12GO:0005829: cytosol4.02E-03
13GO:0009504: cell plate5.48E-03
14GO:0031965: nuclear membrane5.48E-03
15GO:0005643: nuclear pore8.91E-03
16GO:0005819: spindle1.12E-02
17GO:0005635: nuclear envelope1.63E-02
18GO:0005834: heterotrimeric G-protein complex1.83E-02
19GO:0009524: phragmoplast2.43E-02
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Gene type



Gene DE type