GO Enrichment Analysis of Co-expressed Genes with
AT3G18760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043461: proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 2 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 3 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 4 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 5 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 6 | GO:0006412: translation | 9.12E-120 |
| 7 | GO:0042254: ribosome biogenesis | 1.42E-45 |
| 8 | GO:0000027: ribosomal large subunit assembly | 1.48E-14 |
| 9 | GO:0006626: protein targeting to mitochondrion | 9.16E-08 |
| 10 | GO:0009735: response to cytokinin | 1.40E-07 |
| 11 | GO:0000028: ribosomal small subunit assembly | 2.87E-07 |
| 12 | GO:0006458: 'de novo' protein folding | 8.25E-06 |
| 13 | GO:0009955: adaxial/abaxial pattern specification | 8.25E-06 |
| 14 | GO:0009967: positive regulation of signal transduction | 8.28E-06 |
| 15 | GO:0045041: protein import into mitochondrial intermembrane space | 8.28E-06 |
| 16 | GO:0006364: rRNA processing | 1.29E-05 |
| 17 | GO:1902626: assembly of large subunit precursor of preribosome | 2.85E-05 |
| 18 | GO:0002181: cytoplasmic translation | 2.85E-05 |
| 19 | GO:0045039: protein import into mitochondrial inner membrane | 2.85E-05 |
| 20 | GO:0031167: rRNA methylation | 1.68E-04 |
| 21 | GO:0030150: protein import into mitochondrial matrix | 2.35E-04 |
| 22 | GO:0061077: chaperone-mediated protein folding | 3.07E-04 |
| 23 | GO:0042026: protein refolding | 3.21E-04 |
| 24 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.32E-04 |
| 25 | GO:0006407: rRNA export from nucleus | 4.32E-04 |
| 26 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 4.32E-04 |
| 27 | GO:0015801: aromatic amino acid transport | 4.32E-04 |
| 28 | GO:0030490: maturation of SSU-rRNA | 4.32E-04 |
| 29 | GO:0006434: seryl-tRNA aminoacylation | 4.32E-04 |
| 30 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.32E-04 |
| 31 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 5.18E-04 |
| 32 | GO:0008033: tRNA processing | 5.36E-04 |
| 33 | GO:0001510: RNA methylation | 6.32E-04 |
| 34 | GO:0046686: response to cadmium ion | 6.68E-04 |
| 35 | GO:0051788: response to misfolded protein | 9.33E-04 |
| 36 | GO:0015786: UDP-glucose transport | 9.33E-04 |
| 37 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 9.33E-04 |
| 38 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 9.33E-04 |
| 39 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 9.33E-04 |
| 40 | GO:0048569: post-embryonic animal organ development | 9.33E-04 |
| 41 | GO:0006820: anion transport | 1.36E-03 |
| 42 | GO:0032940: secretion by cell | 1.52E-03 |
| 43 | GO:0006954: inflammatory response | 1.52E-03 |
| 44 | GO:0009150: purine ribonucleotide metabolic process | 1.52E-03 |
| 45 | GO:0015783: GDP-fucose transport | 1.52E-03 |
| 46 | GO:0010476: gibberellin mediated signaling pathway | 1.52E-03 |
| 47 | GO:0042256: mature ribosome assembly | 1.52E-03 |
| 48 | GO:0006241: CTP biosynthetic process | 2.19E-03 |
| 49 | GO:0072334: UDP-galactose transmembrane transport | 2.19E-03 |
| 50 | GO:0006165: nucleoside diphosphate phosphorylation | 2.19E-03 |
| 51 | GO:0006228: UTP biosynthetic process | 2.19E-03 |
