Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G21650

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035264: multicellular organism growth0.00E+00
2GO:0019593: mannitol biosynthetic process0.00E+00
3GO:2001143: N-methylnicotinate transport0.00E+00
4GO:0034263: positive regulation of autophagy in response to ER overload0.00E+00
5GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
6GO:2001142: nicotinate transport0.00E+00
7GO:0002764: immune response-regulating signaling pathway0.00E+00
8GO:0042353: fucose biosynthetic process0.00E+00
9GO:0034775: glutathione transmembrane transport0.00E+00
10GO:0032497: detection of lipopolysaccharide0.00E+00
11GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
12GO:0006468: protein phosphorylation6.24E-13
13GO:0010200: response to chitin2.26E-10
14GO:0006751: glutathione catabolic process1.14E-06
15GO:0006955: immune response3.23E-06
16GO:0016045: detection of bacterium1.03E-05
17GO:0010359: regulation of anion channel activity1.03E-05
18GO:0002679: respiratory burst involved in defense response2.34E-05
19GO:0070588: calcium ion transmembrane transport5.22E-05
20GO:0010337: regulation of salicylic acid metabolic process9.94E-05
21GO:0009737: response to abscisic acid1.37E-04
22GO:0009611: response to wounding1.77E-04
23GO:0035556: intracellular signal transduction1.92E-04
24GO:0048544: recognition of pollen2.24E-04
25GO:2000070: regulation of response to water deprivation2.28E-04
26GO:0010726: positive regulation of hydrogen peroxide metabolic process2.48E-04
27GO:0046938: phytochelatin biosynthetic process2.48E-04
28GO:0051180: vitamin transport2.48E-04
29GO:0030974: thiamine pyrophosphate transport2.48E-04
30GO:0009865: pollen tube adhesion2.48E-04
31GO:0050691: regulation of defense response to virus by host2.48E-04
32GO:0006680: glucosylceramide catabolic process2.48E-04
33GO:0010193: response to ozone2.71E-04
34GO:0051865: protein autoubiquitination3.41E-04
35GO:0009626: plant-type hypersensitive response3.43E-04
36GO:2000280: regulation of root development4.05E-04
37GO:0016567: protein ubiquitination4.19E-04
38GO:0052544: defense response by callose deposition in cell wall5.47E-04
39GO:0042754: negative regulation of circadian rhythm5.49E-04
40GO:0010289: homogalacturonan biosynthetic process5.49E-04
41GO:0006898: receptor-mediated endocytosis5.49E-04
42GO:0015893: drug transport5.49E-04
43GO:0052542: defense response by callose deposition5.49E-04
44GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway5.73E-04
45GO:0046777: protein autophosphorylation6.08E-04
46GO:0090630: activation of GTPase activity8.92E-04
47GO:0010325: raffinose family oligosaccharide biosynthetic process8.92E-04
48GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation8.92E-04
49GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway8.92E-04
50GO:0080168: abscisic acid transport8.92E-04
51GO:0042344: indole glucosinolate catabolic process8.92E-04
52GO:0010288: response to lead ion8.92E-04
53GO:0009863: salicylic acid mediated signaling pathway1.09E-03
54GO:0006470: protein dephosphorylation1.17E-03
55GO:0009695: jasmonic acid biosynthetic process1.20E-03
56GO:0006986: response to unfolded protein1.27E-03
57GO:0030100: regulation of endocytosis1.27E-03
58GO:0033014: tetrapyrrole biosynthetic process1.27E-03
59GO:0015700: arsenite transport1.27E-03
60GO:0031408: oxylipin biosynthetic process1.32E-03
61GO:0046345: abscisic acid catabolic process1.70E-03
62GO:0009652: thigmotropism1.70E-03
63GO:0045727: positive regulation of translation1.70E-03
64GO:0034440: lipid oxidation1.70E-03
65GO:0042991: transcription factor import into nucleus1.70E-03
66GO:1902347: response to strigolactone1.70E-03
67GO:0016310: phosphorylation2.11E-03
68GO:0006665: sphingolipid metabolic process2.17E-03
69GO:0010117: photoprotection2.17E-03
70GO:0045038: protein import into chloroplast thylakoid membrane2.17E-03
