Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G17820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071345: cellular response to cytokine stimulus0.00E+00
2GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
3GO:0019477: L-lysine catabolic process0.00E+00
4GO:0046177: D-gluconate catabolic process0.00E+00
5GO:0006073: cellular glucan metabolic process0.00E+00
6GO:0010299: detoxification of cobalt ion0.00E+00
7GO:0009856: pollination0.00E+00
8GO:0010312: detoxification of zinc ion0.00E+00
9GO:0009722: detection of cytokinin stimulus0.00E+00
10GO:0006593: ornithine catabolic process0.00E+00
11GO:0019762: glucosinolate catabolic process9.20E-06
12GO:0010189: vitamin E biosynthetic process3.53E-05
13GO:0010597: green leaf volatile biosynthetic process1.06E-04
14GO:0006560: proline metabolic process1.06E-04
15GO:1903409: reactive oxygen species biosynthetic process1.06E-04
16GO:0009852: auxin catabolic process1.06E-04
17GO:0015812: gamma-aminobutyric acid transport1.06E-04
18GO:0019544: arginine catabolic process to glutamate1.06E-04
19GO:0006148: inosine catabolic process1.06E-04
20GO:0000305: response to oxygen radical1.06E-04
21GO:0009684: indoleacetic acid biosynthetic process1.65E-04
22GO:0002213: defense response to insect1.91E-04
23GO:0009725: response to hormone2.19E-04
24GO:0009915: phloem sucrose loading2.48E-04
25GO:0032527: protein exit from endoplasmic reticulum2.48E-04
26GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine2.48E-04
27GO:0010133: proline catabolic process to glutamate2.48E-04
28GO:2000379: positive regulation of reactive oxygen species metabolic process2.48E-04
29GO:0009833: plant-type primary cell wall biogenesis3.14E-04
30GO:0009611: response to wounding3.67E-04
31GO:0006591: ornithine metabolic process4.12E-04
32GO:0051646: mitochondrion localization4.12E-04
33GO:0045493: xylan catabolic process4.12E-04
34GO:0015692: lead ion transport4.12E-04
35GO:0055114: oxidation-reduction process5.53E-04
36GO:0006572: tyrosine catabolic process5.92E-04
37GO:1902476: chloride transmembrane transport5.92E-04
38GO:0005975: carbohydrate metabolic process6.34E-04
39GO:0000271: polysaccharide biosynthetic process6.38E-04
40GO:0006749: glutathione metabolic process7.86E-04
41GO:0061088: regulation of sequestering of zinc ion7.86E-04
42GO:0006646: phosphatidylethanolamine biosynthetic process7.86E-04
43GO:0051781: positive regulation of cell division7.86E-04
44GO:0009697: salicylic acid biosynthetic process9.92E-04
45GO:0007029: endoplasmic reticulum organization9.92E-04
46GO:0042732: D-xylose metabolic process1.21E-03
47GO:0006828: manganese ion transport1.21E-03
48GO:0002238: response to molecule of fungal origin1.21E-03
49GO:0006561: proline biosynthetic process1.21E-03
50GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.21E-03
51GO:0015691: cadmium ion transport1.21E-03
52GO:0071555: cell wall organization1.23E-03
53GO:0009816: defense response to bacterium, incompatible interaction1.26E-03
54GO:0010411: xyloglucan metabolic process1.40E-03
55GO:0010019: chloroplast-nucleus signaling pathway1.45E-03
56GO:0030244: cellulose biosynthetic process1.54E-03
57GO:0019745: pentacyclic triterpenoid biosynthetic process1.70E-03
58GO:0008272: sulfate transport1.70E-03
59GO:0006821: chloride transport1.70E-03
60GO:0010043: response to zinc ion1.78E-03
61GO:0009061: anaerobic respiration1.97E-03
62GO:0010439: regulation of glucosinolate biosynthetic process1.97E-03
63GO:0006875: cellular metal ion homeostasis1.97E-03
64GO:0006099: tricarboxylic acid cycle2.03E-03
65GO:0030001: metal ion transport2.21E-03
66GO:0015996: chlorophyll catabolic process2.24E-03
67GO:0006098: pentose-phosphate shunt2.53E-03
68GO:0046916: cellular transition metal ion homeostasis2.53E-03
