GO Enrichment Analysis of Co-expressed Genes with
AT3G20250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 2 | GO:0035280: miRNA loading onto RISC involved in gene silencing by miRNA | 1.57E-05 |
| 3 | GO:0051170: nuclear import | 4.12E-05 |
| 4 | GO:0006610: ribosomal protein import into nucleus | 4.12E-05 |
| 5 | GO:0006517: protein deglycosylation | 7.34E-05 |
| 6 | GO:0006516: glycoprotein catabolic process | 1.11E-04 |
| 7 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.11E-04 |
| 8 | GO:0071219: cellular response to molecule of bacterial origin | 1.53E-04 |
| 9 | GO:0010188: response to microbial phytotoxin | 1.53E-04 |
| 10 | GO:0080142: regulation of salicylic acid biosynthetic process | 1.53E-04 |
| 11 | GO:0000060: protein import into nucleus, translocation | 2.47E-04 |
| 12 | GO:0006694: steroid biosynthetic process | 2.97E-04 |
| 13 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 3.49E-04 |
| 14 | GO:0006607: NLS-bearing protein import into nucleus | 5.18E-04 |
| 15 | GO:0010112: regulation of systemic acquired resistance | 5.18E-04 |
| 16 | GO:0009060: aerobic respiration | 5.18E-04 |
| 17 | GO:1900426: positive regulation of defense response to bacterium | 5.76E-04 |
| 18 | GO:0009688: abscisic acid biosynthetic process | 6.38E-04 |
| 19 | GO:0010072: primary shoot apical meristem specification | 7.00E-04 |
| 20 | GO:0016485: protein processing | 7.00E-04 |
| 21 | GO:0009617: response to bacterium | 8.87E-04 |
| 22 | GO:0010073: meristem maintenance | 1.18E-03 |
| 23 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.33E-03 |
| 24 | GO:0080092: regulation of pollen tube growth | 1.33E-03 |
| 25 | GO:0042147: retrograde transport, endosome to Golgi | 1.56E-03 |
| 26 | GO:0010051: xylem and phloem pattern formation | 1.65E-03 |
| 27 | GO:0006886: intracellular protein transport | 1.71E-03 |
| 28 | GO:0006623: protein targeting to vacuole | 1.90E-03 |
| 29 | GO:0010183: pollen tube guidance | 1.90E-03 |
| 30 | GO:0009851: auxin biosynthetic process | 1.90E-03 |
| 31 | GO:0002229: defense response to oomycetes | 1.99E-03 |
| 32 | GO:0010193: response to ozone | 1.99E-03 |
| 33 | GO:0006904: vesicle docking involved in exocytosis | 2.36E-03 |
| 34 | GO:0016126: sterol biosynthetic process | 2.55E-03 |
| 35 | GO:0010311: lateral root formation | 3.15E-03 |
| 36 | GO:0009867: jasmonic acid mediated signaling pathway | 3.58E-03 |
| 37 | GO:0006887: exocytosis | 4.02E-03 |
| 38 | GO:0000209: protein polyubiquitination | 4.37E-03 |
| 39 | GO:0010224: response to UV-B | 5.34E-03 |
| 40 | GO:0006417: regulation of translation | 5.59E-03 |
| 41 | GO:0009626: plant-type hypersensitive response | 6.11E-03 |
| 42 | GO:0015031: protein transport | 9.14E-03 |
| 43 | GO:0006470: protein dephosphorylation | 1.07E-02 |
| 44 | GO:0009860: pollen tube growth | 1.39E-02 |
| 45 | GO:0045454: cell redox homeostasis | 1.75E-02 |
| 46 | GO:0045892: negative regulation of transcription, DNA-templated | 1.77E-02 |
| 47 | GO:0009751: response to salicylic acid | 2.01E-02 |
| 48 | GO:0055114: oxidation-reduction process | 2.14E-02 |
| 49 | GO:0006508: proteolysis | 2.22E-02 |
| 50 | GO:0055085: transmembrane transport | 3.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity | 0.00E+00 |
| 2 | GO:0034450: ubiquitin-ubiquitin ligase activity | 1.57E-05 |
