co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G21400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046294: formaldehyde catabolic process	0.00E+00
2	GO:0006721: terpenoid metabolic process	0.00E+00
3	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	5.75E-10
4	GO:0006567: threonine catabolic process	9.50E-05
5	GO:0016487: farnesol metabolic process	9.50E-05
6	GO:0006007: glucose catabolic process	9.50E-05
7	GO:0031468: nuclear envelope reassembly	9.50E-05
8	GO:0009853: photorespiration	1.45E-04
9	GO:0006099: tricarboxylic acid cycle	1.54E-04
10	GO:0043255: regulation of carbohydrate biosynthetic process	2.24E-04
11	GO:0019441: tryptophan catabolic process to kynurenine	2.24E-04
12	GO:0080183: response to photooxidative stress	2.24E-04
13	GO:0055114: oxidation-reduction process	3.19E-04
14	GO:0051603: proteolysis involved in cellular protein catabolic process	3.24E-04
15	GO:1901562: response to paraquat	3.73E-04
16	GO:0071492: cellular response to UV-A	3.73E-04
17	GO:0006760: folic acid-containing compound metabolic process	3.73E-04
18	GO:0006241: CTP biosynthetic process	5.37E-04
19	GO:0006165: nucleoside diphosphate phosphorylation	5.37E-04
20	GO:0006228: UTP biosynthetic process	5.37E-04
21	GO:0042391: regulation of membrane potential	5.52E-04
22	GO:0015991: ATP hydrolysis coupled proton transport	5.52E-04
23	GO:0006520: cellular amino acid metabolic process	5.95E-04
24	GO:0009765: photosynthesis, light harvesting	7.14E-04
25	GO:0006183: GTP biosynthetic process	7.14E-04
26	GO:0006221: pyrimidine nucleotide biosynthetic process	7.14E-04
27	GO:0006749: glutathione metabolic process	7.14E-04
28	GO:0032366: intracellular sterol transport	7.14E-04
29	GO:0044205: 'de novo' UMP biosynthetic process	7.14E-04
30	GO:0034613: cellular protein localization	7.14E-04
31	GO:0006646: phosphatidylethanolamine biosynthetic process	7.14E-04
32	GO:0006545: glycine biosynthetic process	7.14E-04
33	GO:0071486: cellular response to high light intensity	7.14E-04
34	GO:0070814: hydrogen sulfide biosynthetic process	1.10E-03
35	GO:0006796: phosphate-containing compound metabolic process	1.10E-03
36	GO:0009117: nucleotide metabolic process	1.10E-03
37	GO:0009407: toxin catabolic process	1.47E-03
38	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.54E-03
39	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.54E-03
40	GO:0050790: regulation of catalytic activity	1.54E-03
41	GO:0006955: immune response	1.54E-03
42	GO:0030091: protein repair	1.78E-03
43	GO:0000028: ribosomal small subunit assembly	1.78E-03
44	GO:0005975: carbohydrate metabolic process	1.96E-03
45	GO:0015996: chlorophyll catabolic process	2.03E-03
46	GO:0046686: response to cadmium ion	2.05E-03
47	GO:0009821: alkaloid biosynthetic process	2.29E-03
48	GO:0009636: response to toxic substance	2.42E-03
49	GO:0009970: cellular response to sulfate starvation	2.85E-03
50	GO:0000103: sulfate assimilation	2.85E-03
51	GO:0018119: peptidyl-cysteine S-nitrosylation	3.14E-03
52	GO:0009620: response to fungus	3.74E-03
53	GO:0006108: malate metabolic process	3.76E-03
54	GO:0050826: response to freezing	3.76E-03
55	GO:0007030: Golgi organization	4.41E-03
56	GO:0006487: protein N-linked glycosylation	5.10E-03
57	GO:0009058: biosynthetic process	5.39E-03
58	GO:0019915: lipid storage	5.83E-03
59	GO:0015992: proton transport	5.83E-03
60	GO:0016226: iron-sulfur cluster assembly	6.20E-03
61	GO:0006012: galactose metabolic process	6.58E-03
62	GO:0009409: response to cold	6.66E-03
63	GO:0034220: ion transmembrane transport	7.79E-03
64	GO:0010118: stomatal movement	7.79E-03
65	GO:0006662: glycerol ether metabolic process	8.21E-03
66	GO:0015986: ATP synthesis coupled proton transport	8.63E-03
67	GO:0061025: membrane fusion	8.63E-03
68	GO:0008654: phospholipid biosynthetic process	9.06E-03
