co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G17880

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0046890: regulation of lipid biosynthetic process	0.00E+00
4	GO:0046487: glyoxylate metabolic process	0.00E+00
5	GO:0015833: peptide transport	0.00E+00
6	GO:0043171: peptide catabolic process	0.00E+00
7	GO:0010513: positive regulation of phosphatidylinositol biosynthetic process	0.00E+00
8	GO:0006511: ubiquitin-dependent protein catabolic process	1.78E-11
9	GO:0051603: proteolysis involved in cellular protein catabolic process	1.70E-07
10	GO:0009926: auxin polar transport	4.22E-05
11	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.56E-04
12	GO:0032365: intracellular lipid transport	1.56E-04
13	GO:0061014: positive regulation of mRNA catabolic process	1.56E-04
14	GO:0010265: SCF complex assembly	1.56E-04
15	GO:0010043: response to zinc ion	3.23E-04
16	GO:0055088: lipid homeostasis	3.55E-04
17	GO:0006212: uracil catabolic process	3.55E-04
18	GO:0051788: response to misfolded protein	3.55E-04
19	GO:0016560: protein import into peroxisome matrix, docking	3.55E-04
20	GO:0006435: threonyl-tRNA aminoacylation	3.55E-04
21	GO:0019483: beta-alanine biosynthetic process	3.55E-04
22	GO:0042939: tripeptide transport	3.55E-04
23	GO:0001736: establishment of planar polarity	3.55E-04
24	GO:2000028: regulation of photoperiodism, flowering	3.74E-04
25	GO:0045793: positive regulation of cell size	5.82E-04
26	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	5.82E-04
27	GO:0060145: viral gene silencing in virus induced gene silencing	5.82E-04
28	GO:0071494: cellular response to UV-C	5.82E-04
29	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	5.82E-04
30	GO:0046168: glycerol-3-phosphate catabolic process	5.82E-04
31	GO:0070919: production of siRNA involved in chromatin silencing by small RNA	5.82E-04
32	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	5.82E-04
33	GO:0046417: chorismate metabolic process	5.82E-04
34	GO:0006289: nucleotide-excision repair	5.84E-04
35	GO:0032877: positive regulation of DNA endoreduplication	8.33E-04
36	GO:0006072: glycerol-3-phosphate metabolic process	8.33E-04
37	GO:0035067: negative regulation of histone acetylation	8.33E-04
38	GO:0009647: skotomorphogenesis	8.33E-04
39	GO:0010587: miRNA catabolic process	8.33E-04
40	GO:1902290: positive regulation of defense response to oomycetes	8.33E-04
41	GO:0001676: long-chain fatty acid metabolic process	8.33E-04
42	GO:0001944: vasculature development	8.37E-04
43	GO:0051781: positive regulation of cell division	1.10E-03
44	GO:0010363: regulation of plant-type hypersensitive response	1.10E-03
45	GO:0006221: pyrimidine nucleotide biosynthetic process	1.10E-03
46	GO:0006625: protein targeting to peroxisome	1.10E-03
47	GO:0031507: heterochromatin assembly	1.10E-03
48	GO:0044205: 'de novo' UMP biosynthetic process	1.10E-03
49	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.10E-03
50	GO:0042938: dipeptide transport	1.10E-03
51	GO:0036065: fucosylation	1.40E-03
52	GO:2000762: regulation of phenylpropanoid metabolic process	1.40E-03
53	GO:0009630: gravitropism	1.48E-03
54	GO:0006914: autophagy	1.67E-03
55	GO:0006751: glutathione catabolic process	1.72E-03
56	GO:0043248: proteasome assembly	1.72E-03