| 52 | GO:0006164: purine nucleotide biosynthetic process | 2.19E-03 |
| 53 | GO:0009647: skotomorphogenesis | 2.19E-03 |
| 54 | GO:0009855: determination of bilateral symmetry | 2.19E-03 |
| 55 | GO:0032981: mitochondrial respiratory chain complex I assembly | 2.19E-03 |
| 56 | GO:0046513: ceramide biosynthetic process | 2.19E-03 |
| 57 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 2.19E-03 |
| 58 | GO:0070301: cellular response to hydrogen peroxide | 2.19E-03 |
| 59 | GO:0006414: translational elongation | 2.71E-03 |
| 60 | GO:0042273: ribosomal large subunit biogenesis | 2.95E-03 |
| 61 | GO:0051205: protein insertion into membrane | 2.95E-03 |
| 62 | GO:0009165: nucleotide biosynthetic process | 2.95E-03 |
| 63 | GO:0042274: ribosomal small subunit biogenesis | 2.95E-03 |
| 64 | GO:0006183: GTP biosynthetic process | 2.95E-03 |
| 65 | GO:0006413: translational initiation | 2.99E-03 |
| 66 | GO:0008283: cell proliferation | 3.21E-03 |
| 67 | GO:0071215: cellular response to abscisic acid stimulus | 3.51E-03 |
| 68 | GO:0036065: fucosylation | 3.78E-03 |
| 69 | GO:0006461: protein complex assembly | 3.78E-03 |
| 70 | GO:0000413: protein peptidyl-prolyl isomerization | 4.48E-03 |
| 71 | GO:0016554: cytidine to uridine editing | 4.68E-03 |
| 72 | GO:0016070: RNA metabolic process | 4.68E-03 |
| 73 | GO:0000470: maturation of LSU-rRNA | 4.68E-03 |
| 74 | GO:0043248: proteasome assembly | 4.68E-03 |
| 75 | GO:0009651: response to salt stress | 5.52E-03 |
| 76 | GO:0009749: response to glucose | 5.57E-03 |
| 77 | GO:0009612: response to mechanical stimulus | 5.64E-03 |
| 78 | GO:0000245: spliceosomal complex assembly | 5.64E-03 |
| 79 | GO:0016444: somatic cell DNA recombination | 5.64E-03 |
| 80 | GO:1901001: negative regulation of response to salt stress | 5.64E-03 |
| 81 | GO:0080156: mitochondrial mRNA modification | 5.97E-03 |
| 82 | GO:0080186: developmental vegetative growth | 6.67E-03 |
| 83 | GO:0048528: post-embryonic root development | 6.67E-03 |
| 84 | GO:0006605: protein targeting | 7.76E-03 |
| 85 | GO:0050821: protein stabilization | 7.76E-03 |
| 86 | GO:0031540: regulation of anthocyanin biosynthetic process | 7.76E-03 |
| 87 | GO:0000398: mRNA splicing, via spliceosome | 8.86E-03 |
| 88 | GO:0001558: regulation of cell growth | 8.91E-03 |
| 89 | GO:0006367: transcription initiation from RNA polymerase II promoter | 8.91E-03 |
| 90 | GO:0010204: defense response signaling pathway, resistance gene-independent | 8.91E-03 |
| 91 | GO:0009245: lipid A biosynthetic process | 1.01E-02 |
| 92 | GO:0048507: meristem development | 1.01E-02 |
| 93 | GO:0006189: 'de novo' IMP biosynthetic process | 1.01E-02 |
| 94 | GO:0098656: anion transmembrane transport | 1.01E-02 |
| 95 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.14E-02 |
| 96 | GO:0043067: regulation of programmed cell death | 1.14E-02 |
| 97 | GO:0000387: spliceosomal snRNP assembly | 1.14E-02 |
| 98 | GO:0010162: seed dormancy process | 1.27E-02 |
| 99 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 1.27E-02 |
| 100 | GO:0010043: response to zinc ion | 1.31E-02 |
| 101 | GO:0006913: nucleocytoplasmic transport | 1.41E-02 |
| 102 | GO:0010015: root morphogenesis | 1.41E-02 |
| 103 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 1.55E-02 |