71GO:0006952: defense response2.24E-03
72GO:0048366: leaf development2.38E-03
73GO:0010942: positive regulation of cell death2.67E-03
74GO:0010256: endomembrane system organization2.67E-03
75GO:0047484: regulation of response to osmotic stress2.67E-03
76GO:0018105: peptidyl-serine phosphorylation2.70E-03
77GO:0009742: brassinosteroid mediated signaling pathway2.80E-03
78GO:0042742: defense response to bacterium3.00E-03
79GO:0006979: response to oxidative stress3.04E-03
80GO:0010555: response to mannitol3.21E-03
81GO:0080086: stamen filament development3.21E-03
82GO:2000067: regulation of root morphogenesis3.21E-03
83GO:1901001: negative regulation of response to salt stress3.21E-03
84GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.21E-03
85GO:0006904: vesicle docking involved in exocytosis3.40E-03
86GO:0045892: negative regulation of transcription, DNA-templated3.47E-03
87GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.79E-03
88GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway3.79E-03
89GO:0051510: regulation of unidimensional cell growth3.79E-03
90GO:0010029: regulation of seed germination4.03E-03
91GO:0009816: defense response to bacterium, incompatible interaction4.03E-03
92GO:0045010: actin nucleation4.39E-03
93GO:0007155: cell adhesion4.39E-03
94GO:1900150: regulation of defense response to fungus4.39E-03
95GO:0009751: response to salicylic acid4.57E-03
96GO:0008219: cell death4.97E-03
97GO:0030968: endoplasmic reticulum unfolded protein response5.03E-03
98GO:0009699: phenylpropanoid biosynthetic process5.03E-03
99GO:0009932: cell tip growth5.03E-03
100GO:0060321: acceptance of pollen5.03E-03
101GO:0007186: G-protein coupled receptor signaling pathway5.03E-03
102GO:0006997: nucleus organization5.03E-03
103GO:0010204: defense response signaling pathway, resistance gene-independent5.03E-03
104GO:0098656: anion transmembrane transport5.70E-03
105GO:0046685: response to arsenic-containing substance5.70E-03
106GO:0090305: nucleic acid phosphodiester bond hydrolysis5.70E-03
107GO:0006783: heme biosynthetic process5.70E-03
108GO:0007166: cell surface receptor signaling pathway6.18E-03
109GO:0045087: innate immune response6.30E-03
110GO:0006779: porphyrin-containing compound biosynthetic process6.40E-03
111GO:0010018: far-red light signaling pathway6.40E-03
112GO:0009688: abscisic acid biosynthetic process7.12E-03
113GO:0006782: protoporphyrinogen IX biosynthetic process7.12E-03
114GO:0055062: phosphate ion homeostasis7.12E-03
115GO:0019538: protein metabolic process7.12E-03
116GO:0006887: exocytosis7.49E-03
117GO:0010015: root morphogenesis7.88E-03
118GO:0008285: negative regulation of cell proliferation7.88E-03
119GO:0009750: response to fructose7.88E-03
120GO:0051707: response to other organism8.13E-03
121GO:0010105: negative regulation of ethylene-activated signaling pathway8.66E-03
122GO:0018107: peptidyl-threonine phosphorylation9.47E-03
123GO:0055046: microgametogenesis9.47E-03
124GO:0005986: sucrose biosynthetic process9.47E-03
125GO:0009414: response to water deprivation9.62E-03
126GO:0006970: response to osmotic stress9.99E-03
127GO:0009846: pollen germination1.02E-02
128GO:0048467: gynoecium development1.03E-02
129GO:0002237: response to molecule of bacterial origin1.03E-02
130GO:0009723: response to ethylene1.09E-02
131GO:0009969: xyloglucan biosynthetic process1.12E-02
132GO:0009901: anther dehiscence1.12E-02
133GO:0071732: cellular response to nitric oxide1.12E-02
134GO:0009651: response to salt stress1.20E-02
135GO:0042753: positive regulation of circadian rhythm1.21E-02
136GO:0009620: response to fungus1.43E-02
137GO:0016998: cell wall macromolecule catabolic process1.49E-02
138GO:0030245: cellulose catabolic process1.59E-02
139GO:0009814: defense response, incompatible interaction1.59E-02
140GO:0030433: ubiquitin-dependent ERAD pathway1.59E-02