69	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	9.51E-03
70	GO:1901657: glycosyl compound metabolic process	1.04E-02
71	GO:0006464: cellular protein modification process	1.09E-02
72	GO:0009615: response to virus	1.23E-02
73	GO:0009723: response to ethylene	1.27E-02
74	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.28E-02
75	GO:0080167: response to karrikin	1.36E-02
76	GO:0045454: cell redox homeostasis	1.63E-02
77	GO:0010043: response to zinc ion	1.65E-02
78	GO:0007568: aging	1.65E-02
79	GO:0034599: cellular response to oxidative stress	1.81E-02
80	GO:0006979: response to oxidative stress	1.82E-02
81	GO:0008152: metabolic process	2.22E-02
82	GO:0006508: proteolysis	2.28E-02
83	GO:0009809: lignin biosynthetic process	2.60E-02
84	GO:0006486: protein glycosylation	2.60E-02
85	GO:0009651: response to salt stress	2.60E-02
86	GO:0006096: glycolytic process	2.93E-02
87	GO:0009626: plant-type hypersensitive response	3.07E-02
88	GO:0010150: leaf senescence	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0004151: dihydroorotase activity	0.00E+00
2	GO:0047504: (-)-menthol dehydrogenase activity	0.00E+00
3	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
4	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
5	GO:0047886: farnesol dehydrogenase activity	0.00E+00
6	GO:0047501: (+)-neomenthol dehydrogenase activity	0.00E+00
7	GO:0008137: NADH dehydrogenase (ubiquinone) activity	9.06E-07
8	GO:0005261: cation channel activity	2.96E-05
9	GO:0080079: cellobiose glucosidase activity	9.50E-05
10	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	9.50E-05
11	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	9.50E-05
12	GO:0004793: threonine aldolase activity	9.50E-05
13	GO:0004307: ethanolaminephosphotransferase activity	9.50E-05
14	GO:0008732: L-allo-threonine aldolase activity	9.50E-05
15	GO:0046480: galactolipid galactosyltransferase activity	9.50E-05
16	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	2.24E-04
17	GO:0030572: phosphatidyltransferase activity	2.24E-04
18	GO:0004142: diacylglycerol cholinephosphotransferase activity	2.24E-04
19	GO:0004061: arylformamidase activity	2.24E-04
20	GO:0030553: cGMP binding	2.41E-04
21	GO:0030552: cAMP binding	2.41E-04
22	GO:0016788: hydrolase activity, acting on ester bonds	2.43E-04
23	GO:0005216: ion channel activity	3.32E-04
24	GO:0004557: alpha-galactosidase activity	3.73E-04
25	GO:0004781: sulfate adenylyltransferase (ATP) activity	3.73E-04
26	GO:0052692: raffinose alpha-galactosidase activity	3.73E-04
27	GO:0008106: alcohol dehydrogenase (NADP+) activity	5.37E-04
28	GO:0035529: NADH pyrophosphatase activity	5.37E-04
29	GO:0004550: nucleoside diphosphate kinase activity	5.37E-04
30	GO:0030551: cyclic nucleotide binding	5.52E-04
31	GO:0005249: voltage-gated potassium channel activity	5.52E-04
32	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	5.95E-04
33	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	7.14E-04
34	GO:0004576: oligosaccharyl transferase activity	7.14E-04
35	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	7.14E-04
36	GO:0004197: cysteine-type endopeptidase activity	7.76E-04
37	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	9.02E-04
38	GO:0051117: ATPase binding	1.10E-03
39	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.10E-03
40	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.10E-03
41	GO:0030060: L-malate dehydrogenase activity	1.31E-03
42	GO:0051920: peroxiredoxin activity	1.31E-03
43	GO:0004427: inorganic diphosphatase activity	1.54E-03
44	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.54E-03
45	GO:0050897: cobalt ion binding	1.54E-03
46	GO:0004034: aldose 1-epimerase activity	1.78E-03
47	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.78E-03
48	GO:0016209: antioxidant activity	1.78E-03
49	GO:0004364: glutathione transferase activity	2.07E-03