| 3 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 4.12E-05 |
| 4 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 7.34E-05 |
| 5 | GO:0004222: metalloendopeptidase activity | 1.53E-04 |
| 6 | GO:0004031: aldehyde oxidase activity | 1.53E-04 |
| 7 | GO:0050302: indole-3-acetaldehyde oxidase activity | 1.53E-04 |
| 8 | GO:0031593: polyubiquitin binding | 2.47E-04 |
| 9 | GO:0008565: protein transporter activity | 6.55E-04 |
| 10 | GO:0008139: nuclear localization sequence binding | 8.30E-04 |
| 11 | GO:0004176: ATP-dependent peptidase activity | 1.25E-03 |
| 12 | GO:0050660: flavin adenine dinucleotide binding | 1.30E-03 |
| 13 | GO:0047134: protein-disulfide reductase activity | 1.56E-03 |
| 14 | GO:0008536: Ran GTPase binding | 1.73E-03 |
| 15 | GO:0001085: RNA polymerase II transcription factor binding | 1.73E-03 |
| 16 | GO:0004791: thioredoxin-disulfide reductase activity | 1.82E-03 |
| 17 | GO:0009055: electron carrier activity | 2.18E-03 |
| 18 | GO:0008237: metallopeptidase activity | 2.36E-03 |
| 19 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.36E-03 |
| 20 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.36E-03 |
| 21 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.48E-03 |
| 22 | GO:0005215: transporter activity | 7.95E-03 |
| 23 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 8.50E-03 |
| 24 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.15E-02 |
| 25 | GO:0003682: chromatin binding | 1.38E-02 |
| 26 | GO:0042803: protein homodimerization activity | 1.81E-02 |
| 27 | GO:0004722: protein serine/threonine phosphatase activity | 1.87E-02 |
| 28 | GO:0016887: ATPase activity | 2.78E-02 |
| 29 | GO:0000166: nucleotide binding | 3.06E-02 |
| 30 | GO:0005516: calmodulin binding | 4.09E-02 |
| 31 | GO:0005525: GTP binding | 4.36E-02 |
| 32 | GO:0005509: calcium ion binding | 4.77E-02 |
| 33 | GO:0005506: iron ion binding | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008305: integrin complex | 0.00E+00 |
| 2 | GO:0070062: extracellular exosome | 1.11E-04 |
| 3 | GO:0030904: retromer complex | 2.47E-04 |
| 4 | GO:0034399: nuclear periphery | 4.04E-04 |
| 5 | GO:0005829: cytosol | 4.51E-04 |
| 6 | GO:0017119: Golgi transport complex | 6.38E-04 |
| 7 | GO:0005750: mitochondrial respiratory chain complex III | 8.97E-04 |
| 8 | GO:0005758: mitochondrial intermembrane space | 1.10E-03 |
| 9 | GO:0005741: mitochondrial outer membrane | 1.25E-03 |
| 10 | GO:0005743: mitochondrial inner membrane | 1.89E-03 |
| 11 | GO:0031965: nuclear membrane | 1.90E-03 |
| 12 | GO:0000145: exocyst | 2.08E-03 |
| 13 | GO:0005667: transcription factor complex | 2.74E-03 |
| 14 | GO:0000151: ubiquitin ligase complex | 3.05E-03 |
| 15 | GO:0005643: nuclear pore | 3.05E-03 |
| 16 | GO:0031902: late endosome membrane | 4.02E-03 |
| 17 | GO:0005654: nucleoplasm | 7.62E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 7.77E-03 |
| 19 | GO:0005623: cell | 7.91E-03 |
| 20 | GO:0005759: mitochondrial matrix | 9.10E-03 |
| 21 | GO:0005794: Golgi apparatus | 9.55E-03 |
| 22 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.41E-02 |
| 23 | GO:0005774: vacuolar membrane | 2.50E-02 |
| 24 | GO:0005887: integral component of plasma membrane | 2.53E-02 |
| 25 | GO:0005802: trans-Golgi network | 4.28E-02 |
| 26 | GO:0005622: intracellular | 4.61E-02 |
| 27 | GO:0005768: endosome | 4.69E-02 |