GO Enrichment Analysis of Co-expressed Genes with
AT3G17330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0098586: cellular response to virus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:0009304: tRNA transcription | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 5.85E-05 |
| 8 | GO:0009767: photosynthetic electron transport chain | 1.40E-04 |
| 9 | GO:0009658: chloroplast organization | 1.48E-04 |
| 10 | GO:0009644: response to high light intensity | 1.58E-04 |
| 11 | GO:0019253: reductive pentose-phosphate cycle | 1.60E-04 |
| 12 | GO:0046741: transport of virus in host, tissue to tissue | 1.85E-04 |
| 13 | GO:0006435: threonyl-tRNA aminoacylation | 1.85E-04 |
| 14 | GO:0080005: photosystem stoichiometry adjustment | 1.85E-04 |
| 15 | GO:0048314: embryo sac morphogenesis | 1.85E-04 |
| 16 | GO:0050688: regulation of defense response to virus | 1.85E-04 |
| 17 | GO:0030187: melatonin biosynthetic process | 1.85E-04 |
| 18 | GO:0009405: pathogenesis | 3.11E-04 |
| 19 | GO:0002230: positive regulation of defense response to virus by host | 3.11E-04 |
| 20 | GO:1901672: positive regulation of systemic acquired resistance | 3.11E-04 |
| 21 | GO:0046739: transport of virus in multicellular host | 4.49E-04 |
| 22 | GO:0043572: plastid fission | 4.49E-04 |
| 23 | GO:0071484: cellular response to light intensity | 4.49E-04 |
| 24 | GO:0031935: regulation of chromatin silencing | 5.98E-04 |
| 25 | GO:0009616: virus induced gene silencing | 7.57E-04 |
| 26 | GO:0034052: positive regulation of plant-type hypersensitive response | 7.57E-04 |
| 27 | GO:0006656: phosphatidylcholine biosynthetic process | 7.57E-04 |
| 28 | GO:0043097: pyrimidine nucleoside salvage | 7.57E-04 |
| 29 | GO:0010117: photoprotection | 7.57E-04 |
| 30 | GO:0045038: protein import into chloroplast thylakoid membrane | 7.57E-04 |
| 31 | GO:0006282: regulation of DNA repair | 7.57E-04 |
| 32 | GO:0051607: defense response to virus | 7.57E-04 |
| 33 | GO:0006206: pyrimidine nucleobase metabolic process | 9.24E-04 |
| 34 | GO:0000741: karyogamy | 9.24E-04 |
| 35 | GO:0009643: photosynthetic acclimation | 9.24E-04 |
| 36 | GO:0050665: hydrogen peroxide biosynthetic process | 9.24E-04 |
| 37 | GO:0055114: oxidation-reduction process | 9.39E-04 |
| 38 | GO:0018298: protein-chromophore linkage | 1.03E-03 |
| 39 | GO:0010189: vitamin E biosynthetic process | 1.10E-03 |
| 40 | GO:0009854: oxidative photosynthetic carbon pathway | 1.10E-03 |
| 41 | GO:0048528: post-embryonic root development | 1.29E-03 |
| 42 | GO:0009853: photorespiration | 1.29E-03 |
| 43 | GO:1900056: negative regulation of leaf senescence | 1.29E-03 |
| 44 | GO:0010050: vegetative phase change | 1.29E-03 |
| 45 | GO:0009642: response to light intensity | 1.48E-03 |
| 46 | GO:0010114: response to red light | 1.65E-03 |
| 47 | GO:0009657: plastid organization | 1.69E-03 |
| 48 | GO:0015979: photosynthesis | 1.82E-03 |
| 49 | GO:0009821: alkaloid biosynthetic process | 1.91E-03 |
| 50 | GO:0000373: Group II intron splicing | 1.91E-03 |
| 51 | GO:0009098: leucine biosynthetic process | 2.14E-03 |
| 52 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.14E-03 |
| 53 | GO:0010267: production of ta-siRNAs involved in RNA interference | 2.14E-03 |
| 54 | GO:1900426: positive regulation of defense response to bacterium | 2.14E-03 |
| 55 | GO:0006949: syncytium formation | 2.37E-03 |
| 56 | GO:0009773: photosynthetic electron transport in photosystem I | 2.61E-03 |
| 57 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.61E-03 |
| 58 | GO:0009553: embryo sac development | 3.03E-03 |
| 59 | GO:0009725: response to hormone | 3.12E-03 |
| 60 | GO:0010020: chloroplast fission | 3.38E-03 |
| 61 | GO:0010025: wax biosynthetic process | 3.94E-03 |
| 62 | GO:0006863: purine nucleobase transport | 3.94E-03 |
| 63 | GO:0009058: biosynthetic process | 4.11E-03 |
