GO Enrichment Analysis of Co-expressed Genes with
AT3G19740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 2 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.17E-05 |
| 4 | GO:0016579: protein deubiquitination | 2.13E-05 |
| 5 | GO:0061014: positive regulation of mRNA catabolic process | 5.64E-05 |
| 6 | GO:0010265: SCF complex assembly | 5.64E-05 |
| 7 | GO:0006106: fumarate metabolic process | 5.64E-05 |
| 8 | GO:1990542: mitochondrial transmembrane transport | 5.64E-05 |
| 9 | GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic | 5.64E-05 |
| 10 | GO:0010072: primary shoot apical meristem specification | 6.52E-05 |
| 11 | GO:0006101: citrate metabolic process | 1.37E-04 |
| 12 | GO:0019752: carboxylic acid metabolic process | 1.37E-04 |
| 13 | GO:0051788: response to misfolded protein | 1.37E-04 |
| 14 | GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid | 2.34E-04 |
| 15 | GO:0046168: glycerol-3-phosphate catabolic process | 2.34E-04 |
| 16 | GO:0010051: xylem and phloem pattern formation | 2.80E-04 |
| 17 | GO:0009647: skotomorphogenesis | 3.41E-04 |
| 18 | GO:0010587: miRNA catabolic process | 3.41E-04 |
| 19 | GO:0006882: cellular zinc ion homeostasis | 3.41E-04 |
| 20 | GO:0001676: long-chain fatty acid metabolic process | 3.41E-04 |
| 21 | GO:0046513: ceramide biosynthetic process | 3.41E-04 |
| 22 | GO:0006072: glycerol-3-phosphate metabolic process | 3.41E-04 |
| 23 | GO:0030163: protein catabolic process | 4.24E-04 |
| 24 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 4.56E-04 |
| 25 | GO:0036065: fucosylation | 5.78E-04 |
| 26 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 5.78E-04 |
| 27 | GO:0006097: glyoxylate cycle | 5.78E-04 |
| 28 | GO:0045116: protein neddylation | 5.78E-04 |
| 29 | GO:0046686: response to cadmium ion | 6.00E-04 |
| 30 | GO:0001731: formation of translation preinitiation complex | 7.07E-04 |
| 31 | GO:0043248: proteasome assembly | 7.07E-04 |
| 32 | GO:0042176: regulation of protein catabolic process | 7.07E-04 |
| 33 | GO:0000245: spliceosomal complex assembly | 8.44E-04 |
| 34 | GO:1901001: negative regulation of response to salt stress | 8.44E-04 |
| 35 | GO:0006099: tricarboxylic acid cycle | 9.06E-04 |
| 36 | GO:0070370: cellular heat acclimation | 9.85E-04 |
| 37 | GO:0048528: post-embryonic root development | 9.85E-04 |
| 38 | GO:0006402: mRNA catabolic process | 1.13E-03 |
| 39 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.13E-03 |
| 40 | GO:0040029: regulation of gene expression, epigenetic | 1.13E-03 |
| 41 | GO:0006102: isocitrate metabolic process | 1.13E-03 |
| 42 | GO:0006644: phospholipid metabolic process | 1.13E-03 |
| 43 | GO:0010208: pollen wall assembly | 1.29E-03 |
| 44 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.62E-03 |
| 45 | GO:0071577: zinc II ion transmembrane transport | 1.62E-03 |
| 46 | GO:0006298: mismatch repair | 1.79E-03 |
| 47 | GO:0010102: lateral root morphogenesis | 2.36E-03 |
| 48 | GO:0006108: malate metabolic process | 2.36E-03 |
| 49 | GO:0006446: regulation of translational initiation | 2.56E-03 |
| 50 | GO:0090351: seedling development | 2.76E-03 |
| 51 | GO:0009969: xyloglucan biosynthetic process | 2.76E-03 |
| 52 | GO:0034976: response to endoplasmic reticulum stress | 2.97E-03 |
| 53 | GO:0001944: vasculature development | 4.10E-03 |
| 54 | GO:0010118: stomatal movement | 4.83E-03 |
| 55 | GO:0008360: regulation of cell shape | 5.09E-03 |
| 56 | GO:0006520: cellular amino acid metabolic process | 5.09E-03 |
| 57 | GO:0048868: pollen tube development | 5.09E-03 |
| 58 | GO:0009826: unidimensional cell growth | 5.27E-03 |
| 59 | GO:0048825: cotyledon development | 5.61E-03 |
| 60 | GO:0008654: phospholipid biosynthetic process | 5.61E-03 |
| 61 | GO:0010183: pollen tube guidance | 5.61E-03 |
| 62 | GO:0010193: response to ozone | 5.88E-03 |
| 63 | GO:0009630: gravitropism | 6.15E-03 |
| 64 | GO:0010286: heat acclimation | 7.00E-03 |
| 65 | GO:0006979: response to oxidative stress | 7.53E-03 |
| 66 | GO:0045454: cell redox homeostasis | 8.11E-03 |
| 67 | GO:0009627: systemic acquired resistance | 8.19E-03 |
| 68 | GO:0006888: ER to Golgi vesicle-mediated transport | 8.50E-03 |
