GO Enrichment Analysis of Co-expressed Genes with
AT3G17970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0006412: translation | 3.54E-14 |
| 3 | GO:0048569: post-embryonic animal organ development | 1.46E-07 |
| 4 | GO:0006434: seryl-tRNA aminoacylation | 4.88E-05 |
| 5 | GO:0019877: diaminopimelate biosynthetic process | 4.88E-05 |
| 6 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 4.88E-05 |
| 7 | GO:0035266: meristem growth | 4.88E-05 |
| 8 | GO:0009967: positive regulation of signal transduction | 1.20E-04 |
| 9 | GO:0006435: threonyl-tRNA aminoacylation | 1.20E-04 |
| 10 | GO:0045859: regulation of protein kinase activity | 1.20E-04 |
| 11 | GO:0045039: protein import into mitochondrial inner membrane | 2.06E-04 |
| 12 | GO:0010476: gibberellin mediated signaling pathway | 2.06E-04 |
| 13 | GO:0006413: translational initiation | 2.91E-04 |
| 14 | GO:0046513: ceramide biosynthetic process | 3.01E-04 |
| 15 | GO:0030163: protein catabolic process | 3.54E-04 |
| 16 | GO:0051205: protein insertion into membrane | 4.04E-04 |
| 17 | GO:0046686: response to cadmium ion | 4.27E-04 |
| 18 | GO:0019408: dolichol biosynthetic process | 5.13E-04 |
| 19 | GO:0006461: protein complex assembly | 5.13E-04 |
| 20 | GO:0042254: ribosome biogenesis | 5.70E-04 |
| 21 | GO:0000470: maturation of LSU-rRNA | 6.29E-04 |
| 22 | GO:0001731: formation of translation preinitiation complex | 6.29E-04 |
| 23 | GO:0009955: adaxial/abaxial pattern specification | 7.50E-04 |
| 24 | GO:0006458: 'de novo' protein folding | 7.50E-04 |
| 25 | GO:0000245: spliceosomal complex assembly | 7.50E-04 |
| 26 | GO:0000338: protein deneddylation | 8.75E-04 |
| 27 | GO:0009645: response to low light intensity stimulus | 8.75E-04 |
| 28 | GO:0001558: regulation of cell growth | 1.14E-03 |
| 29 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.14E-03 |
| 30 | GO:0043562: cellular response to nitrogen levels | 1.14E-03 |
| 31 | GO:0010208: pollen wall assembly | 1.14E-03 |
| 32 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.43E-03 |
| 33 | GO:0010449: root meristem growth | 1.43E-03 |
| 34 | GO:0010162: seed dormancy process | 1.59E-03 |
| 35 | GO:0006259: DNA metabolic process | 1.59E-03 |
| 36 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.75E-03 |
| 37 | GO:0006820: anion transport | 1.91E-03 |
| 38 | GO:2000012: regulation of auxin polar transport | 2.08E-03 |
| 39 | GO:0006626: protein targeting to mitochondrion | 2.08E-03 |
| 40 | GO:0009735: response to cytokinin | 2.15E-03 |
| 41 | GO:0006446: regulation of translational initiation | 2.26E-03 |
| 42 | GO:0000027: ribosomal large subunit assembly | 2.81E-03 |
| 43 | GO:0030150: protein import into mitochondrial matrix | 2.81E-03 |
| 44 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.81E-03 |
| 45 | GO:0006487: protein N-linked glycosylation | 2.81E-03 |
| 46 | GO:0051302: regulation of cell division | 3.01E-03 |
| 47 | GO:0010073: meristem maintenance | 3.01E-03 |
| 48 | GO:0061077: chaperone-mediated protein folding | 3.20E-03 |
| 49 | GO:0071215: cellular response to abscisic acid stimulus | 3.61E-03 |
| 50 | GO:0009294: DNA mediated transformation | 3.61E-03 |
| 51 | GO:0051028: mRNA transport | 4.04E-03 |
| 52 | GO:0008033: tRNA processing | 4.26E-03 |
| 53 | GO:0010305: leaf vascular tissue pattern formation | 4.48E-03 |
| 54 | GO:0010183: pollen tube guidance | 4.94E-03 |