| 64 | GO:0009863: salicylic acid mediated signaling pathway | 4.23E-03 |
| 65 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.52E-03 |
| 66 | GO:0051302: regulation of cell division | 4.52E-03 |
| 67 | GO:0009735: response to cytokinin | 4.64E-03 |
| 68 | GO:0051321: meiotic cell cycle | 4.82E-03 |
| 69 | GO:0009416: response to light stimulus | 5.19E-03 |
| 70 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.45E-03 |
| 71 | GO:0010197: polar nucleus fusion | 6.78E-03 |
| 72 | GO:0048868: pollen tube development | 6.78E-03 |
| 73 | GO:0008654: phospholipid biosynthetic process | 7.49E-03 |
| 74 | GO:0010193: response to ozone | 7.85E-03 |
| 75 | GO:0000302: response to reactive oxygen species | 7.85E-03 |
| 76 | GO:0031047: gene silencing by RNA | 8.22E-03 |
| 77 | GO:0016032: viral process | 8.22E-03 |
| 78 | GO:0019761: glucosinolate biosynthetic process | 8.22E-03 |
| 79 | GO:0009828: plant-type cell wall loosening | 8.97E-03 |
| 80 | GO:0009793: embryo development ending in seed dormancy | 9.86E-03 |
| 81 | GO:0009816: defense response to bacterium, incompatible interaction | 1.06E-02 |
| 82 | GO:0006811: ion transport | 1.31E-02 |
| 83 | GO:0010218: response to far red light | 1.31E-02 |
| 84 | GO:0007568: aging | 1.36E-02 |
| 85 | GO:0009910: negative regulation of flower development | 1.36E-02 |
| 86 | GO:0000724: double-strand break repair via homologous recombination | 1.40E-02 |
| 87 | GO:0009637: response to blue light | 1.45E-02 |
| 88 | GO:0009744: response to sucrose | 1.73E-02 |
| 89 | GO:0031347: regulation of defense response | 1.98E-02 |
| 90 | GO:0009664: plant-type cell wall organization | 2.04E-02 |
| 91 | GO:0006364: rRNA processing | 2.14E-02 |
| 92 | GO:0010224: response to UV-B | 2.19E-02 |
| 93 | GO:0006417: regulation of translation | 2.30E-02 |
| 94 | GO:0006096: glycolytic process | 2.41E-02 |
| 95 | GO:0009626: plant-type hypersensitive response | 2.52E-02 |
| 96 | GO:0016569: covalent chromatin modification | 2.64E-02 |
| 97 | GO:0006396: RNA processing | 2.81E-02 |
| 98 | GO:0009742: brassinosteroid mediated signaling pathway | 2.87E-02 |
| 99 | GO:0045893: positive regulation of transcription, DNA-templated | 3.11E-02 |
| 100 | GO:0009790: embryo development | 3.61E-02 |
| 101 | GO:0007623: circadian rhythm | 4.06E-02 |
| 102 | GO:0009451: RNA modification | 4.13E-02 |
| 103 | GO:0010468: regulation of gene expression | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 2 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 3 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 4 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 5 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 6 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 7 | GO:0004829: threonine-tRNA ligase activity | 1.85E-04 |
| 8 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.85E-04 |
| 9 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 1.85E-04 |
| 10 | GO:0004618: phosphoglycerate kinase activity | 1.85E-04 |
| 11 | GO:0016491: oxidoreductase activity | 1.89E-04 |
| 12 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.11E-04 |
| 13 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.11E-04 |
| 14 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 4.49E-04 |
| 15 | GO:0016851: magnesium chelatase activity | 4.49E-04 |
| 16 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 4.49E-04 |
| 17 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 4.49E-04 |
| 18 | GO:0008453: alanine-glyoxylate transaminase activity | 5.98E-04 |
| 19 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 5.98E-04 |
| 20 | GO:0008891: glycolate oxidase activity | 5.98E-04 |
| 21 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 7.57E-04 |
| 22 | GO:0016168: chlorophyll binding | 8.43E-04 |
| 23 | GO:0000293: ferric-chelate reductase activity | 9.24E-04 |
