co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G19400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045721: negative regulation of gluconeogenesis	0.00E+00
2	GO:0046085: adenosine metabolic process	0.00E+00
3	GO:0007178: transmembrane receptor protein serine/threonine kinase signaling pathway	0.00E+00
4	GO:0071712: ER-associated misfolded protein catabolic process	1.07E-04
5	GO:0046417: chorismate metabolic process	1.84E-04
6	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	1.84E-04
7	GO:0034613: cellular protein localization	3.64E-04
8	GO:0006749: glutathione metabolic process	3.64E-04
9	GO:0006014: D-ribose metabolic process	5.67E-04
10	GO:0051568: histone H3-K4 methylation	5.67E-04
11	GO:0045962: positive regulation of development, heterochronic	5.67E-04
12	GO:0000741: karyogamy	5.67E-04
13	GO:0009099: valine biosynthetic process	6.76E-04
14	GO:0010928: regulation of auxin mediated signaling pathway	9.08E-04
15	GO:0042255: ribosome assembly	9.08E-04
16	GO:0032259: methylation	9.15E-04
17	GO:0009097: isoleucine biosynthetic process	1.03E-03
18	GO:0010100: negative regulation of photomorphogenesis	1.03E-03
19	GO:0009098: leucine biosynthetic process	1.29E-03
20	GO:0009073: aromatic amino acid family biosynthetic process	1.57E-03
21	GO:0034976: response to endoplasmic reticulum stress	2.36E-03
22	GO:0016575: histone deacetylation	2.70E-03
23	GO:0016226: iron-sulfur cluster assembly	3.06E-03
24	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.63E-03
25	GO:0009958: positive gravitropism	4.02E-03
26	GO:0010197: polar nucleus fusion	4.02E-03
27	GO:0048544: recognition of pollen	4.23E-03
28	GO:0032502: developmental process	4.86E-03
29	GO:0007264: small GTPase mediated signal transduction	4.86E-03
30	GO:0016579: protein deubiquitination	5.75E-03
31	GO:0006499: N-terminal protein myristoylation	7.69E-03
32	GO:0009407: toxin catabolic process	7.69E-03
33	GO:0000154: rRNA modification	1.10E-02
34	GO:0009636: response to toxic substance	1.10E-02
35	GO:0009965: leaf morphogenesis	1.10E-02
36	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.16E-02
37	GO:0009585: red, far-red light phototransduction	1.25E-02
38	GO:0051603: proteolysis involved in cellular protein catabolic process	1.28E-02
39	GO:0006396: RNA processing	1.64E-02
40	GO:0009451: RNA modification	2.40E-02
41	GO:0008380: RNA splicing	2.68E-02
42	GO:0009658: chloroplast organization	3.22E-02
43	GO:0006970: response to osmotic stress	3.40E-02
44	GO:0048366: leaf development	3.62E-02
45	GO:0080167: response to karrikin	3.76E-02
46	GO:0005975: carbohydrate metabolic process	3.87E-02
47	GO:0046777: protein autophosphorylation	3.94E-02
48	GO:0045454: cell redox homeostasis	4.27E-02
49	GO:0016042: lipid catabolic process	4.85E-02
50	GO:0009751: response to salicylic acid	4.90E-02
51	GO:0006281: DNA repair	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004106: chorismate mutase activity	1.07E-04
2	GO:0044390: ubiquitin-like protein conjugating enzyme binding	1.07E-04
3	GO:0015929: hexosaminidase activity	1.07E-04
4	GO:0004563: beta-N-acetylhexosaminidase activity	1.07E-04
5	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.07E-04
6	GO:0008649: rRNA methyltransferase activity	1.84E-04
7	GO:0019003: GDP binding	1.84E-04
8	GO:0052656: L-isoleucine transaminase activity	2.70E-04
9	GO:0052654: L-leucine transaminase activity	2.70E-04
10	GO:0052655: L-valine transaminase activity	2.70E-04
11	GO:0009044: xylan 1,4-beta-xylosidase activity	3.64E-04
12	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	3.64E-04
13	GO:0004084: branched-chain-amino-acid transaminase activity	3.64E-04
14	GO:0008168: methyltransferase activity	4.33E-04
15	GO:0004747: ribokinase activity	6.76E-04
16	GO:0004525: ribonuclease III activity	9.08E-04
17	GO:0001055: RNA polymerase II activity	1.29E-03
18	GO:0008047: enzyme activator activity	1.43E-03
19	GO:0004864: protein phosphatase inhibitor activity	1.43E-03
20	GO:0001054: RNA polymerase I activity	1.57E-03
21	GO:0001056: RNA polymerase III activity	1.72E-03
22	GO:0008131: primary amine oxidase activity	2.03E-03
23	GO:0035251: UDP-glucosyltransferase activity	2.88E-03
24	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.88E-03
25	GO:0003756: protein disulfide isomerase activity	3.43E-03
26	GO:0003727: single-stranded RNA binding	3.43E-03
27	GO:0004872: receptor activity	4.43E-03
28	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.64E-03
29	GO:0008375: acetylglucosaminyltransferase activity	6.45E-03
30	GO:0004806: triglyceride lipase activity	6.69E-03
31	GO:0004712: protein serine/threonine/tyrosine kinase activity	9.01E-03
32	GO:0004364: glutathione transferase activity	9.83E-03
33	GO:0004185: serine-type carboxypeptidase activity	1.01E-02
34	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.25E-02
35	GO:0031625: ubiquitin protein ligase binding	1.34E-02
36	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.66E-02
37	GO:0008026: ATP-dependent helicase activity	1.67E-02
38	GO:0019843: rRNA binding	1.88E-02
39	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.25E-02
40	GO:0003824: catalytic activity	2.81E-02
41	GO:0043531: ADP binding	3.44E-02
42	GO:0004672: protein kinase activity	3.75E-02
43	GO:0004871: signal transducer activity	4.41E-02
44	GO:0003924: GTPase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0030427: site of polarized growth	0.00E+00
2	GO:0036513: Derlin-1 retrotranslocation complex	2.70E-04
3	GO:0031011: Ino80 complex	4.63E-04
4	GO:0005578: proteinaceous extracellular matrix	1.87E-03
5	GO:0000419: DNA-directed RNA polymerase V complex	2.36E-03
6	GO:0005819: spindle	9.01E-03
7	GO:0005615: extracellular space	2.56E-02
8	GO:0046658: anchored component of plasma membrane	2.88E-02