| 104 | GO:0006790: sulfur compound metabolic process | 1.55E-02 |
| 105 | GO:0010102: lateral root morphogenesis | 1.70E-02 |
| 106 | GO:0002237: response to molecule of bacterial origin | 1.85E-02 |
| 107 | GO:0006446: regulation of translational initiation | 1.85E-02 |
| 108 | GO:0048467: gynoecium development | 1.85E-02 |
| 109 | GO:0009644: response to high light intensity | 2.01E-02 |
| 110 | GO:0090351: seedling development | 2.01E-02 |
| 111 | GO:0009969: xyloglucan biosynthetic process | 2.01E-02 |
| 112 | GO:0009965: leaf morphogenesis | 2.09E-02 |
| 113 | GO:0034976: response to endoplasmic reticulum stress | 2.17E-02 |
| 114 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.33E-02 |
| 115 | GO:0006289: nucleotide-excision repair | 2.33E-02 |
| 116 | GO:0009116: nucleoside metabolic process | 2.33E-02 |
| 117 | GO:0015031: protein transport | 2.37E-02 |
| 118 | GO:0051302: regulation of cell division | 2.50E-02 |
| 119 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.60E-02 |
| 120 | GO:0003333: amino acid transmembrane transport | 2.68E-02 |
| 121 | GO:0006334: nucleosome assembly | 2.68E-02 |
| 122 | GO:0007005: mitochondrion organization | 2.85E-02 |
| 123 | GO:0009294: DNA mediated transformation | 3.04E-02 |
| 124 | GO:0040007: growth | 3.04E-02 |
| 125 | GO:0009793: embryo development ending in seed dormancy | 3.09E-02 |
| 126 | GO:0042147: retrograde transport, endosome to Golgi | 3.41E-02 |
| 127 | GO:0009960: endosperm development | 3.81E-02 |
| 128 | GO:0010197: polar nucleus fusion | 3.81E-02 |
| 129 | GO:0048825: cotyledon development | 4.21E-02 |
| 130 | GO:0006891: intra-Golgi vesicle-mediated transport | 4.42E-02 |
| 131 | GO:0006635: fatty acid beta-oxidation | 4.42E-02 |
| 132 | GO:0009845: seed germination | 4.82E-02 |
| 133 | GO:0030163: protein catabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 2 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 3 | GO:0052873: FMN reductase (NADPH) activity | 0.00E+00 |
| 4 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 5 | GO:0008752: FMN reductase activity | 0.00E+00 |
| 6 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 7 | GO:0003735: structural constituent of ribosome | 4.22E-145 |
| 8 | GO:0003729: mRNA binding | 1.23E-34 |
| 9 | GO:0019843: rRNA binding | 3.23E-12 |
| 10 | GO:0003746: translation elongation factor activity | 1.16E-07 |
| 11 | GO:0044183: protein binding involved in protein folding | 2.43E-06 |
| 12 | GO:0005078: MAP-kinase scaffold activity | 8.28E-06 |
| 13 | GO:0030515: snoRNA binding | 1.31E-05 |
| 14 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.18E-05 |
| 15 | GO:0008649: rRNA methyltransferase activity | 2.85E-05 |
| 16 | GO:0008097: 5S rRNA binding | 6.19E-05 |
| 17 | GO:0004656: procollagen-proline 4-dioxygenase activity | 3.21E-04 |
| 18 | GO:0004828: serine-tRNA ligase activity | 4.32E-04 |
| 19 | GO:0005080: protein kinase C binding | 4.32E-04 |
| 20 | GO:0035614: snRNA stem-loop binding | 4.32E-04 |
| 21 | GO:0015288: porin activity | 5.18E-04 |
| 22 | GO:0003723: RNA binding | 5.23E-04 |
| 23 | GO:0008308: voltage-gated anion channel activity | 6.32E-04 |
| 24 | GO:0001055: RNA polymerase II activity | 8.92E-04 |
| 25 | GO:0008805: carbon-monoxide oxygenase activity | 9.33E-04 |
