Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G20270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080094: response to trehalose-6-phosphate0.00E+00
2GO:0046177: D-gluconate catabolic process0.00E+00
3GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport0.00E+00
4GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
5GO:0006073: cellular glucan metabolic process0.00E+00
6GO:0042908: xenobiotic transport0.00E+00
7GO:0009856: pollination0.00E+00
8GO:0018293: protein-FAD linkage0.00E+00
9GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
10GO:0006593: ornithine catabolic process0.00E+00
11GO:0055114: oxidation-reduction process1.15E-07
12GO:0010189: vitamin E biosynthetic process9.88E-05
13GO:0010597: green leaf volatile biosynthetic process2.02E-04
14GO:0006169: adenosine salvage2.02E-04
15GO:0009852: auxin catabolic process2.02E-04
16GO:0006560: proline metabolic process2.02E-04
17GO:0019544: arginine catabolic process to glutamate2.02E-04
18GO:0006148: inosine catabolic process2.02E-04
19GO:0006835: dicarboxylic acid transport2.02E-04
20GO:0000305: response to oxygen radical2.02E-04
21GO:0010411: xyloglucan metabolic process3.73E-04
22GO:0009684: indoleacetic acid biosynthetic process4.10E-04
23GO:0009915: phloem sucrose loading4.52E-04
24GO:0032527: protein exit from endoplasmic reticulum4.52E-04
25GO:0043100: pyrimidine nucleobase salvage4.52E-04
26GO:0006123: mitochondrial electron transport, cytochrome c to oxygen4.52E-04
27GO:0010133: proline catabolic process to glutamate4.52E-04
28GO:0002213: defense response to insect4.70E-04
29GO:0051646: mitochondrion localization7.36E-04
30GO:0071230: cellular response to amino acid stimulus7.36E-04
31GO:0045493: xylan catabolic process7.36E-04
32GO:0016570: histone modification7.36E-04
33GO:0019762: glucosinolate catabolic process7.47E-04
34GO:0006855: drug transmembrane transport9.61E-04
35GO:0015700: arsenite transport1.05E-03
36GO:0006572: tyrosine catabolic process1.05E-03
37GO:1902476: chloride transmembrane transport1.05E-03
38GO:0046686: response to cadmium ion1.19E-03
39GO:0015846: polyamine transport1.40E-03
40GO:0010600: regulation of auxin biosynthetic process1.40E-03
41GO:0006749: glutathione metabolic process1.40E-03
42GO:0009902: chloroplast relocation1.40E-03
43GO:0009694: jasmonic acid metabolic process1.40E-03
44GO:0006542: glutamine biosynthetic process1.40E-03
45GO:0006646: phosphatidylethanolamine biosynthetic process1.40E-03
46GO:0015743: malate transport1.40E-03
47GO:0051781: positive regulation of cell division1.40E-03
48GO:0042391: regulation of membrane potential1.49E-03
49GO:0009741: response to brassinosteroid1.61E-03
50GO:0009696: salicylic acid metabolic process1.78E-03
51GO:0007029: endoplasmic reticulum organization1.78E-03
52GO:0044209: AMP salvage1.78E-03
53GO:0009611: response to wounding1.80E-03
54GO:0009851: auxin biosynthetic process1.85E-03
55GO:0009651: response to salt stress2.17E-03
56GO:0042732: D-xylose metabolic process2.19E-03
57GO:0002238: response to molecule of fungal origin2.19E-03
58GO:0006561: proline biosynthetic process2.19E-03
59GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.19E-03
60GO:0006555: methionine metabolic process2.19E-03
61GO:1901001: negative regulation of response to salt stress2.63E-03
62GO:0006120: mitochondrial electron transport, NADH to ubiquinone2.63E-03
63GO:0019509: L-methionine salvage from methylthioadenosine2.63E-03
64GO:0009816: defense response to bacterium, incompatible interaction3.01E-03
65GO:0006821: chloride transport3.09E-03
66GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.09E-03