| 69 | GO:0009733: response to auxin | 8.63E-03 |
| 70 | GO:0009651: response to salt stress | 9.12E-03 |
| 71 | GO:0030244: cellulose biosynthetic process | 9.13E-03 |
| 72 | GO:0009832: plant-type cell wall biogenesis | 9.45E-03 |
| 73 | GO:0048767: root hair elongation | 9.45E-03 |
| 74 | GO:0009751: response to salicylic acid | 9.87E-03 |
| 75 | GO:0009867: jasmonic acid mediated signaling pathway | 1.08E-02 |
| 76 | GO:0045087: innate immune response | 1.08E-02 |
| 77 | GO:0009853: photorespiration | 1.08E-02 |
| 78 | GO:0030001: metal ion transport | 1.18E-02 |
| 79 | GO:0006631: fatty acid metabolic process | 1.22E-02 |
| 80 | GO:0051707: response to other organism | 1.29E-02 |
| 81 | GO:0006855: drug transmembrane transport | 1.44E-02 |
| 82 | GO:0006812: cation transport | 1.51E-02 |
| 83 | GO:0009846: pollen germination | 1.51E-02 |
| 84 | GO:0009736: cytokinin-activated signaling pathway | 1.59E-02 |
| 85 | GO:0006486: protein glycosylation | 1.59E-02 |
| 86 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.63E-02 |
| 87 | GO:0009626: plant-type hypersensitive response | 1.88E-02 |
| 88 | GO:0009737: response to abscisic acid | 1.95E-02 |
| 89 | GO:0009624: response to nematode | 2.04E-02 |
| 90 | GO:0018105: peptidyl-serine phosphorylation | 2.09E-02 |
| 91 | GO:0051726: regulation of cell cycle | 2.13E-02 |
| 92 | GO:0009742: brassinosteroid mediated signaling pathway | 2.13E-02 |
| 93 | GO:0009058: biosynthetic process | 2.49E-02 |
| 94 | GO:0006413: translational initiation | 2.87E-02 |
| 95 | GO:0010150: leaf senescence | 3.02E-02 |
| 96 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.12E-02 |
| 97 | GO:0009739: response to gibberellin | 3.27E-02 |
| 98 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.27E-02 |
| 99 | GO:0009414: response to water deprivation | 3.52E-02 |
| 100 | GO:0042742: defense response to bacterium | 3.61E-02 |
| 101 | GO:0009860: pollen tube growth | 4.34E-02 |
| 102 | GO:0009723: response to ethylene | 4.57E-02 |
| 103 | GO:0048366: leaf development | 4.62E-02 |
| 104 | GO:0080167: response to karrikin | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015926: glucosidase activity | 0.00E+00 |
| 2 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 3 | GO:0055105: ubiquitin-protein transferase inhibitor activity | 0.00E+00 |
| 4 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 5 | GO:0033919: glucan 1,3-alpha-glucosidase activity | 0.00E+00 |
| 6 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 5.64E-05 |
| 7 | GO:0050200: plasmalogen synthase activity | 5.64E-05 |
| 8 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 5.64E-05 |
| 9 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 5.64E-05 |
| 10 | GO:0004333: fumarate hydratase activity | 5.64E-05 |
| 11 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 5.64E-05 |
| 12 | GO:0008233: peptidase activity | 9.96E-05 |
| 13 | GO:0004534: 5'-3' exoribonuclease activity | 1.37E-04 |
| 14 | GO:0008517: folic acid transporter activity | 1.37E-04 |
| 15 | GO:0050291: sphingosine N-acyltransferase activity | 1.37E-04 |
| 16 | GO:0019781: NEDD8 activating enzyme activity | 1.37E-04 |
| 17 | GO:0003994: aconitate hydratase activity | 1.37E-04 |
| 18 | GO:0004298: threonine-type endopeptidase activity | 1.80E-04 |
| 19 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.80E-04 |
| 20 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 2.34E-04 |
| 21 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.34E-04 |
| 22 | GO:0005515: protein binding | 3.20E-04 |
| 23 | GO:0017077: oxidative phosphorylation uncoupler activity | 3.41E-04 |
| 24 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.73E-04 |
| 25 | GO:0015368: calcium:cation antiporter activity | 4.56E-04 |
| 26 | GO:0008409: 5'-3' exonuclease activity | 4.56E-04 |
| 27 | GO:0015369: calcium:proton antiporter activity | 4.56E-04 |
| 28 | GO:0004040: amidase activity | 5.78E-04 |
| 29 | GO:0016407: acetyltransferase activity | 5.78E-04 |
| 30 | GO:0008641: small protein activating enzyme activity | 5.78E-04 |
| 31 | GO:0031369: translation initiation factor binding | 7.07E-04 |