57	GO:0006014: D-ribose metabolic process	1.72E-03
58	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.72E-03
59	GO:0010286: heat acclimation	1.78E-03
60	GO:0009554: megasporogenesis	2.06E-03
61	GO:0010555: response to mannitol	2.06E-03
62	GO:2000067: regulation of root morphogenesis	2.06E-03
63	GO:0009612: response to mechanical stimulus	2.06E-03
64	GO:0035196: production of miRNAs involved in gene silencing by miRNA	2.42E-03
65	GO:0032880: regulation of protein localization	2.42E-03
66	GO:0048528: post-embryonic root development	2.42E-03
67	GO:0070370: cellular heat acclimation	2.42E-03
68	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.42E-03
69	GO:0031540: regulation of anthocyanin biosynthetic process	2.80E-03
70	GO:0040029: regulation of gene expression, epigenetic	2.80E-03
71	GO:0006402: mRNA catabolic process	2.80E-03
72	GO:1900150: regulation of defense response to fungus	2.80E-03
73	GO:0000028: ribosomal small subunit assembly	2.80E-03
74	GO:0050821: protein stabilization	2.80E-03
75	GO:0009651: response to salt stress	2.84E-03
76	GO:0043562: cellular response to nitrogen levels	3.21E-03
77	GO:0007186: G-protein coupled receptor signaling pathway	3.21E-03
78	GO:0006526: arginine biosynthetic process	3.21E-03
79	GO:0098656: anion transmembrane transport	3.63E-03
80	GO:0009245: lipid A biosynthetic process	3.63E-03
81	GO:0080144: amino acid homeostasis	3.63E-03
82	GO:0034765: regulation of ion transmembrane transport	3.63E-03
83	GO:0006631: fatty acid metabolic process	3.88E-03
84	GO:0010267: production of ta-siRNAs involved in RNA interference	4.06E-03
85	GO:0010449: root meristem growth	4.06E-03
86	GO:0045036: protein targeting to chloroplast	4.52E-03
87	GO:0006325: chromatin organization	4.52E-03
88	GO:0016485: protein processing	4.99E-03
89	GO:0048229: gametophyte development	4.99E-03
90	GO:0048765: root hair cell differentiation	4.99E-03
91	GO:0030148: sphingolipid biosynthetic process	4.99E-03
92	GO:0009698: phenylpropanoid metabolic process	4.99E-03
93	GO:0052544: defense response by callose deposition in cell wall	4.99E-03
94	GO:0072593: reactive oxygen species metabolic process	4.99E-03
95	GO:0009073: aromatic amino acid family biosynthetic process	4.99E-03
96	GO:0009750: response to fructose	4.99E-03
97	GO:0006820: anion transport	5.48E-03
98	GO:0009736: cytokinin-activated signaling pathway	5.66E-03
99	GO:0009725: response to hormone	5.98E-03
100	GO:0006807: nitrogen compound metabolic process	5.98E-03
101	GO:0045454: cell redox homeostasis	6.48E-03
102	GO:0002237: response to molecule of bacterial origin	6.50E-03
103	GO:0046686: response to cadmium ion	6.82E-03
104	GO:0009969: xyloglucan biosynthetic process	7.04E-03
105	GO:0007031: peroxisome organization	7.04E-03
106	GO:0034976: response to endoplasmic reticulum stress	7.59E-03
107	GO:0009863: salicylic acid mediated signaling pathway	8.16E-03
108	GO:0009408: response to heat	8.46E-03
109	GO:0051726: regulation of cell cycle	8.55E-03
110	GO:0003333: amino acid transmembrane transport	9.34E-03
111	GO:0031348: negative regulation of defense response	9.96E-03
112	GO:0016226: iron-sulfur cluster assembly	9.96E-03
113	GO:0030433: ubiquitin-dependent ERAD pathway	9.96E-03
114	GO:0006012: galactose metabolic process	1.06E-02