69GO:0042546: cell wall biogenesis2.60E-03
70GO:0009636: response to toxic substance2.80E-03
71GO:0048354: mucilage biosynthetic process involved in seed coat development2.84E-03
72GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process2.84E-03
73GO:0009651: response to salt stress3.03E-03
74GO:0009970: cellular response to sulfate starvation3.15E-03
75GO:0010192: mucilage biosynthetic process3.15E-03
76GO:0072593: reactive oxygen species metabolic process3.47E-03
77GO:0006790: sulfur compound metabolic process3.81E-03
78GO:0012501: programmed cell death3.81E-03
79GO:0071365: cellular response to auxin stimulus3.81E-03
80GO:0016042: lipid catabolic process4.15E-03
81GO:0006829: zinc II ion transport4.16E-03
82GO:0010102: lateral root morphogenesis4.16E-03
83GO:0006807: nitrogen compound metabolic process4.16E-03
84GO:0006108: malate metabolic process4.16E-03
85GO:0002237: response to molecule of bacterial origin4.52E-03
86GO:0009266: response to temperature stimulus4.52E-03
87GO:0046854: phosphatidylinositol phosphorylation4.88E-03
88GO:0042753: positive regulation of circadian rhythm5.26E-03
89GO:0006636: unsaturated fatty acid biosynthetic process5.26E-03
90GO:0009058: biosynthetic process6.26E-03
91GO:0006366: transcription from RNA polymerase II promoter6.46E-03
92GO:0048511: rhythmic process6.46E-03
93GO:0016226: iron-sulfur cluster assembly6.87E-03
94GO:0019748: secondary metabolic process6.87E-03
95GO:0009625: response to insect7.30E-03
96GO:0010150: leaf senescence8.20E-03
97GO:0048653: anther development8.64E-03
98GO:0042335: cuticle development8.64E-03
99GO:0010087: phloem or xylem histogenesis8.64E-03
100GO:0010154: fruit development9.10E-03
101GO:0006662: glycerol ether metabolic process9.10E-03
102GO:0009617: response to bacterium9.79E-03
103GO:0008654: phospholipid biosynthetic process1.01E-02
104GO:0055072: iron ion homeostasis1.01E-02
105GO:0046686: response to cadmium ion1.04E-02
106GO:0071554: cell wall organization or biogenesis1.06E-02
107GO:0019761: glucosinolate biosynthetic process1.11E-02
108GO:0030163: protein catabolic process1.16E-02
109GO:0016125: sterol metabolic process1.21E-02
110GO:0010252: auxin homeostasis1.21E-02
111GO:0009627: systemic acquired resistance1.48E-02
112GO:0048573: photoperiodism, flowering1.54E-02
113GO:0008219: cell death1.65E-02
114GO:0009813: flavonoid biosynthetic process1.71E-02
115GO:0010311: lateral root formation1.71E-02
116GO:0009407: toxin catabolic process1.77E-02
117GO:0010119: regulation of stomatal movement1.83E-02
118GO:0045454: cell redox homeostasis1.89E-02
119GO:0034599: cellular response to oxidative stress2.02E-02
120GO:0042742: defense response to bacterium2.18E-02
121GO:0006631: fatty acid metabolic process2.21E-02
122GO:0042542: response to hydrogen peroxide2.27E-02
123GO:0051707: response to other organism2.34E-02
124GO:0006855: drug transmembrane transport2.61E-02
125GO:0031347: regulation of defense response2.68E-02
126GO:0042538: hyperosmotic salinity response2.75E-02
127GO:0006508: proteolysis2.85E-02
128GO:0051603: proteolysis involved in cellular protein catabolic process2.97E-02
129GO:0009626: plant-type hypersensitive response3.41E-02
130GO:0009624: response to nematode3.72E-02
RankGO TermAdjusted P value
1GO:0102165: (Z)-3-hexen-1-ol acetyltransferase activity0.00E+00
2GO:0047130: saccharopine dehydrogenase (NADP+, L-lysine-forming) activity0.00E+00
3GO:0009045: xylose isomerase activity0.00E+00
4GO:0080150: S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity0.00E+00
5GO:0000250: lanosterol synthase activity0.00E+00
6GO:0046316: gluconokinase activity0.00E+00
7GO:0047131: saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity0.00E+00
8GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
