GO Enrichment Analysis of Co-expressed Genes with
AT3G16840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901181: negative regulation of cellular response to caffeine | 4.26E-06 |
| 2 | GO:0080009: mRNA methylation | 1.18E-05 |
| 3 | GO:0009793: embryo development ending in seed dormancy | 2.29E-05 |
| 4 | GO:0032465: regulation of cytokinesis | 3.41E-05 |
| 5 | GO:0045723: positive regulation of fatty acid biosynthetic process | 4.83E-05 |
| 6 | GO:0006417: regulation of translation | 6.42E-05 |
| 7 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.94E-05 |
| 8 | GO:0009880: embryonic pattern specification | 1.60E-04 |
| 9 | GO:0006349: regulation of gene expression by genetic imprinting | 2.05E-04 |
| 10 | GO:0008285: negative regulation of cell proliferation | 2.53E-04 |
| 11 | GO:0007005: mitochondrion organization | 4.91E-04 |
| 12 | GO:0010501: RNA secondary structure unwinding | 6.08E-04 |
| 13 | GO:0009960: endosperm development | 6.38E-04 |
| 14 | GO:0007264: small GTPase mediated signal transduction | 7.62E-04 |
| 15 | GO:0006364: rRNA processing | 1.83E-03 |
| 16 | GO:0009790: embryo development | 3.00E-03 |
| 17 | GO:0006413: translational initiation | 3.20E-03 |
| 18 | GO:0009451: RNA modification | 3.41E-03 |
| 19 | GO:0042254: ribosome biogenesis | 4.58E-03 |
| 20 | GO:0009860: pollen tube growth | 4.75E-03 |
| 21 | GO:0045892: negative regulation of transcription, DNA-templated | 5.99E-03 |
| 22 | GO:0009751: response to salicylic acid | 6.78E-03 |
| 23 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 8.33E-03 |
| 24 | GO:0051301: cell division | 1.09E-02 |
| 25 | GO:0045893: positive regulation of transcription, DNA-templated | 1.13E-02 |
| 26 | GO:0030154: cell differentiation | 1.79E-02 |
| 27 | GO:0006351: transcription, DNA-templated | 2.02E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003723: RNA binding | 1.72E-08 |
| 2 | GO:0001054: RNA polymerase I activity | 1.20E-06 |
| 3 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 4.26E-06 |
| 4 | GO:0003713: transcription coactivator activity | 7.72E-06 |
| 5 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.71E-05 |
| 6 | GO:0008026: ATP-dependent helicase activity | 9.11E-05 |
| 7 | GO:0030515: snoRNA binding | 1.19E-04 |
| 8 | GO:0031490: chromatin DNA binding | 2.05E-04 |
| 9 | GO:0004004: ATP-dependent RNA helicase activity | 1.03E-03 |
| 10 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.06E-03 |
| 11 | GO:0003729: mRNA binding | 2.24E-03 |
| 12 | GO:0003743: translation initiation factor activity | 3.73E-03 |
| 13 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 5.93E-03 |
| 14 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 6.38E-03 |
| 15 | GO:0003924: GTPase activity | 6.85E-03 |
| 16 | GO:0004519: endonuclease activity | 7.26E-03 |
| 17 | GO:0005524: ATP binding | 7.97E-03 |
| 18 | GO:0000166: nucleotide binding | 1.02E-02 |
| 19 | GO:0005525: GTP binding | 1.45E-02 |
| 20 | GO:0005509: calcium ion binding | 1.59E-02 |
| 21 | GO:0044212: transcription regulatory region DNA binding | 1.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036396: MIS complex | 0.00E+00 |
| 2 | GO:0005736: DNA-directed RNA polymerase I complex | 6.25E-07 |
| 3 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 4.26E-06 |
| 4 | GO:0031307: integral component of mitochondrial outer membrane | 2.77E-04 |
| 5 | GO:0032040: small-subunit processome | 2.77E-04 |
| 6 | GO:0005634: nucleus | 3.76E-04 |
| 7 | GO:0016607: nuclear speck | 2.10E-03 |
| 8 | GO:0005730: nucleolus | 2.54E-03 |