115	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.19E-02
116	GO:0010051: xylem and phloem pattern formation	1.25E-02
117	GO:0042391: regulation of membrane potential	1.25E-02
118	GO:0000413: protein peptidyl-prolyl isomerization	1.25E-02
119	GO:0010182: sugar mediated signaling pathway	1.32E-02
120	GO:0006342: chromatin silencing	1.32E-02
121	GO:0009556: microsporogenesis	1.46E-02
122	GO:0009791: post-embryonic development	1.46E-02
123	GO:0010183: pollen tube guidance	1.46E-02
124	GO:0048825: cotyledon development	1.46E-02
125	GO:0009749: response to glucose	1.46E-02
126	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.54E-02
127	GO:0010193: response to ozone	1.54E-02
128	GO:0006635: fatty acid beta-oxidation	1.54E-02
129	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.56E-02
130	GO:0009735: response to cytokinin	1.57E-02
131	GO:0009617: response to bacterium	1.67E-02
132	GO:0030163: protein catabolic process	1.68E-02
133	GO:0071281: cellular response to iron ion	1.68E-02
134	GO:0015031: protein transport	1.70E-02
135	GO:0071805: potassium ion transmembrane transport	1.84E-02
136	GO:0051607: defense response to virus	1.92E-02
137	GO:0000910: cytokinesis	1.92E-02
138	GO:0051301: cell division	1.95E-02
139	GO:0009826: unidimensional cell growth	2.09E-02
140	GO:0009627: systemic acquired resistance	2.16E-02
141	GO:0006974: cellular response to DNA damage stimulus	2.16E-02
142	GO:0006950: response to stress	2.24E-02
143	GO:0016049: cell growth	2.32E-02
144	GO:0008219: cell death	2.41E-02
145	GO:0009817: defense response to fungus, incompatible interaction	2.41E-02
146	GO:0009832: plant-type cell wall biogenesis	2.50E-02
147	GO:0009723: response to ethylene	2.51E-02
148	GO:0006499: N-terminal protein myristoylation	2.58E-02
149	GO:0010119: regulation of stomatal movement	2.67E-02
150	GO:0045087: innate immune response	2.85E-02
151	GO:0009744: response to sucrose	3.42E-02
152	GO:0008283: cell proliferation	3.42E-02
153	GO:0009846: pollen germination	4.01E-02
154	GO:0042742: defense response to bacterium	4.22E-02
155	GO:0006486: protein glycosylation	4.22E-02
156	GO:0006813: potassium ion transport	4.22E-02
157	GO:0009909: regulation of flower development	4.54E-02
158	GO:0009733: response to auxin	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
2	GO:0008752: FMN reductase activity	0.00E+00
3	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
4	GO:0003837: beta-ureidopropionase activity	0.00E+00
5	GO:0015197: peptide transporter activity	0.00E+00
6	GO:0015334: high-affinity oligopeptide transporter activity	0.00E+00
7	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
8	GO:0004151: dihydroorotase activity	0.00E+00
9	GO:0008777: acetylornithine deacetylase activity	0.00E+00
10	GO:0004298: threonine-type endopeptidase activity	8.86E-22
11	GO:0008233: peptidase activity	4.88E-15
12	GO:0031593: polyubiquitin binding	4.69E-05
13	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	1.56E-04
14	GO:0016817: hydrolase activity, acting on acid anhydrides	1.56E-04
15	GO:0010013: N-1-naphthylphthalamic acid binding	1.56E-04
16	GO:0000824: inositol tetrakisphosphate 3-kinase activity	1.56E-04
17	GO:0047326: inositol tetrakisphosphate 5-kinase activity	1.56E-04