| 55 | GO:0009749: response to glucose | 4.94E-03 |
| 56 | GO:0016579: protein deubiquitination | 6.42E-03 |
| 57 | GO:0045892: negative regulation of transcription, DNA-templated | 6.85E-03 |
| 58 | GO:0042128: nitrate assimilation | 7.20E-03 |
| 59 | GO:0010311: lateral root formation | 8.31E-03 |
| 60 | GO:0006811: ion transport | 8.60E-03 |
| 61 | GO:0010043: response to zinc ion | 8.88E-03 |
| 62 | GO:0009640: photomorphogenesis | 1.13E-02 |
| 63 | GO:0009744: response to sucrose | 1.13E-02 |
| 64 | GO:0006812: cation transport | 1.33E-02 |
| 65 | GO:0009846: pollen germination | 1.33E-02 |
| 66 | GO:0007275: multicellular organism development | 1.39E-02 |
| 67 | GO:0006364: rRNA processing | 1.40E-02 |
| 68 | GO:0009585: red, far-red light phototransduction | 1.40E-02 |
| 69 | GO:0006417: regulation of translation | 1.50E-02 |
| 70 | GO:0009553: embryo sac development | 1.76E-02 |
| 71 | GO:0006396: RNA processing | 1.83E-02 |
| 72 | GO:0000398: mRNA splicing, via spliceosome | 1.99E-02 |
| 73 | GO:0006414: translational elongation | 2.21E-02 |
| 74 | GO:0009845: seed germination | 2.23E-02 |
| 75 | GO:0009790: embryo development | 2.35E-02 |
| 76 | GO:0006633: fatty acid biosynthetic process | 2.47E-02 |
| 77 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.73E-02 |
| 78 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.87E-02 |
| 79 | GO:0009739: response to gibberellin | 2.87E-02 |
| 80 | GO:0009860: pollen tube growth | 3.81E-02 |
| 81 | GO:0048366: leaf development | 4.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 2.34E-17 |
| 2 | GO:0015288: porin activity | 1.84E-05 |
| 3 | GO:0003746: translation elongation factor activity | 3.90E-05 |
| 4 | GO:0000166: nucleotide binding | 4.15E-05 |
| 5 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 4.88E-05 |
| 6 | GO:0004828: serine-tRNA ligase activity | 4.88E-05 |
| 7 | GO:0004679: AMP-activated protein kinase activity | 4.88E-05 |
| 8 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 4.88E-05 |
| 9 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 4.88E-05 |
| 10 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 4.88E-05 |
| 11 | GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase | 4.88E-05 |
| 12 | GO:0005078: MAP-kinase scaffold activity | 1.20E-04 |
| 13 | GO:0004829: threonine-tRNA ligase activity | 1.20E-04 |
| 14 | GO:0050291: sphingosine N-acyltransferase activity | 1.20E-04 |
| 15 | GO:0032947: protein complex scaffold | 2.06E-04 |
| 16 | GO:0019843: rRNA binding | 2.07E-04 |
| 17 | GO:0003743: translation initiation factor activity | 3.90E-04 |
| 18 | GO:0045547: dehydrodolichyl diphosphate synthase activity | 5.13E-04 |
| 19 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.80E-04 |
| 20 | GO:0031369: translation initiation factor binding | 6.29E-04 |
| 21 | GO:0019887: protein kinase regulator activity | 7.50E-04 |
| 22 | GO:0008235: metalloexopeptidase activity | 8.75E-04 |
| 23 | GO:0008308: voltage-gated anion channel activity | 1.14E-03 |
| 24 | GO:0003678: DNA helicase activity | 1.28E-03 |
| 25 | GO:0001055: RNA polymerase II activity | 1.43E-03 |
| 26 | GO:0001054: RNA polymerase I activity | 1.75E-03 |
| 27 | GO:0044183: protein binding involved in protein folding | 1.75E-03 |
| 28 | GO:0001056: RNA polymerase III activity | 1.91E-03 |
| 29 | GO:0003729: mRNA binding | 2.00E-03 |
