co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G21070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071289: cellular response to nickel ion	0.00E+00
2	GO:0006862: nucleotide transport	0.00E+00
3	GO:0045595: regulation of cell differentiation	0.00E+00
4	GO:0046967: cytosol to ER transport	0.00E+00
5	GO:0009268: response to pH	0.00E+00
6	GO:0010200: response to chitin	1.08E-11
7	GO:0009611: response to wounding	5.27E-06
8	GO:0051180: vitamin transport	1.06E-04
9	GO:0007229: integrin-mediated signaling pathway	1.06E-04
10	GO:0030974: thiamine pyrophosphate transport	1.06E-04
11	GO:0006680: glucosylceramide catabolic process	1.06E-04
12	GO:2000280: regulation of root development	1.18E-04
13	GO:0009873: ethylene-activated signaling pathway	1.92E-04
14	GO:0042754: negative regulation of circadian rhythm	2.48E-04
15	GO:0015893: drug transport	2.48E-04
16	GO:0009695: jasmonic acid biosynthetic process	3.85E-04
17	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	4.12E-04
18	GO:0080168: abscisic acid transport	4.12E-04
19	GO:0042344: indole glucosinolate catabolic process	4.12E-04
20	GO:0033014: tetrapyrrole biosynthetic process	5.92E-04
21	GO:0045727: positive regulation of translation	7.86E-04
22	GO:0034440: lipid oxidation	7.86E-04
23	GO:0009749: response to glucose	7.87E-04
24	GO:0009247: glycolipid biosynthetic process	9.92E-04
25	GO:0045487: gibberellin catabolic process	9.92E-04
26	GO:0030041: actin filament polymerization	9.92E-04
27	GO:0010286: heat acclimation	1.07E-03
28	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.21E-03
29	GO:0048317: seed morphogenesis	1.21E-03
30	GO:0006796: phosphate-containing compound metabolic process	1.21E-03
31	GO:0009737: response to abscisic acid	1.23E-03
32	GO:0080086: stamen filament development	1.45E-03
33	GO:0006955: immune response	1.70E-03
34	GO:1900057: positive regulation of leaf senescence	1.70E-03
35	GO:0006401: RNA catabolic process	1.70E-03
36	GO:0006468: protein phosphorylation	1.80E-03
37	GO:0035556: intracellular signal transduction	1.97E-03
38	GO:0019375: galactolipid biosynthetic process	1.97E-03
39	GO:0009415: response to water	1.97E-03
40	GO:2000070: regulation of response to water deprivation	1.97E-03
41	GO:0045010: actin nucleation	1.97E-03
42	GO:0006970: response to osmotic stress	2.20E-03
43	GO:0006839: mitochondrial transport	2.21E-03
44	GO:0009699: phenylpropanoid biosynthetic process	2.24E-03
45	GO:0048193: Golgi vesicle transport	2.24E-03
46	GO:0051865: protein autoubiquitination	2.53E-03
47	GO:0006783: heme biosynthetic process	2.53E-03
48	GO:0006779: porphyrin-containing compound biosynthetic process	2.84E-03
49	GO:0009086: methionine biosynthetic process	2.84E-03
50	GO:0006782: protoporphyrinogen IX biosynthetic process	3.15E-03
51	GO:0055062: phosphate ion homeostasis	3.15E-03
52	GO:0009809: lignin biosynthetic process	3.35E-03
53	GO:0010224: response to UV-B	3.46E-03
54	GO:0010015: root morphogenesis	3.47E-03
55	GO:0009698: phenylpropanoid metabolic process	3.47E-03
56	GO:0009682: induced systemic resistance	3.47E-03
57	GO:0052544: defense response by callose deposition in cell wall	3.47E-03
58	GO:0018107: peptidyl-threonine phosphorylation	4.16E-03
59	GO:0010167: response to nitrate	4.88E-03
60	GO:0009901: anther dehiscence	4.88E-03
61	GO:0009414: response to water deprivation	5.10E-03
62	GO:0000398: mRNA splicing, via spliceosome	5.48E-03
63	GO:0031408: oxylipin biosynthetic process	6.46E-03
64	GO:0010017: red or far-red light signaling pathway	6.87E-03
65	GO:0030433: ubiquitin-dependent ERAD pathway	6.87E-03
66	GO:0009790: embryo development	6.93E-03
67	GO:0006355: regulation of transcription, DNA-templated	6.97E-03
68	GO:0009686: gibberellin biosynthetic process	7.30E-03
69	GO:0040007: growth	7.30E-03
70	GO:0009409: response to cold	8.37E-03
71	GO:0048653: anther development	8.64E-03
72	GO:0006351: transcription, DNA-templated	8.83E-03
73	GO:0009960: endosperm development	9.10E-03
74	GO:0071472: cellular response to salt stress	9.10E-03
75	GO:0048544: recognition of pollen	9.58E-03
76	GO:0009617: response to bacterium	9.79E-03
77	GO:0045893: positive regulation of transcription, DNA-templated	1.06E-02
78	GO:0010193: response to ozone	1.06E-02
79	GO:0019760: glucosinolate metabolic process	1.21E-02
80	GO:0009639: response to red or far red light	1.21E-02
81	GO:0051607: defense response to virus	1.31E-02
82	GO:0010027: thylakoid membrane organization	1.37E-02
83	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.42E-02
84	GO:0015995: chlorophyll biosynthetic process	1.54E-02
85	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.63E-02
86	GO:0009817: defense response to fungus, incompatible interaction	1.65E-02
87	GO:0046777: protein autophosphorylation	1.69E-02