18	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	1.56E-04
19	GO:0070006: metalloaminopeptidase activity	1.56E-04
20	GO:0047560: 3-dehydrosphinganine reductase activity	1.56E-04
21	GO:0019786: Atg8-specific protease activity	1.56E-04
22	GO:0004177: aminopeptidase activity	2.86E-04
23	GO:0032934: sterol binding	3.55E-04
24	GO:0019779: Atg8 activating enzyme activity	3.55E-04
25	GO:1990585: hydroxyproline O-arabinosyltransferase activity	3.55E-04
26	GO:0004534: 5'-3' exoribonuclease activity	3.55E-04
27	GO:0004106: chorismate mutase activity	3.55E-04
28	GO:0004829: threonine-tRNA ligase activity	3.55E-04
29	GO:0042937: tripeptide transporter activity	3.55E-04
30	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	5.82E-04
31	GO:0052692: raffinose alpha-galactosidase activity	5.82E-04
32	GO:0001664: G-protein coupled receptor binding	5.82E-04
33	GO:0019003: GDP binding	5.82E-04
34	GO:0004557: alpha-galactosidase activity	5.82E-04
35	GO:0031683: G-protein beta/gamma-subunit complex binding	5.82E-04
36	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.82E-04
37	GO:0043130: ubiquitin binding	5.84E-04
38	GO:0010011: auxin binding	1.10E-03
39	GO:0008409: 5'-3' exonuclease activity	1.10E-03
40	GO:0042936: dipeptide transporter activity	1.10E-03
41	GO:0070628: proteasome binding	1.10E-03
42	GO:0019776: Atg8 ligase activity	1.10E-03
43	GO:0042277: peptide binding	1.10E-03
44	GO:0004888: transmembrane signaling receptor activity	1.40E-03
45	GO:0004040: amidase activity	1.40E-03
46	GO:0031177: phosphopantetheine binding	1.72E-03
47	GO:0036402: proteasome-activating ATPase activity	1.72E-03
48	GO:0008237: metallopeptidase activity	1.78E-03
49	GO:0005242: inward rectifier potassium channel activity	2.06E-03
50	GO:0102391: decanoate--CoA ligase activity	2.06E-03
51	GO:0004747: ribokinase activity	2.06E-03
52	GO:0000035: acyl binding	2.06E-03
53	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.06E-03
54	GO:0004467: long-chain fatty acid-CoA ligase activity	2.42E-03
55	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.42E-03
56	GO:0008235: metalloexopeptidase activity	2.42E-03
57	GO:0015288: porin activity	2.80E-03
58	GO:0035064: methylated histone binding	2.80E-03
59	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.80E-03
60	GO:0004034: aldose 1-epimerase activity	2.80E-03
61	GO:0008308: voltage-gated anion channel activity	3.21E-03
62	GO:0008417: fucosyltransferase activity	3.63E-03
63	GO:0008047: enzyme activator activity	4.52E-03
64	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.91E-03
65	GO:0004129: cytochrome-c oxidase activity	4.99E-03
66	GO:0008794: arsenate reductase (glutaredoxin) activity	4.99E-03
67	GO:0008327: methyl-CpG binding	4.99E-03
68	GO:0000976: transcription regulatory region sequence-specific DNA binding	5.48E-03
69	GO:0003725: double-stranded RNA binding	5.98E-03
70	GO:0004190: aspartic-type endopeptidase activity	7.04E-03
71	GO:0017025: TBP-class protein binding	7.04E-03
72	GO:0015035: protein disulfide oxidoreductase activity	8.30E-03
73	GO:0005515: protein binding	8.84E-03
74	GO:0009055: electron carrier activity	9.25E-03
75	GO:0003756: protein disulfide isomerase activity	1.12E-02
76	GO:0005102: receptor binding	1.19E-02
77	GO:0030551: cyclic nucleotide binding	1.25E-02
