GO Enrichment Analysis of Co-expressed Genes with
AT3G19810
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 3 | GO:0000373: Group II intron splicing | 2.84E-05 |
| 4 | GO:1904966: positive regulation of vitamin E biosynthetic process | 4.74E-05 |
| 5 | GO:1904964: positive regulation of phytol biosynthetic process | 4.74E-05 |
| 6 | GO:1902458: positive regulation of stomatal opening | 4.74E-05 |
| 7 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 4.74E-05 |
| 8 | GO:0006419: alanyl-tRNA aminoacylation | 4.74E-05 |
| 9 | GO:0033388: putrescine biosynthetic process from arginine | 4.74E-05 |
| 10 | GO:0000256: allantoin catabolic process | 1.17E-04 |
| 11 | GO:0009446: putrescine biosynthetic process | 1.17E-04 |
| 12 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.17E-04 |
| 13 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.17E-04 |
| 14 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.17E-04 |
| 15 | GO:0010136: ureide catabolic process | 2.00E-04 |
| 16 | GO:2001141: regulation of RNA biosynthetic process | 2.94E-04 |
| 17 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.94E-04 |
| 18 | GO:0006145: purine nucleobase catabolic process | 2.94E-04 |
| 19 | GO:0051016: barbed-end actin filament capping | 2.94E-04 |
| 20 | GO:0042989: sequestering of actin monomers | 2.94E-04 |
| 21 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.94E-04 |
| 22 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.94E-04 |
| 23 | GO:0045038: protein import into chloroplast thylakoid membrane | 5.00E-04 |
| 24 | GO:0016558: protein import into peroxisome matrix | 5.00E-04 |
| 25 | GO:0030041: actin filament polymerization | 5.00E-04 |
| 26 | GO:0009117: nucleotide metabolic process | 6.13E-04 |
| 27 | GO:0010189: vitamin E biosynthetic process | 7.31E-04 |
| 28 | GO:1901259: chloroplast rRNA processing | 7.31E-04 |
| 29 | GO:0006400: tRNA modification | 8.54E-04 |
| 30 | GO:0051510: regulation of unidimensional cell growth | 8.54E-04 |
| 31 | GO:2000070: regulation of response to water deprivation | 9.81E-04 |
| 32 | GO:0048564: photosystem I assembly | 9.81E-04 |
| 33 | GO:0017004: cytochrome complex assembly | 1.11E-03 |
| 34 | GO:0071482: cellular response to light stimulus | 1.11E-03 |
| 35 | GO:0009821: alkaloid biosynthetic process | 1.25E-03 |
| 36 | GO:0006352: DNA-templated transcription, initiation | 1.70E-03 |
| 37 | GO:0006807: nitrogen compound metabolic process | 2.03E-03 |
| 38 | GO:0090351: seedling development | 2.38E-03 |
| 39 | GO:0019853: L-ascorbic acid biosynthetic process | 2.38E-03 |
| 40 | GO:0006863: purine nucleobase transport | 2.56E-03 |
| 41 | GO:0007010: cytoskeleton organization | 2.74E-03 |
| 42 | GO:0006012: galactose metabolic process | 3.52E-03 |
| 43 | GO:0009793: embryo development ending in seed dormancy | 3.68E-03 |
| 44 | GO:0009306: protein secretion | 3.73E-03 |
| 45 | GO:0000413: protein peptidyl-prolyl isomerization | 4.15E-03 |
| 46 | GO:0048868: pollen tube development | 4.37E-03 |
| 47 | GO:0009658: chloroplast organization | 4.38E-03 |
| 48 | GO:0042254: ribosome biogenesis | 4.46E-03 |
| 49 | GO:0008654: phospholipid biosynthetic process | 4.81E-03 |
| 50 | GO:0006635: fatty acid beta-oxidation | 5.04E-03 |
| 51 | GO:0002229: defense response to oomycetes | 5.04E-03 |
| 52 | GO:0010193: response to ozone | 5.04E-03 |
| 53 | GO:0010411: xyloglucan metabolic process | 7.28E-03 |
| 54 | GO:0018298: protein-chromophore linkage | 7.81E-03 |
| 55 | GO:0009817: defense response to fungus, incompatible interaction | 7.81E-03 |
| 56 | GO:0048527: lateral root development | 8.65E-03 |
| 57 | GO:0006810: transport | 9.12E-03 |
| 58 | GO:0009637: response to blue light | 9.22E-03 |
| 59 | GO:0009853: photorespiration | 9.22E-03 |
| 60 | GO:0010114: response to red light | 1.10E-02 |
| 61 | GO:0042546: cell wall biogenesis | 1.13E-02 |
| 62 | GO:0006364: rRNA processing | 1.36E-02 |
| 63 | GO:0010224: response to UV-B | 1.39E-02 |
| 64 | GO:0048316: seed development | 1.57E-02 |
| 65 | GO:0009553: embryo sac development | 1.71E-02 |
| 66 | GO:0009058: biosynthetic process | 2.13E-02 |
| 67 | GO:0009845: seed germination | 2.16E-02 |
| 68 | GO:0009790: embryo development | 2.29E-02 |
| 69 | GO:0006413: translational initiation | 2.45E-02 |
| 70 | GO:0009451: RNA modification | 2.62E-02 |
| 71 | GO:0071555: cell wall organization | 2.89E-02 |
| 72 | GO:0080167: response to karrikin | 4.09E-02 |
| 73 | GO:0005975: carbohydrate metabolic process | 4.36E-02 |
| 74 | GO:0046686: response to cadmium ion | 4.48E-02 |
| 75 | GO:0015979: photosynthesis | 4.50E-02 |