67GO:0019745: pentacyclic triterpenoid biosynthetic process3.09E-03
68GO:0008272: sulfate transport3.09E-03
69GO:0050790: regulation of catalytic activity3.09E-03
70GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.09E-03
71GO:0006368: transcription elongation from RNA polymerase II promoter3.09E-03
72GO:0009627: systemic acquired resistance3.17E-03
73GO:0042128: nitrate assimilation3.17E-03
74GO:0009850: auxin metabolic process3.59E-03
75GO:0005975: carbohydrate metabolic process3.78E-03
76GO:0015996: chlorophyll catabolic process4.10E-03
77GO:0006098: pentose-phosphate shunt4.65E-03
78GO:0046916: cellular transition metal ion homeostasis4.65E-03
79GO:0009835: fruit ripening4.65E-03
80GO:0046685: response to arsenic-containing substance4.65E-03
81GO:0006099: tricarboxylic acid cycle4.90E-03
82GO:0051453: regulation of intracellular pH5.21E-03
83GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process5.21E-03
84GO:0055062: phosphate ion homeostasis5.80E-03
85GO:0009970: cellular response to sulfate starvation5.80E-03
86GO:0045036: protein targeting to chloroplast5.80E-03
87GO:0042546: cell wall biogenesis6.28E-03
88GO:0006816: calcium ion transport6.41E-03
89GO:0072593: reactive oxygen species metabolic process6.41E-03
90GO:0000272: polysaccharide catabolic process6.41E-03
91GO:0009636: response to toxic substance6.78E-03
92GO:0012501: programmed cell death7.04E-03
93GO:0071365: cellular response to auxin stimulus7.04E-03
94GO:0006790: sulfur compound metabolic process7.04E-03
95GO:0042538: hyperosmotic salinity response7.58E-03
96GO:0010102: lateral root morphogenesis7.70E-03
97GO:0006807: nitrogen compound metabolic process7.70E-03
98GO:0006108: malate metabolic process7.70E-03
99GO:0050826: response to freezing7.70E-03
100GO:0046274: lignin catabolic process7.70E-03
101GO:0009725: response to hormone7.70E-03
102GO:0002237: response to molecule of bacterial origin8.37E-03
103GO:0009266: response to temperature stimulus8.37E-03
104GO:0051603: proteolysis involved in cellular protein catabolic process8.43E-03
105GO:0046854: phosphatidylinositol phosphorylation9.07E-03
106GO:0042753: positive regulation of circadian rhythm9.79E-03
107GO:0034976: response to endoplasmic reticulum stress9.79E-03
108GO:0006636: unsaturated fatty acid biosynthetic process9.79E-03
109GO:0009833: plant-type primary cell wall biogenesis9.79E-03
110GO:0009626: plant-type hypersensitive response1.03E-02
111GO:0045454: cell redox homeostasis1.03E-02
112GO:0051017: actin filament bundle assembly1.05E-02
113GO:0006874: cellular calcium ion homeostasis1.13E-02
114GO:0048511: rhythmic process1.21E-02
115GO:0016226: iron-sulfur cluster assembly1.29E-02
116GO:0019748: secondary metabolic process1.29E-02
117GO:0016042: lipid catabolic process1.30E-02
118GO:0040007: growth1.37E-02
119GO:0009625: response to insect1.37E-02
120GO:0006508: proteolysis1.49E-02
121GO:0009058: biosynthetic process1.54E-02
122GO:0000271: polysaccharide biosynthetic process1.62E-02
123GO:0080022: primary root development1.62E-02
124GO:0010087: phloem or xylem histogenesis1.62E-02
125GO:0015991: ATP hydrolysis coupled proton transport1.62E-02
126GO:0048653: anther development1.62E-02
127GO:0010154: fruit development1.71E-02
128GO:0006814: sodium ion transport1.80E-02
129GO:0008654: phospholipid biosynthetic process1.89E-02
130GO:0007623: circadian rhythm2.01E-02
131GO:0010150: leaf senescence2.01E-02
132GO:0071555: cell wall organization2.05E-02
133GO:0016032: viral process2.08E-02
134GO:0009630: gravitropism2.08E-02
135GO:1901657: glycosyl compound metabolic process2.18E-02