141GO:0071369: cellular response to ethylene stimulus1.69E-02
142GO:0040007: growth1.69E-02
143GO:0010089: xylem development1.79E-02
144GO:0048443: stamen development1.79E-02
145GO:0048653: anther development2.01E-02
146GO:0000271: polysaccharide biosynthetic process2.01E-02
147GO:0048364: root development2.07E-02
148GO:0048868: pollen tube development2.12E-02
149GO:0009741: response to brassinosteroid2.12E-02
150GO:0045489: pectin biosynthetic process2.12E-02
151GO:0006520: cellular amino acid metabolic process2.12E-02
152GO:0009790: embryo development2.29E-02
153GO:0009791: post-embryonic development2.34E-02
154GO:0009749: response to glucose2.34E-02
155GO:0002229: defense response to oomycetes2.46E-02
156GO:0009630: gravitropism2.58E-02
157GO:0009873: ethylene-activated signaling pathway2.70E-02
158GO:1901657: glycosyl compound metabolic process2.70E-02
159GO:0071281: cellular response to iron ion2.70E-02
160GO:0007623: circadian rhythm2.71E-02
161GO:0009639: response to red or far red light2.82E-02
162GO:0006914: autophagy2.82E-02
163GO:0051607: defense response to virus3.07E-02
164GO:0009617: response to bacterium3.24E-02
165GO:0015995: chlorophyll biosynthetic process3.59E-02
166GO:0009817: defense response to fungus, incompatible interaction3.86E-02
167GO:0048481: plant ovule development3.86E-02
168GO:0009555: pollen development4.00E-02
169GO:0009826: unidimensional cell growth4.03E-02
170GO:0009637: response to blue light4.56E-02
171GO:0016051: carbohydrate biosynthetic process4.56E-02
172GO:0009409: response to cold4.93E-02
RankGO TermAdjusted P value
1GO:0090417: N-methylnicotinate transporter activity0.00E+00
2GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
3GO:0090416: nicotinate transporter activity0.00E+00
4GO:0010857: calcium-dependent protein kinase activity0.00E+00
5GO:0004698: calcium-dependent protein kinase C activity0.00E+00
6GO:0017048: Rho GTPase binding0.00E+00
7GO:0005522: profilin binding0.00E+00
8GO:0008419: RNA lariat debranching enzyme activity0.00E+00
9GO:0016301: kinase activity6.66E-17
10GO:0004674: protein serine/threonine kinase activity3.19E-11
11GO:0005524: ATP binding3.14E-10
12GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity8.84E-08
13GO:0004672: protein kinase activity6.28E-06
14GO:0003840: gamma-glutamyltransferase activity1.03E-05
15GO:0036374: glutathione hydrolase activity1.03E-05
16GO:0004842: ubiquitin-protein transferase activity1.40E-04
17GO:0090422: thiamine pyrophosphate transporter activity2.48E-04
18GO:0015085: calcium ion transmembrane transporter activity2.48E-04
19GO:0046870: cadmium ion binding2.48E-04
20GO:0015446: ATPase-coupled arsenite transmembrane transporter activity2.48E-04
21GO:0090440: abscisic acid transporter activity2.48E-04
22GO:0004348: glucosylceramidase activity2.48E-04
23GO:0071992: phytochelatin transmembrane transporter activity2.48E-04
24GO:0016629: 12-oxophytodienoate reductase activity5.49E-04
25GO:0004103: choline kinase activity5.49E-04
26GO:0008883: glutamyl-tRNA reductase activity5.49E-04
27GO:0001047: core promoter binding5.49E-04
28GO:0017040: ceramidase activity5.49E-04
29GO:0003839: gamma-glutamylcyclotransferase activity5.49E-04
30GO:0005388: calcium-transporting ATPase activity7.09E-04
31GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.66E-04
32GO:0004722: protein serine/threonine phosphatase activity8.72E-04
33GO:0004383: guanylate cyclase activity8.92E-04
34GO:0016165: linoleate 13S-lipoxygenase activity8.92E-04
35GO:0001664: G-protein coupled receptor binding8.92E-04
36GO:0047274: galactinol-sucrose galactosyltransferase activity8.92E-04
37GO:0031683: G-protein beta/gamma-subunit complex binding8.92E-04
38GO:0001653: peptide receptor activity1.27E-03
39GO:0035251: UDP-glucosyltransferase activity1.32E-03
40GO:0030246: carbohydrate binding1.33E-03
41GO:0005516: calmodulin binding1.66E-03