9GO:0010327: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity0.00E+00
10GO:0032441: pheophorbide a oxygenase activity0.00E+00
11GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity0.00E+00
12GO:0010176: homogentisate phytyltransferase activity0.00E+00
13GO:0080109: indole-3-acetonitrile nitrile hydratase activity0.00E+00
14GO:0004753: saccharopine dehydrogenase activity0.00E+00
15GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
16GO:0080061: indole-3-acetonitrile nitrilase activity2.05E-09
17GO:0000257: nitrilase activity1.00E-08
18GO:0046872: metal ion binding1.10E-05
19GO:0015103: inorganic anion transmembrane transporter activity4.78E-05
20GO:0051213: dioxygenase activity8.61E-05
21GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity9.74E-05
22GO:0001530: lipopolysaccharide binding1.06E-04
23GO:0016780: phosphotransferase activity, for other substituted phosphate groups1.06E-04
24GO:0070401: NADP+ binding1.06E-04
25GO:0009671: nitrate:proton symporter activity1.06E-04
26GO:0045437: uridine nucleosidase activity1.06E-04
27GO:0016624: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor1.06E-04
28GO:0004307: ethanolaminephosphotransferase activity1.06E-04
29GO:0015185: gamma-aminobutyric acid transmembrane transporter activity1.06E-04
30GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor1.06E-04
31GO:0052624: 2-phytyl-1,4-naphthoquinone methyltransferase activity1.06E-04
32GO:0016229: steroid dehydrogenase activity1.06E-04
33GO:0016798: hydrolase activity, acting on glycosyl bonds1.10E-04
34GO:0030572: phosphatidyltransferase activity2.48E-04
35GO:0004142: diacylglycerol cholinephosphotransferase activity2.48E-04
36GO:0047517: 1,4-beta-D-xylan synthase activity2.48E-04
37GO:0004362: glutathione-disulfide reductase activity2.48E-04
38GO:0004566: beta-glucuronidase activity2.48E-04
39GO:0004047: aminomethyltransferase activity2.48E-04
40GO:0047724: inosine nucleosidase activity2.48E-04
41GO:0004867: serine-type endopeptidase inhibitor activity2.81E-04
42GO:0016788: hydrolase activity, acting on ester bonds3.10E-04
43GO:0016298: lipase activity3.93E-04
44GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity4.12E-04
45GO:0010277: chlorophyllide a oxygenase [overall] activity4.12E-04
46GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity4.12E-04
47GO:0016760: cellulose synthase (UDP-forming) activity5.04E-04
48GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds5.83E-04
49GO:0080032: methyl jasmonate esterase activity7.86E-04
50GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds7.86E-04
51GO:0016866: intramolecular transferase activity7.86E-04
52GO:0009044: xylan 1,4-beta-xylosidase activity7.86E-04
53GO:0050302: indole-3-acetaldehyde oxidase activity7.86E-04
54GO:0005253: anion channel activity7.86E-04
55GO:0004301: epoxide hydrolase activity7.86E-04
56GO:0004659: prenyltransferase activity7.86E-04
57GO:0016762: xyloglucan:xyloglucosyl transferase activity8.40E-04
58GO:0030170: pyridoxal phosphate binding8.88E-04
59GO:0000104: succinate dehydrogenase activity9.92E-04
60GO:0008177: succinate dehydrogenase (ubiquinone) activity9.92E-04
61GO:0016759: cellulose synthase activity1.01E-03
62GO:0015562: efflux transmembrane transporter activity1.21E-03
63GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.21E-03
64GO:0004462: lactoylglutathione lyase activity1.21E-03
65GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.21E-03
66GO:0016615: malate dehydrogenase activity1.21E-03
67GO:0004866: endopeptidase inhibitor activity1.21E-03
68GO:0005247: voltage-gated chloride channel activity1.21E-03
69GO:0080030: methyl indole-3-acetate esterase activity1.21E-03
70GO:0102483: scopolin beta-glucosidase activity1.40E-03
71GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.45E-03