| 32 | GO:0102391: decanoate--CoA ligase activity | 8.44E-04 |
| 33 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.85E-04 |
| 34 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 9.85E-04 |
| 35 | GO:0016831: carboxy-lyase activity | 9.85E-04 |
| 36 | GO:0015491: cation:cation antiporter activity | 1.13E-03 |
| 37 | GO:0000989: transcription factor activity, transcription factor binding | 1.45E-03 |
| 38 | GO:0008417: fucosyltransferase activity | 1.45E-03 |
| 39 | GO:0045309: protein phosphorylated amino acid binding | 1.62E-03 |
| 40 | GO:0030234: enzyme regulator activity | 1.79E-03 |
| 41 | GO:0019904: protein domain specific binding | 1.97E-03 |
| 42 | GO:0008559: xenobiotic-transporting ATPase activity | 1.97E-03 |
| 43 | GO:0005385: zinc ion transmembrane transporter activity | 3.18E-03 |
| 44 | GO:0043130: ubiquitin binding | 3.18E-03 |
| 45 | GO:0003756: protein disulfide isomerase activity | 4.34E-03 |
| 46 | GO:0005524: ATP binding | 4.80E-03 |
| 47 | GO:0046873: metal ion transmembrane transporter activity | 5.09E-03 |
| 48 | GO:0016853: isomerase activity | 5.35E-03 |
| 49 | GO:0003684: damaged DNA binding | 6.71E-03 |
| 50 | GO:0050897: cobalt ion binding | 1.01E-02 |
| 51 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.18E-02 |
| 52 | GO:0003676: nucleic acid binding | 1.24E-02 |
| 53 | GO:0003729: mRNA binding | 1.24E-02 |
| 54 | GO:0005198: structural molecule activity | 1.40E-02 |
| 55 | GO:0051287: NAD binding | 1.48E-02 |
| 56 | GO:0000166: nucleotide binding | 1.78E-02 |
| 57 | GO:0016746: transferase activity, transferring acyl groups | 2.09E-02 |
| 58 | GO:0005507: copper ion binding | 2.54E-02 |
| 59 | GO:0030170: pyridoxal phosphate binding | 2.58E-02 |
| 60 | GO:0004252: serine-type endopeptidase activity | 2.58E-02 |
| 61 | GO:0003743: translation initiation factor activity | 3.37E-02 |
| 62 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.58E-02 |
| 63 | GO:0046982: protein heterodimerization activity | 4.06E-02 |
| 64 | GO:0043531: ADP binding | 4.40E-02 |
| 65 | GO:0050660: flavin adenine dinucleotide binding | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008305: integrin complex | 0.00E+00 |
| 2 | GO:0005829: cytosol | 6.02E-07 |
| 3 | GO:0000502: proteasome complex | 4.72E-06 |
| 4 | GO:0005783: endoplasmic reticulum | 2.88E-05 |
| 5 | GO:0045239: tricarboxylic acid cycle enzyme complex | 5.64E-05 |
| 6 | GO:0005839: proteasome core complex | 1.80E-04 |
| 7 | GO:0046861: glyoxysomal membrane | 2.34E-04 |
| 8 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 3.41E-04 |
| 9 | GO:0005844: polysome | 4.56E-04 |
| 10 | GO:0005774: vacuolar membrane | 5.89E-04 |
| 11 | GO:0016282: eukaryotic 43S preinitiation complex | 7.07E-04 |
| 12 | GO:0033290: eukaryotic 48S preinitiation complex | 8.44E-04 |
| 13 | GO:0009514: glyoxysome | 1.29E-03 |
| 14 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.29E-03 |
| 15 | GO:0010494: cytoplasmic stress granule | 1.45E-03 |
| 16 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.62E-03 |
| 17 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.97E-03 |
| 18 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.97E-03 |
| 19 | GO:0016592: mediator complex | 6.15E-03 |
| 20 | GO:0032580: Golgi cisterna membrane | 6.71E-03 |
| 21 | GO:0000932: P-body | 7.59E-03 |
| 22 | GO:0005788: endoplasmic reticulum lumen | 7.89E-03 |
| 23 | GO:0009506: plasmodesma | 8.22E-03 |
| 24 | GO:0000325: plant-type vacuole | 1.01E-02 |
| 25 | GO:0005737: cytoplasm | 1.08E-02 |
| 26 | GO:0005789: endoplasmic reticulum membrane | 1.28E-02 |
| 27 | GO:0090406: pollen tube | 1.29E-02 |
| 28 | GO:0005794: Golgi apparatus | 1.48E-02 |
| 29 | GO:0016021: integral component of membrane | 1.60E-02 |
| 30 | GO:0022626: cytosolic ribosome | 1.70E-02 |
| 31 | GO:0005747: mitochondrial respiratory chain complex I | 1.83E-02 |
| 32 | GO:0005834: heterotrimeric G-protein complex | 1.88E-02 |
| 33 | GO:0005759: mitochondrial matrix | 2.82E-02 |
| 34 | GO:0009705: plant-type vacuole membrane | 3.02E-02 |
| 35 | GO:0005618: cell wall | 4.21E-02 |
| 36 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.40E-02 |