50	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	2.29E-03
51	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.29E-03
52	GO:0047617: acyl-CoA hydrolase activity	2.56E-03
53	GO:0016844: strictosidine synthase activity	2.56E-03
54	GO:0004129: cytochrome-c oxidase activity	3.14E-03
55	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.14E-03
56	GO:0008234: cysteine-type peptidase activity	3.20E-03
57	GO:0008378: galactosyltransferase activity	3.44E-03
58	GO:0004089: carbonate dehydratase activity	3.76E-03
59	GO:0043130: ubiquitin binding	5.10E-03
60	GO:0051536: iron-sulfur cluster binding	5.10E-03
61	GO:0008324: cation transmembrane transporter activity	5.46E-03
62	GO:0047134: protein-disulfide reductase activity	7.38E-03
63	GO:0050662: coenzyme binding	8.63E-03
64	GO:0004791: thioredoxin-disulfide reductase activity	8.63E-03
65	GO:0016853: isomerase activity	8.63E-03
66	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.04E-02
67	GO:0015250: water channel activity	1.23E-02
68	GO:0016168: chlorophyll binding	1.28E-02
69	GO:0008236: serine-type peptidase activity	1.43E-02
70	GO:0052689: carboxylic ester hydrolase activity	1.50E-02
71	GO:0030145: manganese ion binding	1.65E-02
72	GO:0008422: beta-glucosidase activity	1.87E-02
73	GO:0051539: 4 iron, 4 sulfur cluster binding	1.93E-02
74	GO:0004185: serine-type carboxypeptidase activity	2.10E-02
75	GO:0051537: 2 iron, 2 sulfur cluster binding	2.23E-02
76	GO:0005198: structural molecule activity	2.29E-02
77	GO:0016491: oxidoreductase activity	2.55E-02
78	GO:0016298: lipase activity	2.67E-02
79	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.00E-02
80	GO:0022857: transmembrane transporter activity	3.20E-02
81	GO:0015035: protein disulfide oxidoreductase activity	3.42E-02
82	GO:0016829: lyase activity	4.15E-02
83	GO:0030170: pyridoxal phosphate binding	4.23E-02
84	GO:0016787: hydrolase activity	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
3	GO:0005747: mitochondrial respiratory chain complex I	3.75E-15
4	GO:0005773: vacuole	5.25E-07
5	GO:0005758: mitochondrial intermembrane space	8.58E-06
6	GO:0045271: respiratory chain complex I	1.02E-05
7	GO:0005739: mitochondrion	1.65E-05
8	GO:0005774: vacuolar membrane	3.12E-05
9	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	5.25E-05
10	GO:0045273: respiratory chain complex II	5.25E-05
11	GO:0005759: mitochondrial matrix	9.40E-05
12	GO:0005764: lysosome	2.13E-04
13	GO:0031966: mitochondrial membrane	2.82E-04
14	GO:0005829: cytosol	5.01E-04
15	GO:0016471: vacuolar proton-transporting V-type ATPase complex	7.14E-04
16	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	7.14E-04
17	GO:0048046: apoplast	7.45E-04
18	GO:0005746: mitochondrial respiratory chain	9.02E-04
19	GO:0008250: oligosaccharyltransferase complex	9.02E-04
20	GO:0031463: Cul3-RING ubiquitin ligase complex	1.10E-03
21	GO:0009536: plastid	1.34E-03
22	GO:0000325: plant-type vacuole	1.54E-03
23	GO:0031359: integral component of chloroplast outer membrane	1.54E-03
24	GO:0009501: amyloplast	1.78E-03
25	GO:0005763: mitochondrial small ribosomal subunit	2.29E-03
26	GO:0005783: endoplasmic reticulum	3.09E-03
27	GO:0005750: mitochondrial respiratory chain complex III	4.08E-03
28	GO:0005753: mitochondrial proton-transporting ATP synthase complex	4.41E-03
29	GO:0005887: integral component of plasma membrane	5.24E-03
30	GO:0005615: extracellular space	7.90E-03
31	GO:0009523: photosystem II	9.06E-03
32	GO:0010319: stromule	1.14E-02
33	GO:0009507: chloroplast	1.17E-02
34	GO:0009707: chloroplast outer membrane	1.49E-02
35	GO:0016020: membrane	2.34E-02
36	GO:0009505: plant-type cell wall	2.40E-02
37	GO:0016607: nuclear speck	3.00E-02
38	GO:0010287: plastoglobule	3.78E-02
39	GO:0009543: chloroplast thylakoid lumen	3.92E-02
40	GO:0005777: peroxisome	4.08E-02