| 30 | GO:0003723: RNA binding | 2.01E-03 |
| 31 | GO:0015266: protein channel activity | 2.08E-03 |
| 32 | GO:0009982: pseudouridine synthase activity | 2.08E-03 |
| 33 | GO:0004407: histone deacetylase activity | 2.81E-03 |
| 34 | GO:0003714: transcription corepressor activity | 2.81E-03 |
| 35 | GO:0005216: ion channel activity | 3.01E-03 |
| 36 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 3.20E-03 |
| 37 | GO:0010181: FMN binding | 4.71E-03 |
| 38 | GO:0004004: ATP-dependent RNA helicase activity | 7.48E-03 |
| 39 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.04E-02 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.40E-02 |
| 41 | GO:0051082: unfolded protein binding | 1.79E-02 |
| 42 | GO:0016829: lyase activity | 2.23E-02 |
| 43 | GO:0005515: protein binding | 3.24E-02 |
| 44 | GO:0008233: peptidase activity | 4.16E-02 |
| 45 | GO:0004871: signal transducer activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0022626: cytosolic ribosome | 5.62E-17 |
| 3 | GO:0005829: cytosol | 3.10E-14 |
| 4 | GO:0005840: ribosome | 3.03E-13 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 2.24E-11 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 1.29E-10 |
| 7 | GO:0005730: nucleolus | 2.34E-09 |
| 8 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.95E-07 |
| 9 | GO:0046930: pore complex | 2.37E-05 |
| 10 | GO:0015934: large ribosomal subunit | 3.37E-05 |
| 11 | GO:0005737: cytoplasm | 6.54E-05 |
| 12 | GO:0005853: eukaryotic translation elongation factor 1 complex | 2.06E-04 |
| 13 | GO:0016020: membrane | 2.40E-04 |
| 14 | GO:0030529: intracellular ribonucleoprotein complex | 4.48E-04 |
| 15 | GO:0009506: plasmodesma | 5.05E-04 |
| 16 | GO:0016282: eukaryotic 43S preinitiation complex | 6.29E-04 |
| 17 | GO:0033290: eukaryotic 48S preinitiation complex | 7.50E-04 |
| 18 | GO:0031359: integral component of chloroplast outer membrane | 8.75E-04 |
| 19 | GO:0031595: nuclear proteasome complex | 8.75E-04 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 1.14E-03 |
| 21 | GO:0005736: DNA-directed RNA polymerase I complex | 1.28E-03 |
| 22 | GO:0008180: COP9 signalosome | 1.28E-03 |
| 23 | GO:0005666: DNA-directed RNA polymerase III complex | 1.43E-03 |
| 24 | GO:0015030: Cajal body | 1.43E-03 |
| 25 | GO:0005834: heterotrimeric G-protein complex | 1.54E-03 |
| 26 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.59E-03 |
| 27 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.75E-03 |
| 28 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.91E-03 |
| 29 | GO:0005618: cell wall | 2.19E-03 |
| 30 | GO:0005741: mitochondrial outer membrane | 3.20E-03 |
| 31 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.99E-03 |
| 32 | GO:0016592: mediator complex | 5.42E-03 |
| 33 | GO:0005774: vacuolar membrane | 7.20E-03 |
| 34 | GO:0005743: mitochondrial inner membrane | 7.73E-03 |
| 35 | GO:0005643: nuclear pore | 8.03E-03 |
| 36 | GO:0005886: plasma membrane | 9.43E-03 |
| 37 | GO:0090406: pollen tube | 1.13E-02 |
| 38 | GO:0000502: proteasome complex | 1.40E-02 |
| 39 | GO:0005635: nuclear envelope | 1.47E-02 |
| 40 | GO:0009706: chloroplast inner membrane | 1.79E-02 |
| 41 | GO:0005654: nucleoplasm | 2.06E-02 |
| 42 | GO:0005783: endoplasmic reticulum | 2.07E-02 |
| 43 | GO:0005622: intracellular | 2.63E-02 |
| 44 | GO:0005773: vacuole | 4.79E-02 |