| 24 | GO:0004605: phosphatidate cytidylyltransferase activity | 9.24E-04 |
| 25 | GO:0004849: uridine kinase activity | 1.10E-03 |
| 26 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.78E-03 |
| 27 | GO:0045309: protein phosphorylated amino acid binding | 2.14E-03 |
| 28 | GO:0016844: strictosidine synthase activity | 2.14E-03 |
| 29 | GO:0019904: protein domain specific binding | 2.61E-03 |
| 30 | GO:0001054: RNA polymerase I activity | 2.61E-03 |
| 31 | GO:0009055: electron carrier activity | 2.75E-03 |
| 32 | GO:0001056: RNA polymerase III activity | 2.86E-03 |
| 33 | GO:0031409: pigment binding | 3.94E-03 |
| 34 | GO:0005345: purine nucleobase transmembrane transporter activity | 4.52E-03 |
| 35 | GO:0022891: substrate-specific transmembrane transporter activity | 5.45E-03 |
| 36 | GO:0003727: single-stranded RNA binding | 5.77E-03 |
| 37 | GO:0008080: N-acetyltransferase activity | 6.78E-03 |
| 38 | GO:0010181: FMN binding | 7.13E-03 |
| 39 | GO:0004872: receptor activity | 7.49E-03 |
| 40 | GO:0048038: quinone binding | 7.85E-03 |
| 41 | GO:0008483: transaminase activity | 9.36E-03 |
| 42 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.18E-02 |
| 43 | GO:0050897: cobalt ion binding | 1.36E-02 |
| 44 | GO:0004519: endonuclease activity | 1.66E-02 |
| 45 | GO:0043621: protein self-association | 1.83E-02 |
| 46 | GO:0051287: NAD binding | 1.98E-02 |
| 47 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-02 |
| 48 | GO:0031625: ubiquitin protein ligase binding | 2.30E-02 |
| 49 | GO:0016887: ATPase activity | 2.37E-02 |
| 50 | GO:0016746: transferase activity, transferring acyl groups | 2.81E-02 |
| 51 | GO:0019843: rRNA binding | 3.23E-02 |
| 52 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.29E-02 |
| 53 | GO:0016829: lyase activity | 3.42E-02 |
| 54 | GO:0005507: copper ion binding | 3.85E-02 |
| 55 | GO:0042802: identical protein binding | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.42E-22 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 6.34E-11 |
| 3 | GO:0009570: chloroplast stroma | 3.76E-08 |
| 4 | GO:0009706: chloroplast inner membrane | 2.35E-05 |
| 5 | GO:0009534: chloroplast thylakoid | 2.71E-05 |
| 6 | GO:0009941: chloroplast envelope | 3.35E-05 |
| 7 | GO:0080085: signal recognition particle, chloroplast targeting | 1.85E-04 |
| 8 | GO:0010007: magnesium chelatase complex | 3.11E-04 |
| 9 | GO:0009523: photosystem II | 5.25E-04 |
| 10 | GO:0005655: nucleolar ribonuclease P complex | 1.10E-03 |
| 11 | GO:0009579: thylakoid | 1.24E-03 |
| 12 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.69E-03 |
| 13 | GO:0005736: DNA-directed RNA polymerase I complex | 1.91E-03 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.91E-03 |
| 15 | GO:0005666: DNA-directed RNA polymerase III complex | 2.14E-03 |
| 16 | GO:0048471: perinuclear region of cytoplasm | 2.61E-03 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 2.69E-03 |
| 18 | GO:0009508: plastid chromosome | 3.12E-03 |
| 19 | GO:0030095: chloroplast photosystem II | 3.38E-03 |
| 20 | GO:0010287: plastoglobule | 3.70E-03 |
| 21 | GO:0009505: plant-type cell wall | 3.89E-03 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 3.90E-03 |
| 23 | GO:0042651: thylakoid membrane | 4.52E-03 |
| 24 | GO:0045271: respiratory chain complex I | 4.52E-03 |
| 25 | GO:0009522: photosystem I | 7.13E-03 |
| 26 | GO:0009295: nucleoid | 9.36E-03 |
| 27 | GO:0010319: stromule | 9.36E-03 |
| 28 | GO:0031969: chloroplast membrane | 1.03E-02 |
| 29 | GO:0009707: chloroplast outer membrane | 1.22E-02 |
| 30 | GO:0031977: thylakoid lumen | 1.64E-02 |
| 31 | GO:0048046: apoplast | 1.95E-02 |
| 32 | GO:0031966: mitochondrial membrane | 2.04E-02 |
| 33 | GO:0016020: membrane | 2.52E-02 |
| 34 | GO:0005777: peroxisome | 3.11E-02 |
| 35 | GO:0005623: cell | 3.29E-02 |
| 36 | GO:0005759: mitochondrial matrix | 3.80E-02 |