136GO:0009739: response to gibberellin2.25E-02
137GO:0010252: auxin homeostasis2.28E-02
138GO:0016125: sterol metabolic process2.28E-02
139GO:0009617: response to bacterium2.40E-02
140GO:0016126: sterol biosynthetic process2.58E-02
141GO:0015995: chlorophyll biosynthetic process2.90E-02
142GO:0009817: defense response to fungus, incompatible interaction3.12E-02
143GO:0030244: cellulose biosynthetic process3.12E-02
144GO:0008219: cell death3.12E-02
145GO:0009813: flavonoid biosynthetic process3.23E-02
146GO:0010311: lateral root formation3.23E-02
147GO:0009407: toxin catabolic process3.35E-02
148GO:0006811: ion transport3.35E-02
149GO:0007568: aging3.46E-02
150GO:0006865: amino acid transport3.58E-02
151GO:0045087: innate immune response3.69E-02
152GO:0055085: transmembrane transport3.72E-02
153GO:0030001: metal ion transport4.05E-02
154GO:0006631: fatty acid metabolic process4.18E-02
155GO:0042542: response to hydrogen peroxide4.30E-02
RankGO TermAdjusted P value
1GO:0009045: xylose isomerase activity0.00E+00
2GO:0047504: (-)-menthol dehydrogenase activity0.00E+00
3GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity0.00E+00
4GO:0000250: lanosterol synthase activity0.00E+00
5GO:0010327: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity0.00E+00
6GO:0015205: nucleobase transmembrane transporter activity0.00E+00
7GO:0032441: pheophorbide a oxygenase activity0.00E+00
8GO:0046316: gluconokinase activity0.00E+00
9GO:0015391: nucleobase:cation symporter activity0.00E+00
10GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity0.00E+00
11GO:0010176: homogentisate phytyltransferase activity0.00E+00
12GO:0017153: sodium:dicarboxylate symporter activity0.00E+00
13GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
14GO:0080109: indole-3-acetonitrile nitrile hydratase activity0.00E+00
15GO:0047501: (+)-neomenthol dehydrogenase activity0.00E+00
16GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity0.00E+00
17GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
18GO:0102165: (Z)-3-hexen-1-ol acetyltransferase activity0.00E+00
19GO:0080061: indole-3-acetonitrile nitrilase activity1.06E-08
20GO:0000257: nitrilase activity5.15E-08
21GO:0010277: chlorophyllide a oxygenase [overall] activity7.09E-06
22GO:0008106: alcohol dehydrogenase (NADP+) activity1.63E-05
23GO:0016788: hydrolase activity, acting on ester bonds2.57E-05
24GO:0080032: methyl jasmonate esterase activity3.00E-05
25GO:0004866: endopeptidase inhibitor activity7.11E-05
26GO:0080030: methyl indole-3-acetate esterase activity7.11E-05
27GO:0005261: cation channel activity9.88E-05
28GO:0005507: copper ion binding1.92E-04
29GO:0016780: phosphotransferase activity, for other substituted phosphate groups2.02E-04
30GO:0070401: NADP+ binding2.02E-04
31GO:0045437: uridine nucleosidase activity2.02E-04
32GO:0008066: glutamate receptor activity2.02E-04
33GO:0052638: indole-3-butyrate beta-glucosyltransferase activity2.02E-04
34GO:0015446: ATPase-coupled arsenite transmembrane transporter activity2.02E-04
35GO:0009671: nitrate:proton symporter activity2.02E-04
36GO:0071992: phytochelatin transmembrane transporter activity2.02E-04
37GO:0004307: ethanolaminephosphotransferase activity2.02E-04
38GO:0004001: adenosine kinase activity2.02E-04
39GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor2.02E-04
40GO:0016229: steroid dehydrogenase activity2.02E-04
41GO:0046480: galactolipid galactosyltransferase activity2.02E-04
42GO:0080079: cellobiose glucosidase activity2.02E-04
43GO:0016491: oxidoreductase activity2.17E-04
44GO:0016798: hydrolase activity, acting on glycosyl bonds3.73E-04