72GO:0030060: L-malate dehydrogenase activity1.45E-03
73GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.45E-03
74GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.94E-03
75GO:0004033: aldo-keto reductase (NADP) activity1.97E-03
76GO:0008422: beta-glucosidase activity2.12E-03
77GO:0008271: secondary active sulfate transmembrane transporter activity2.24E-03
78GO:0046914: transition metal ion binding2.24E-03
79GO:0016740: transferase activity2.45E-03
80GO:0005384: manganese ion transmembrane transporter activity2.84E-03
81GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity2.84E-03
82GO:0052689: carboxylic ester hydrolase activity2.98E-03
83GO:0015116: sulfate transmembrane transporter activity3.81E-03
84GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.08E-03
85GO:0004190: aspartic-type endopeptidase activity4.88E-03
86GO:0001046: core promoter sequence-specific DNA binding5.65E-03
87GO:0051536: iron-sulfur cluster binding5.65E-03
88GO:0005385: zinc ion transmembrane transporter activity5.65E-03
89GO:0008324: cation transmembrane transporter activity6.05E-03
90GO:0035251: UDP-glucosyltransferase activity6.46E-03
91GO:0004252: serine-type endopeptidase activity6.59E-03
92GO:0047134: protein-disulfide reductase activity8.19E-03
93GO:0008080: N-acetyltransferase activity9.10E-03
94GO:0046873: metal ion transmembrane transporter activity9.10E-03
95GO:0004791: thioredoxin-disulfide reductase activity9.58E-03
96GO:0004197: cysteine-type endopeptidase activity1.11E-02
97GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.16E-02
98GO:0008270: zinc ion binding1.20E-02
99GO:0008483: transaminase activity1.26E-02
100GO:0016413: O-acetyltransferase activity1.31E-02
101GO:0005507: copper ion binding1.40E-02
102GO:0050660: flavin adenine dinucleotide binding1.47E-02
103GO:0004806: triglyceride lipase activity1.54E-02
104GO:0004497: monooxygenase activity1.58E-02
105GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.59E-02
106GO:0015238: drug transmembrane transporter activity1.71E-02
107GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.83E-02
108GO:0050897: cobalt ion binding1.83E-02
109GO:0050661: NADP binding2.14E-02
110GO:0004364: glutathione transferase activity2.27E-02
111GO:0004185: serine-type carboxypeptidase activity2.34E-02
112GO:0051537: 2 iron, 2 sulfur cluster binding2.47E-02
113GO:0009055: electron carrier activity2.50E-02
114GO:0015293: symporter activity2.54E-02
115GO:0008234: cysteine-type peptidase activity3.11E-02
116GO:0022857: transmembrane transporter activity3.56E-02
117GO:0015035: protein disulfide oxidoreductase activity3.80E-02
118GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.45E-02
RankGO TermAdjusted P value
1GO:0005759: mitochondrial matrix3.68E-07
2GO:0005578: proteinaceous extracellular matrix2.19E-04
3GO:0048046: apoplast2.85E-04
4GO:0009705: plant-type vacuole membrane1.16E-03
5GO:0010168: ER body1.21E-03
6GO:0034707: chloride channel complex1.21E-03
7GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.97E-03
8GO:0045273: respiratory chain complex II1.97E-03
9GO:0005576: extracellular region2.90E-03
10GO:0005765: lysosomal membrane3.47E-03
11GO:0031012: extracellular matrix4.16E-03
12GO:0005764: lysosome4.52E-03
13GO:0005737: cytoplasm4.85E-03
14GO:0005615: extracellular space9.17E-03
15GO:0005777: peroxisome1.06E-02
16GO:0005618: cell wall1.36E-02
17GO:0019005: SCF ubiquitin ligase complex1.65E-02
18GO:0005773: vacuole2.23E-02
19GO:0031966: mitochondrial membrane2.75E-02
20GO:0009505: plant-type cell wall2.89E-02
21GO:0005794: Golgi apparatus3.13E-02
22GO:0009706: chloroplast inner membrane3.72E-02
23GO:0009506: plasmodesma4.18E-02
24GO:0005829: cytosol4.39E-02
25GO:0005623: cell4.45E-02
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Gene type



Gene DE type