| 26 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 9.33E-04 |
| 27 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 9.33E-04 |
| 28 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 9.33E-04 |
| 29 | GO:0030619: U1 snRNA binding | 9.33E-04 |
| 30 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 9.33E-04 |
| 31 | GO:0050291: sphingosine N-acyltransferase activity | 9.33E-04 |
| 32 | GO:0004618: phosphoglycerate kinase activity | 9.33E-04 |
| 33 | GO:0015173: aromatic amino acid transmembrane transporter activity | 9.33E-04 |
| 34 | GO:0001054: RNA polymerase I activity | 1.19E-03 |
| 35 | GO:0001056: RNA polymerase III activity | 1.36E-03 |
| 36 | GO:0051082: unfolded protein binding | 1.44E-03 |
| 37 | GO:0032947: protein complex scaffold | 1.52E-03 |
| 38 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.52E-03 |
| 39 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.52E-03 |
| 40 | GO:0008469: histone-arginine N-methyltransferase activity | 1.52E-03 |
| 41 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.52E-03 |
| 42 | GO:0050897: cobalt ion binding | 2.06E-03 |
| 43 | GO:0005460: UDP-glucose transmembrane transporter activity | 2.19E-03 |
| 44 | GO:0004550: nucleoside diphosphate kinase activity | 2.19E-03 |
| 45 | GO:0047627: adenylylsulfatase activity | 2.19E-03 |
| 46 | GO:0004749: ribose phosphate diphosphokinase activity | 2.19E-03 |
| 47 | GO:0008233: peptidase activity | 2.21E-03 |
| 48 | GO:0031418: L-ascorbic acid binding | 2.42E-03 |
| 49 | GO:0004298: threonine-type endopeptidase activity | 2.94E-03 |
| 50 | GO:0070628: proteasome binding | 2.95E-03 |
| 51 | GO:0016004: phospholipase activator activity | 2.95E-03 |
| 52 | GO:0005275: amine transmembrane transporter activity | 3.78E-03 |
| 53 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.78E-03 |
| 54 | GO:0000166: nucleotide binding | 3.80E-03 |
| 55 | GO:0031593: polyubiquitin binding | 4.68E-03 |
| 56 | GO:0031177: phosphopantetheine binding | 4.68E-03 |
| 57 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.68E-03 |
| 58 | GO:0010181: FMN binding | 5.19E-03 |
| 59 | GO:0000035: acyl binding | 5.64E-03 |
| 60 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 6.67E-03 |
| 61 | GO:0008235: metalloexopeptidase activity | 6.67E-03 |
| 62 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 7.76E-03 |
| 63 | GO:0043022: ribosome binding | 7.76E-03 |
| 64 | GO:0005525: GTP binding | 1.01E-02 |
| 65 | GO:0008417: fucosyltransferase activity | 1.01E-02 |
| 66 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.44E-02 |
| 67 | GO:0015266: protein channel activity | 1.70E-02 |
| 68 | GO:0003743: translation initiation factor activity | 1.81E-02 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.17E-02 |
| 70 | GO:0004407: histone deacetylase activity | 2.33E-02 |
| 71 | GO:0043130: ubiquitin binding | 2.33E-02 |
| 72 | GO:0051087: chaperone binding | 2.50E-02 |
| 73 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.51E-02 |
| 74 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.68E-02 |
| 75 | GO:0003756: protein disulfide isomerase activity | 3.22E-02 |
| 76 | GO:0008514: organic anion transmembrane transporter activity | 3.22E-02 |
| 77 | GO:0004812: aminoacyl-tRNA ligase activity | 3.41E-02 |