42GO:0008514: organic anion transmembrane transporter activity1.70E-03
43GO:0019199: transmembrane receptor protein kinase activity1.70E-03
44GO:0031625: ubiquitin protein ligase binding1.89E-03
45GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity2.17E-03
46GO:0010294: abscisic acid glucosyltransferase activity2.17E-03
47GO:0080043: quercetin 3-O-glucosyltransferase activity2.32E-03
48GO:0080044: quercetin 7-O-glucosyltransferase activity2.32E-03
49GO:0051020: GTPase binding3.21E-03
50GO:0016758: transferase activity, transferring hexosyl groups3.34E-03
51GO:0004143: diacylglycerol kinase activity3.79E-03
52GO:0102425: myricetin 3-O-glucosyltransferase activity3.79E-03
53GO:0102360: daphnetin 3-O-glucosyltransferase activity3.79E-03
54GO:0016621: cinnamoyl-CoA reductase activity3.79E-03
55GO:0015144: carbohydrate transmembrane transporter activity4.35E-03
56GO:0047893: flavonol 3-O-glucosyltransferase activity4.39E-03
57GO:0004683: calmodulin-dependent protein kinase activity4.49E-03
58GO:0003951: NAD+ kinase activity5.03E-03
59GO:0005351: sugar:proton symporter activity5.06E-03
60GO:0008194: UDP-glycosyltransferase activity6.01E-03
61GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity7.12E-03
62GO:0004713: protein tyrosine kinase activity7.12E-03
63GO:0004521: endoribonuclease activity8.66E-03
64GO:0005262: calcium channel activity9.47E-03
65GO:0019888: protein phosphatase regulator activity9.47E-03
66GO:0005315: inorganic phosphate transmembrane transporter activity9.47E-03
67GO:0046872: metal ion binding1.35E-02
68GO:0004540: ribonuclease activity1.49E-02
69GO:0004707: MAP kinase activity1.49E-02
70GO:0003779: actin binding1.52E-02
71GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.59E-02
72GO:0022891: substrate-specific transmembrane transporter activity1.69E-02
73GO:0010181: FMN binding2.23E-02
74GO:0050662: coenzyme binding2.23E-02
75GO:0004518: nuclease activity2.58E-02
76GO:0051015: actin filament binding2.70E-02
77GO:0043565: sequence-specific DNA binding2.87E-02
78GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.94E-02
79GO:0009931: calcium-dependent protein serine/threonine kinase activity3.46E-02
80GO:0102483: scopolin beta-glucosidase activity3.59E-02
81GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.72E-02
82GO:0005515: protein binding3.85E-02
83GO:0005096: GTPase activator activity4.00E-02
84GO:0015238: drug transmembrane transporter activity4.00E-02
85GO:0046982: protein heterodimerization activity4.11E-02
86GO:0003676: nucleic acid binding4.48E-02
87GO:0004712: protein serine/threonine/tyrosine kinase activity4.86E-02
88GO:0008422: beta-glucosidase activity4.86E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane2.50E-08
2GO:0005911: cell-cell junction2.48E-04
3GO:0070382: exocytic vesicle2.48E-04
4GO:0000145: exocyst2.96E-04
5GO:0080085: signal recognition particle, chloroplast targeting5.49E-04
6GO:0070062: extracellular exosome1.27E-03
7GO:0045177: apical part of cell1.27E-03
8GO:0000793: condensed chromosome2.67E-03
9GO:0031463: Cul3-RING ubiquitin ligase complex2.67E-03
10GO:0030173: integral component of Golgi membrane3.21E-03
11GO:0000794: condensed nuclear chromosome3.79E-03
12GO:0043231: intracellular membrane-bounded organelle5.41E-03
13GO:0016021: integral component of membrane5.56E-03
14GO:0016604: nuclear body6.40E-03
15GO:0031902: late endosome membrane7.49E-03
16GO:0000159: protein phosphatase type 2A complex7.88E-03
17GO:0005768: endosome8.35E-03
18GO:0005938: cell cortex9.47E-03
19GO:0010008: endosome membrane1.34E-02
20GO:0012505: endomembrane system1.52E-02
21GO:0030136: clathrin-coated vesicle1.90E-02
22GO:0005770: late endosome2.12E-02
23GO:0009506: plasmodesma2.26E-02
24GO:0032580: Golgi cisterna membrane2.82E-02
25GO:0005778: peroxisomal membrane2.94E-02
26GO:0000786: nucleosome4.42E-02
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Gene type



Gene DE type