45GO:0008559: xenobiotic-transporting ATPase activity4.10E-04
46GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding4.52E-04
47GO:0030572: phosphatidyltransferase activity4.52E-04
48GO:0004142: diacylglycerol cholinephosphotransferase activity4.52E-04
49GO:0004362: glutathione-disulfide reductase activity4.52E-04
50GO:0004566: beta-glucuronidase activity4.52E-04
51GO:0015179: L-amino acid transmembrane transporter activity4.52E-04
52GO:0004047: aminomethyltransferase activity4.52E-04
53GO:0047724: inosine nucleosidase activity4.52E-04
54GO:0030552: cAMP binding6.71E-04
55GO:0004867: serine-type endopeptidase inhibitor activity6.71E-04
56GO:0030553: cGMP binding6.71E-04
57GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding7.36E-04
58GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity7.36E-04
59GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity7.36E-04
60GO:0005216: ion channel activity9.08E-04
61GO:0008324: cation transmembrane transporter activity9.08E-04
62GO:0015293: symporter activity9.17E-04
63GO:0008276: protein methyltransferase activity1.05E-03
64GO:0015203: polyamine transmembrane transporter activity1.05E-03
65GO:0080031: methyl salicylate esterase activity1.05E-03
66GO:0016298: lipase activity1.20E-03
67GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.40E-03
68GO:0009044: xylan 1,4-beta-xylosidase activity1.40E-03
69GO:0004506: squalene monooxygenase activity1.40E-03
70GO:0050302: indole-3-acetaldehyde oxidase activity1.40E-03
71GO:0005253: anion channel activity1.40E-03
72GO:0016866: intramolecular transferase activity1.40E-03
73GO:0004301: epoxide hydrolase activity1.40E-03
74GO:0004659: prenyltransferase activity1.40E-03
75GO:0030551: cyclic nucleotide binding1.49E-03
76GO:0005249: voltage-gated potassium channel activity1.49E-03
77GO:0008177: succinate dehydrogenase (ubiquinone) activity1.78E-03
78GO:0004356: glutamate-ammonia ligase activity1.78E-03
79GO:0052689: carboxylic ester hydrolase activity1.91E-03
80GO:0016762: xyloglucan:xyloglucosyl transferase activity1.98E-03
81GO:0004197: cysteine-type endopeptidase activity2.11E-03
82GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.19E-03
83GO:0004462: lactoylglutathione lyase activity2.19E-03
84GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.19E-03
85GO:0016615: malate dehydrogenase activity2.19E-03
86GO:0005247: voltage-gated chloride channel activity2.19E-03
87GO:2001070: starch binding2.19E-03
88GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.63E-03
89GO:0016161: beta-amylase activity2.63E-03
90GO:0030060: L-malate dehydrogenase activity2.63E-03
91GO:0004723: calcium-dependent protein serine/threonine phosphatase activity2.63E-03
92GO:0030170: pyridoxal phosphate binding2.71E-03
93GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.82E-03
94GO:0051213: dioxygenase activity2.85E-03
95GO:0015140: malate transmembrane transporter activity3.09E-03
96GO:0015297: antiporter activity3.37E-03
97GO:0103075: indole-3-pyruvate monooxygenase activity3.59E-03
98GO:0004033: aldo-keto reductase (NADP) activity3.59E-03
99GO:0004869: cysteine-type endopeptidase inhibitor activity3.59E-03
100GO:0015238: drug transmembrane transporter activity3.89E-03
101GO:0008271: secondary active sulfate transmembrane transporter activity4.10E-03
102GO:0046914: transition metal ion binding4.10E-03
103GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity4.65E-03
104GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.69E-03
105GO:0008422: beta-glucosidase activity5.12E-03
106GO:0015174: basic amino acid transmembrane transporter activity5.21E-03
107GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.21E-03
108GO:0050661: NADP binding5.34E-03
109GO:0008171: O-methyltransferase activity5.80E-03
110GO:0051537: 2 iron, 2 sulfur cluster binding6.53E-03
111GO:0052716: hydroquinone:oxygen oxidoreductase activity7.04E-03
112GO:0015116: sulfate transmembrane transporter activity7.04E-03
113GO:0008378: galactosyltransferase activity7.04E-03
114GO:0050660: flavin adenine dinucleotide binding7.49E-03
115GO:0004022: alcohol dehydrogenase (NAD) activity7.70E-03
116GO:0005262: calcium channel activity7.70E-03
117GO:0008234: cysteine-type peptidase activity9.02E-03
118GO:0004970: ionotropic glutamate receptor activity9.07E-03
119GO:0005217: intracellular ligand-gated ion channel activity9.07E-03
120GO:0046872: metal ion binding9.66E-03
121GO:0051536: iron-sulfur cluster binding1.05E-02
122GO:0035251: UDP-glucosyltransferase activity1.21E-02
123GO:0005516: calmodulin binding1.32E-02
124GO:0016760: cellulose synthase (UDP-forming) activity1.37E-02
125GO:0003756: protein disulfide isomerase activity1.45E-02
126GO:0004499: N,N-dimethylaniline monooxygenase activity1.45E-02
127GO:0009055: electron carrier activity1.47E-02
128GO:0004527: exonuclease activity1.71E-02
129GO:0008137: NADH dehydrogenase (ubiquinone) activity1.99E-02
130GO:0008194: UDP-glycosyltransferase activity2.25E-02
131GO:0016759: cellulose synthase activity2.28E-02
132GO:0008483: transaminase activity2.38E-02
133GO:0016722: oxidoreductase activity, oxidizing metal ions2.38E-02
134GO:0016413: O-acetyltransferase activity2.48E-02
135GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.56E-02
136GO:0042802: identical protein binding2.56E-02
137GO:0102483: scopolin beta-glucosidase activity2.90E-02
138GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.01E-02
139GO:0008236: serine-type peptidase activity3.01E-02
140GO:0050897: cobalt ion binding3.46E-02
141GO:0008233: peptidase activity3.79E-02
142GO:0003993: acid phosphatase activity3.81E-02
143GO:0004497: monooxygenase activity3.86E-02
144GO:0004364: glutathione transferase activity4.30E-02
145GO:0004185: serine-type carboxypeptidase activity4.42E-02
RankGO TermAdjusted P value
1GO:0005759: mitochondrial matrix6.85E-05
2GO:0005773: vacuole2.93E-04
3GO:0005578: proteinaceous extracellular matrix5.33E-04
4GO:0005576: extracellular region5.90E-04
5GO:0005764: lysosome6.01E-04
6GO:0005758: mitochondrial intermembrane space8.26E-04
7GO:0048046: apoplast8.97E-04
8GO:0009526: plastid envelope1.40E-03
9GO:0016593: Cdc73/Paf1 complex1.40E-03
10GO:0010168: ER body2.19E-03
11GO:0034707: chloride channel complex2.19E-03
12GO:0031359: integral component of chloroplast outer membrane3.09E-03
13GO:0005829: cytosol3.28E-03
14GO:0000325: plant-type vacuole4.28E-03
15GO:0010494: cytoplasmic stress granule4.65E-03
16GO:0005887: integral component of plasma membrane4.72E-03
17GO:0005765: lysosomal membrane6.41E-03
18GO:0005884: actin filament6.41E-03
19GO:0031012: extracellular matrix7.70E-03
20GO:0031969: chloroplast membrane8.18E-03
21GO:0009505: plant-type cell wall8.83E-03
22GO:0005886: plasma membrane8.96E-03
23GO:0070469: respiratory chain1.13E-02
24GO:0009706: chloroplast inner membrane1.16E-02
25GO:0005623: cell1.50E-02
26GO:0009705: plant-type vacuole membrane2.01E-02
27GO:0005615: extracellular space2.25E-02
28GO:0000932: P-body2.58E-02
29GO:0005783: endoplasmic reticulum2.94E-02
30GO:0009707: chloroplast outer membrane3.12E-02
31GO:0019005: SCF ubiquitin ligase complex3.12E-02
32GO:0005774: vacuolar membrane4.89E-02
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Gene type



Gene DE type