| 78 | GO:0005515: protein binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 3 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 4 | GO:0005674: transcription factor TFIIF complex | 0.00E+00 |
| 5 | GO:0022626: cytosolic ribosome | 1.73E-94 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 2.22E-94 |
| 7 | GO:0005840: ribosome | 3.21E-94 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 1.72E-62 |
| 9 | GO:0005829: cytosol | 2.38E-41 |
| 10 | GO:0005730: nucleolus | 1.69E-37 |
| 11 | GO:0005737: cytoplasm | 2.84E-31 |
| 12 | GO:0009506: plasmodesma | 1.03E-28 |
| 13 | GO:0005774: vacuolar membrane | 1.62E-24 |
| 14 | GO:0015934: large ribosomal subunit | 4.53E-19 |
| 15 | GO:0005773: vacuole | 2.29E-12 |
| 16 | GO:0016020: membrane | 3.27E-12 |
| 17 | GO:0015935: small ribosomal subunit | 3.59E-12 |
| 18 | GO:0005618: cell wall | 3.25E-11 |
| 19 | GO:0005886: plasma membrane | 9.98E-08 |
| 20 | GO:0009507: chloroplast | 4.54E-07 |
| 21 | GO:0031428: box C/D snoRNP complex | 4.82E-06 |
| 22 | GO:0032040: small-subunit processome | 1.00E-04 |
| 23 | GO:0005758: mitochondrial intermembrane space | 2.35E-04 |
| 24 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.13E-04 |
| 25 | GO:0030686: 90S preribosome | 4.32E-04 |
| 26 | GO:0046930: pore complex | 6.32E-04 |
| 27 | GO:0005736: DNA-directed RNA polymerase I complex | 7.56E-04 |
| 28 | GO:0005666: DNA-directed RNA polymerase III complex | 8.92E-04 |
| 29 | GO:0015030: Cajal body | 8.92E-04 |
| 30 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.04E-03 |
| 31 | GO:0005743: mitochondrial inner membrane | 1.05E-03 |
| 32 | GO:0005681: spliceosomal complex | 1.09E-03 |
| 33 | GO:0005834: heterotrimeric G-protein complex | 1.20E-03 |
| 34 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.36E-03 |
| 35 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.52E-03 |
| 36 | GO:0019013: viral nucleocapsid | 1.55E-03 |
| 37 | GO:0005741: mitochondrial outer membrane | 2.94E-03 |
| 38 | GO:0005839: proteasome core complex | 2.94E-03 |
| 39 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.82E-03 |
| 40 | GO:0005851: eukaryotic translation initiation factor 2B complex | 4.68E-03 |
| 41 | GO:0000974: Prp19 complex | 4.68E-03 |
| 42 | GO:0000502: proteasome complex | 4.70E-03 |
| 43 | GO:0016272: prefoldin complex | 5.64E-03 |
| 44 | GO:0005747: mitochondrial respiratory chain complex I | 6.06E-03 |
| 45 | GO:0005688: U6 snRNP | 7.76E-03 |
| 46 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 8.91E-03 |
| 47 | GO:0005742: mitochondrial outer membrane translocase complex | 8.91E-03 |
| 48 | GO:0000326: protein storage vacuole | 8.91E-03 |
| 49 | GO:0005685: U1 snRNP | 1.01E-02 |
| 50 | GO:0005794: Golgi apparatus | 1.11E-02 |
| 51 | GO:0071011: precatalytic spliceosome | 1.14E-02 |
| 52 | GO:0005622: intracellular | 1.17E-02 |
| 53 | GO:0005759: mitochondrial matrix | 1.32E-02 |
| 54 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.41E-02 |
| 55 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.41E-02 |
| 56 | GO:0071013: catalytic step 2 spliceosome | 1.41E-02 |
| 57 | GO:0000419: DNA-directed RNA polymerase V complex | 2.17E-02 |
| 58 | GO:0070469: respiratory chain | 2.50E-02 |
| 59 | GO:0005739: mitochondrion | 3.66E-02 |
| 60 | GO:0016592: mediator complex | 4.63E-02 |