| 76 | GO:0045454: cell redox homeostasis | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 2 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 3 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 4 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 5 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 6 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 7 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 8 | GO:0004813: alanine-tRNA ligase activity | 4.74E-05 |
| 9 | GO:0047911: galacturan 1,4-alpha-galacturonidase activity | 4.74E-05 |
| 10 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.17E-04 |
| 11 | GO:0004751: ribose-5-phosphate isomerase activity | 2.00E-04 |
| 12 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.00E-04 |
| 13 | GO:0009041: uridylate kinase activity | 2.94E-04 |
| 14 | GO:0035529: NADH pyrophosphatase activity | 2.94E-04 |
| 15 | GO:0001053: plastid sigma factor activity | 3.94E-04 |
| 16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.94E-04 |
| 17 | GO:0008453: alanine-glyoxylate transaminase activity | 3.94E-04 |
| 18 | GO:0016987: sigma factor activity | 3.94E-04 |
| 19 | GO:0043495: protein anchor | 3.94E-04 |
| 20 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 3.94E-04 |
| 21 | GO:0003785: actin monomer binding | 5.00E-04 |
| 22 | GO:0016462: pyrophosphatase activity | 6.13E-04 |
| 23 | GO:0004605: phosphatidate cytidylyltransferase activity | 6.13E-04 |
| 24 | GO:0042578: phosphoric ester hydrolase activity | 6.13E-04 |
| 25 | GO:0019899: enzyme binding | 8.54E-04 |
| 26 | GO:0004033: aldo-keto reductase (NADP) activity | 9.81E-04 |
| 27 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.03E-03 |
| 28 | GO:0016844: strictosidine synthase activity | 1.40E-03 |
| 29 | GO:0003779: actin binding | 1.62E-03 |
| 30 | GO:0003723: RNA binding | 1.85E-03 |
| 31 | GO:0000049: tRNA binding | 1.86E-03 |
| 32 | GO:0019843: rRNA binding | 2.07E-03 |
| 33 | GO:0005528: FK506 binding | 2.74E-03 |
| 34 | GO:0043424: protein histidine kinase binding | 2.93E-03 |
| 35 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.93E-03 |
| 36 | GO:0022891: substrate-specific transmembrane transporter activity | 3.52E-03 |
| 37 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.04E-03 |
| 38 | GO:0048038: quinone binding | 5.04E-03 |
| 39 | GO:0016597: amino acid binding | 6.25E-03 |
| 40 | GO:0016168: chlorophyll binding | 6.75E-03 |
| 41 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.28E-03 |
| 42 | GO:0050897: cobalt ion binding | 8.65E-03 |
| 43 | GO:0004364: glutathione transferase activity | 1.07E-02 |
| 44 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.36E-02 |
| 45 | GO:0004650: polygalacturonase activity | 1.64E-02 |
| 46 | GO:0008026: ATP-dependent helicase activity | 1.82E-02 |
| 47 | GO:0005507: copper ion binding | 2.03E-02 |
| 48 | GO:0003743: translation initiation factor activity | 2.88E-02 |
| 49 | GO:0042802: identical protein binding | 3.05E-02 |
| 50 | GO:0016788: hydrolase activity, acting on ester bonds | 3.56E-02 |
| 51 | GO:0016491: oxidoreductase activity | 3.79E-02 |
| 52 | GO:0050660: flavin adenine dinucleotide binding | 3.90E-02 |
| 53 | GO:0008233: peptidase activity | 4.04E-02 |
| 54 | GO:0052689: carboxylic ester hydrolase activity | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.26E-21 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 7.34E-09 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 9.99E-06 |
| 4 | GO:0008290: F-actin capping protein complex | 1.17E-04 |
| 5 | GO:0033281: TAT protein transport complex | 2.00E-04 |
| 6 | GO:0042646: plastid nucleoid | 2.94E-04 |
| 7 | GO:0009941: chloroplast envelope | 6.84E-04 |
| 8 | GO:0031977: thylakoid lumen | 8.28E-04 |
| 9 | GO:0009533: chloroplast stromal thylakoid | 8.54E-04 |
| 10 | GO:0042644: chloroplast nucleoid | 1.25E-03 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.25E-03 |
| 12 | GO:0005938: cell cortex | 2.03E-03 |
| 13 | GO:0009508: plastid chromosome | 2.03E-03 |
| 14 | GO:0030095: chloroplast photosystem II | 2.20E-03 |
| 15 | GO:0009579: thylakoid | 2.88E-03 |
| 16 | GO:0009534: chloroplast thylakoid | 2.91E-03 |
| 17 | GO:0042651: thylakoid membrane | 2.93E-03 |
| 18 | GO:0015629: actin cytoskeleton | 3.52E-03 |
| 19 | GO:0009523: photosystem II | 4.81E-03 |
| 20 | GO:0009570: chloroplast stroma | 4.94E-03 |
| 21 | GO:0005778: peroxisomal membrane | 6.00E-03 |
| 22 | GO:0009295: nucleoid | 6.00E-03 |
| 23 | GO:0015934: large ribosomal subunit | 8.65E-03 |
| 24 | GO:0005747: mitochondrial respiratory chain complex I | 1.57E-02 |
| 25 | GO:0005759: mitochondrial matrix | 2.41E-02 |
| 26 | GO:0048046: apoplast | 2.87E-02 |
| 27 | GO:0009505: plant-type cell wall | 3.61E-02 |
| 28 | GO:0031969: chloroplast membrane | 4.09E-02 |