78	GO:0046872: metal ion binding	1.28E-02
79	GO:0010181: FMN binding	1.39E-02
80	GO:0004872: receptor activity	1.46E-02
81	GO:0003684: damaged DNA binding	1.76E-02
82	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.16E-02
83	GO:0004683: calmodulin-dependent protein kinase activity	2.24E-02
84	GO:0016757: transferase activity, transferring glycosyl groups	2.61E-02
85	GO:0050897: cobalt ion binding	2.67E-02
86	GO:0003993: acid phosphatase activity	2.94E-02
87	GO:0005525: GTP binding	3.27E-02
88	GO:0003735: structural constituent of ribosome	3.30E-02
89	GO:0051537: 2 iron, 2 sulfur cluster binding	3.61E-02
90	GO:0051287: NAD binding	3.91E-02
91	GO:0003924: GTPase activity	3.96E-02
92	GO:0015171: amino acid transmembrane transporter activity	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0005675: holo TFIIH complex	0.00E+00
2	GO:0000502: proteasome complex	2.02E-23
3	GO:0005839: proteasome core complex	8.86E-22
4	GO:0005829: cytosol	4.91E-13
5	GO:0019773: proteasome core complex, alpha-subunit complex	8.31E-11
6	GO:0005774: vacuolar membrane	1.40E-05
7	GO:0005776: autophagosome	1.93E-05
8	GO:0005773: vacuole	7.89E-05
9	GO:1990429: peroxisomal importomer complex	1.56E-04
10	GO:0022626: cytosolic ribosome	1.67E-04
11	GO:0000439: core TFIIH complex	5.82E-04
12	GO:0046861: glyoxysomal membrane	5.82E-04
13	GO:0031410: cytoplasmic vesicle	7.69E-04
14	GO:0005775: vacuolar lumen	8.33E-04
15	GO:0009331: glycerol-3-phosphate dehydrogenase complex	8.33E-04
16	GO:0005844: polysome	1.10E-03
17	GO:0005746: mitochondrial respiratory chain	1.40E-03
18	GO:0005801: cis-Golgi network	2.06E-03
19	GO:0031597: cytosolic proteasome complex	2.06E-03
20	GO:0009705: plant-type vacuole membrane	2.26E-03
21	GO:0031595: nuclear proteasome complex	2.42E-03
22	GO:0000421: autophagosome membrane	2.80E-03
23	GO:0046930: pore complex	3.21E-03
24	GO:0009514: glyoxysome	3.21E-03
25	GO:0005677: chromatin silencing complex	3.21E-03
26	GO:0005763: mitochondrial small ribosomal subunit	3.63E-03
27	GO:0010494: cytoplasmic stress granule	3.63E-03
28	GO:0031090: organelle membrane	3.63E-03
29	GO:0008540: proteasome regulatory particle, base subcomplex	4.06E-03
30	GO:0005737: cytoplasm	4.46E-03
31	GO:0008541: proteasome regulatory particle, lid subcomplex	4.99E-03
32	GO:0005777: peroxisome	5.03E-03
33	GO:0005783: endoplasmic reticulum	5.12E-03
34	GO:0005886: plasma membrane	6.71E-03
35	GO:0005769: early endosome	7.59E-03
36	GO:0005802: trans-Golgi network	8.33E-03
37	GO:0070469: respiratory chain	8.74E-03
38	GO:0005741: mitochondrial outer membrane	9.34E-03
39	GO:0005759: mitochondrial matrix	1.27E-02
40	GO:0000785: chromatin	1.61E-02
41	GO:0032580: Golgi cisterna membrane	1.76E-02
42	GO:0005778: peroxisomal membrane	1.84E-02
43	GO:0000932: P-body	1.99E-02
44	GO:0005788: endoplasmic reticulum lumen	2.07E-02
45	GO:0005789: endoplasmic reticulum membrane	2.24E-02
46	GO:0009707: chloroplast outer membrane	2.41E-02
47	GO:0015934: large ribosomal subunit	2.67E-02
48	GO:0000325: plant-type vacuole	2.67E-02
49	GO:0005819: spindle	3.04E-02
50	GO:0090406: pollen tube	3.42E-02
51	GO:0005768: endosome	3.71E-02
52	GO:0005794: Golgi apparatus	4.30E-02
53	GO:0005840: ribosome	4.47E-02
54	GO:0005834: heterotrimeric G-protein complex	4.97E-02