GO Enrichment Analysis of Co-expressed Genes with
AT3G19360
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006364: rRNA processing | 1.06E-05 |
| 2 | GO:0071277: cellular response to calcium ion | 1.67E-05 |
| 3 | GO:0006446: regulation of translational initiation | 1.68E-05 |
| 4 | GO:0006413: translational initiation | 4.07E-05 |
| 5 | GO:0006611: protein export from nucleus | 4.35E-05 |
| 6 | GO:0000055: ribosomal large subunit export from nucleus | 7.77E-05 |
| 7 | GO:0010366: negative regulation of ethylene biosynthetic process | 7.77E-05 |
| 8 | GO:0070475: rRNA base methylation | 7.77E-05 |
| 9 | GO:0051131: chaperone-mediated protein complex assembly | 1.17E-04 |
| 10 | GO:0033320: UDP-D-xylose biosynthetic process | 1.61E-04 |
| 11 | GO:0007029: endoplasmic reticulum organization | 2.09E-04 |
| 12 | GO:0001731: formation of translation preinitiation complex | 2.59E-04 |
| 13 | GO:0000470: maturation of LSU-rRNA | 2.59E-04 |
| 14 | GO:0042732: D-xylose metabolic process | 2.59E-04 |
| 15 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 5.42E-04 |
| 16 | GO:0006349: regulation of gene expression by genetic imprinting | 6.04E-04 |
| 17 | GO:0006457: protein folding | 6.10E-04 |
| 18 | GO:0010015: root morphogenesis | 7.34E-04 |
| 19 | GO:0009225: nucleotide-sugar metabolic process | 1.01E-03 |
| 20 | GO:0030150: protein import into mitochondrial matrix | 1.16E-03 |
| 21 | GO:0043622: cortical microtubule organization | 1.23E-03 |
| 22 | GO:0031348: negative regulation of defense response | 1.39E-03 |
| 23 | GO:0009561: megagametogenesis | 1.56E-03 |
| 24 | GO:0009960: endosperm development | 1.82E-03 |
| 25 | GO:0009408: response to heat | 2.18E-03 |
| 26 | GO:0019760: glucosinolate metabolic process | 2.38E-03 |
| 27 | GO:0009615: response to virus | 2.68E-03 |
| 28 | GO:0010311: lateral root formation | 3.31E-03 |
| 29 | GO:0009834: plant-type secondary cell wall biogenesis | 3.42E-03 |
| 30 | GO:0045087: innate immune response | 3.76E-03 |
| 31 | GO:0008283: cell proliferation | 4.47E-03 |
| 32 | GO:0009965: leaf morphogenesis | 4.83E-03 |
| 33 | GO:0006417: regulation of translation | 5.88E-03 |
| 34 | GO:0009553: embryo sac development | 6.84E-03 |
| 35 | GO:0009845: seed germination | 8.63E-03 |
| 36 | GO:0009451: RNA modification | 1.04E-02 |
| 37 | GO:0007049: cell cycle | 1.51E-02 |
| 38 | GO:0080167: response to karrikin | 1.62E-02 |
| 39 | GO:0032259: methylation | 2.07E-02 |
| 40 | GO:0051301: cell division | 3.42E-02 |
| 41 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.01E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102118: gibberellin A4 carboxyl methyltransferase activity | 0.00E+00 |
| 2 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 1.67E-05 |
| 3 | GO:0010341: gibberellin carboxyl-O-methyltransferase activity | 1.67E-05 |
| 4 | GO:0003743: translation initiation factor activity | 5.77E-05 |
| 5 | GO:0043023: ribosomal large subunit binding | 1.17E-04 |
| 6 | GO:0002020: protease binding | 2.09E-04 |
| 7 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.59E-04 |
| 8 | GO:0070403: NAD+ binding | 3.11E-04 |
| 9 | GO:0003723: RNA binding | 6.24E-04 |
| 10 | GO:0018024: histone-lysine N-methyltransferase activity | 1.64E-03 |
| 11 | GO:0001085: RNA polymerase II transcription factor binding | 1.82E-03 |
| 12 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.09E-03 |
| 13 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.53E-03 |
| 14 | GO:0000166: nucleotide binding | 3.83E-03 |
| 15 | GO:0051082: unfolded protein binding | 6.99E-03 |
| 16 | GO:0008026: ATP-dependent helicase activity | 7.28E-03 |
| 17 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 8.94E-03 |
| 18 | GO:0046982: protein heterodimerization activity | 1.37E-02 |
| 19 | GO:0003682: chromatin binding | 1.45E-02 |
| 20 | GO:0004519: endonuclease activity | 2.27E-02 |
| 21 | GO:0005524: ATP binding | 3.78E-02 |
| 22 | GO:0005525: GTP binding | 4.59E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 1.62E-06 |
| 2 | GO:0030688: preribosome, small subunit precursor | 1.67E-05 |
| 3 | GO:0016282: eukaryotic 43S preinitiation complex | 2.59E-04 |
| 4 | GO:0033290: eukaryotic 48S preinitiation complex | 3.11E-04 |
| 5 | GO:0016363: nuclear matrix | 3.11E-04 |
| 6 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.34E-04 |
| 7 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.56E-03 |
| 8 | GO:0005829: cytosol | 1.95E-03 |
| 9 | GO:0005694: chromosome | 2.18E-03 |
| 10 | GO:0032580: Golgi cisterna membrane | 2.38E-03 |
| 11 | GO:0005667: transcription factor complex | 2.88E-03 |
| 12 | GO:0000786: nucleosome | 3.64E-03 |
| 13 | GO:0005634: nucleus | 1.35E-02 |
| 14 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.49E-02 |
| 15 | GO:0005743: mitochondrial inner membrane | 2.03E-02 |
| 16 | GO:0005774: vacuolar membrane | 2.69E-02 |
| 17 | GO:0022626: cytosolic ribosome | 3.12E-02 |
| 18 | GO:0005794: Golgi apparatus | 4.00E-02 |
| 19 | GO:0005773: vacuole | 4.12E-02 |
| 20 | GO:0005802: trans-Golgi network | 4.51E-02 |
| 21 | GO:0005768: endosome | 4.94E-02 |