88	GO:0009631: cold acclimation	1.83E-02
89	GO:0045087: innate immune response	1.95E-02
90	GO:0042542: response to hydrogen peroxide	2.27E-02
91	GO:0009408: response to heat	2.33E-02
92	GO:0051707: response to other organism	2.34E-02
93	GO:0000209: protein polyubiquitination	2.41E-02
94	GO:0009753: response to jasmonic acid	2.50E-02
95	GO:0006855: drug transmembrane transport	2.61E-02
96	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.68E-02
97	GO:0000165: MAPK cascade	2.68E-02
98	GO:0006364: rRNA processing	2.89E-02
99	GO:0009736: cytokinin-activated signaling pathway	2.89E-02
100	GO:0009651: response to salt stress	3.24E-02
101	GO:0009620: response to fungus	3.49E-02
102	GO:0042545: cell wall modification	3.64E-02
103	GO:0006396: RNA processing	3.80E-02
104	GO:0018105: peptidyl-serine phosphorylation	3.80E-02
105	GO:0009742: brassinosteroid mediated signaling pathway	3.88E-02
106	GO:0009738: abscisic acid-activated signaling pathway	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
4	GO:0016621: cinnamoyl-CoA reductase activity	4.78E-05
5	GO:0090422: thiamine pyrophosphate transporter activity	1.06E-04
6	GO:0090440: abscisic acid transporter activity	1.06E-04
7	GO:0004348: glucosylceramidase activity	1.06E-04
8	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.06E-04
9	GO:0003958: NADPH-hemoprotein reductase activity	2.48E-04
10	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	2.48E-04
11	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	2.48E-04
12	GO:0004103: choline kinase activity	2.48E-04
13	GO:0008883: glutamyl-tRNA reductase activity	2.48E-04
14	GO:0001047: core promoter binding	2.48E-04
15	GO:0046423: allene-oxide cyclase activity	4.12E-04
16	GO:0004383: guanylate cyclase activity	4.12E-04
17	GO:0016165: linoleate 13S-lipoxygenase activity	4.12E-04
18	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	5.92E-04
19	GO:0001653: peptide receptor activity	5.92E-04
20	GO:0004715: non-membrane spanning protein tyrosine kinase activity	5.92E-04
21	GO:0035250: UDP-galactosyltransferase activity	5.92E-04
22	GO:0004672: protein kinase activity	5.94E-04
23	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.87E-04
24	GO:0050662: coenzyme binding	7.35E-04
25	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.07E-03
26	GO:0019137: thioglucosidase activity	1.21E-03
27	GO:0016301: kinase activity	1.62E-03
28	GO:0004427: inorganic diphosphatase activity	1.70E-03
29	GO:0004674: protein serine/threonine kinase activity	2.01E-03
30	GO:0047617: acyl-CoA hydrolase activity	2.84E-03
31	GO:0004713: protein tyrosine kinase activity	3.15E-03
32	GO:0019888: protein phosphatase regulator activity	4.16E-03
33	GO:0000175: 3'-5'-exoribonuclease activity	4.16E-03
34	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	6.10E-03
35	GO:0004540: ribonuclease activity	6.46E-03
36	GO:0004707: MAP kinase activity	6.46E-03
37	GO:0005524: ATP binding	6.73E-03
38	GO:0043565: sequence-specific DNA binding	6.92E-03
39	GO:0015297: antiporter activity	7.82E-03
40	GO:0016853: isomerase activity	9.58E-03
41	GO:0010181: FMN binding	9.58E-03
42	GO:0019901: protein kinase binding	1.01E-02
43	GO:0102483: scopolin beta-glucosidase activity	1.54E-02
44	GO:0004004: ATP-dependent RNA helicase activity	1.54E-02
45	GO:0015238: drug transmembrane transporter activity	1.71E-02
46	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.83E-02
47	GO:0008422: beta-glucosidase activity	2.08E-02
48	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.08E-02
49	GO:0050661: NADP binding	2.14E-02
50	GO:0051539: 4 iron, 4 sulfur cluster binding	2.14E-02
51	GO:0044212: transcription regulatory region DNA binding	2.18E-02
52	GO:0016298: lipase activity	2.97E-02
53	GO:0031625: ubiquitin protein ligase binding	3.11E-02
54	GO:0045330: aspartyl esterase activity	3.11E-02
55	GO:0030599: pectinesterase activity	3.56E-02
56	GO:0003779: actin binding	3.64E-02
57	GO:0004386: helicase activity	3.96E-02
58	GO:0003676: nucleic acid binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0019008: molybdopterin synthase complex	1.06E-04
2	GO:0000178: exosome (RNase complex)	9.92E-04
3	GO:0000159: protein phosphatase type 2A complex	3.47E-03
4	GO:0071013: catalytic step 2 spliceosome	3.47E-03
5	GO:0031225: anchored component of membrane	3.56E-03
6	GO:0009706: chloroplast inner membrane	4.75E-03
7	GO:0030136: clathrin-coated vesicle	8.19E-03
8	GO:0005770: late endosome	9.10E-03
9	GO:0000932: P-body	1.37E-02
10	GO:0009707: chloroplast outer membrane	1.65E-02
11	GO:0005743: mitochondrial inner membrane	2.17E-02
12	GO:0031902: late endosome membrane	2.21E-02
13	GO:0009536: plastid	2.81E-02
14	GO:0009505: plant-type cell wall	2.89E-02
15	GO:0005634: nucleus	4.36E-02
16	GO:0005623: cell	4.45E-02
17	GO:0009524: phragmoplast	4.53E-02