GO Enrichment Analysis of Co-expressed Genes with
AT3G16370
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 2 | GO:0000025: maltose catabolic process | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0005980: glycogen catabolic process | 0.00E+00 |
| 5 | GO:0010378: temperature compensation of the circadian clock | 0.00E+00 |
| 6 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 7 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 8 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 9 | GO:0009735: response to cytokinin | 9.84E-09 |
| 10 | GO:0005983: starch catabolic process | 4.14E-07 |
| 11 | GO:0010025: wax biosynthetic process | 1.29E-06 |
| 12 | GO:0009409: response to cold | 1.61E-05 |
| 13 | GO:0010143: cutin biosynthetic process | 3.55E-05 |
| 14 | GO:0009631: cold acclimation | 5.93E-05 |
| 15 | GO:0009913: epidermal cell differentiation | 8.60E-05 |
| 16 | GO:0007623: circadian rhythm | 1.20E-04 |
| 17 | GO:0042335: cuticle development | 1.52E-04 |
| 18 | GO:0000023: maltose metabolic process | 2.27E-04 |
| 19 | GO:0043489: RNA stabilization | 2.27E-04 |
| 20 | GO:0044262: cellular carbohydrate metabolic process | 2.27E-04 |
| 21 | GO:0032958: inositol phosphate biosynthetic process | 2.27E-04 |
| 22 | GO:0080051: cutin transport | 2.27E-04 |
| 23 | GO:0032544: plastid translation | 2.48E-04 |
| 24 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.56E-04 |
| 25 | GO:0005982: starch metabolic process | 3.56E-04 |
| 26 | GO:0006412: translation | 4.76E-04 |
| 27 | GO:0000038: very long-chain fatty acid metabolic process | 4.83E-04 |
| 28 | GO:0015908: fatty acid transport | 5.05E-04 |
| 29 | GO:0010115: regulation of abscisic acid biosynthetic process | 5.05E-04 |
| 30 | GO:0005976: polysaccharide metabolic process | 5.05E-04 |
| 31 | GO:1901959: positive regulation of cutin biosynthetic process | 5.05E-04 |
| 32 | GO:0010353: response to trehalose | 5.05E-04 |
| 33 | GO:0009817: defense response to fungus, incompatible interaction | 5.28E-04 |
| 34 | GO:0006633: fatty acid biosynthetic process | 6.88E-04 |
| 35 | GO:0009266: response to temperature stimulus | 7.06E-04 |
| 36 | GO:1904278: positive regulation of wax biosynthetic process | 8.21E-04 |
| 37 | GO:0010623: programmed cell death involved in cell development | 8.21E-04 |
| 38 | GO:0006081: cellular aldehyde metabolic process | 8.21E-04 |
| 39 | GO:0006289: nucleotide-excision repair | 9.67E-04 |
| 40 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.17E-03 |
| 41 | GO:0010731: protein glutathionylation | 1.17E-03 |
| 42 | GO:1902358: sulfate transmembrane transport | 1.17E-03 |
| 43 | GO:0010371: regulation of gibberellin biosynthetic process | 1.17E-03 |
| 44 | GO:0006020: inositol metabolic process | 1.17E-03 |
| 45 | GO:0010017: red or far-red light signaling pathway | 1.27E-03 |
| 46 | GO:0009809: lignin biosynthetic process | 1.41E-03 |
| 47 | GO:0010023: proanthocyanidin biosynthetic process | 1.56E-03 |
| 48 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.56E-03 |
| 49 | GO:0009765: photosynthesis, light harvesting | 1.56E-03 |
| 50 | GO:0045727: positive regulation of translation | 1.56E-03 |
| 51 | GO:0010600: regulation of auxin biosynthetic process | 1.56E-03 |
| 52 | GO:0045723: positive regulation of fatty acid biosynthetic process | 1.56E-03 |
| 53 | GO:0071585: detoxification of cadmium ion | 1.56E-03 |
| 54 | GO:2000122: negative regulation of stomatal complex development | 1.56E-03 |
| 55 | GO:0010508: positive regulation of autophagy | 1.56E-03 |
| 56 | GO:0010021: amylopectin biosynthetic process | 1.56E-03 |
| 57 | GO:0010037: response to carbon dioxide | 1.56E-03 |
| 58 | GO:0010222: stem vascular tissue pattern formation | 1.56E-03 |
| 59 | GO:0015976: carbon utilization | 1.56E-03 |
| 60 | GO:0042254: ribosome biogenesis | 1.57E-03 |
| 61 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 1.99E-03 |
| 62 | GO:0006544: glycine metabolic process | 1.99E-03 |
| 63 | GO:0019252: starch biosynthetic process | 2.18E-03 |
| 64 | GO:0000470: maturation of LSU-rRNA | 2.45E-03 |
| 65 | GO:0006563: L-serine metabolic process | 2.45E-03 |
| 66 | GO:0015979: photosynthesis | 2.59E-03 |
| 67 | GO:0009955: adaxial/abaxial pattern specification | 2.94E-03 |
| 68 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.94E-03 |
| 69 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.94E-03 |
| 70 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 2.94E-03 |
| 71 | GO:0008272: sulfate transport | 3.47E-03 |
| 72 | GO:0050829: defense response to Gram-negative bacterium | 3.47E-03 |
| 73 | GO:0009645: response to low light intensity stimulus | 3.47E-03 |
| 74 | GO:0010161: red light signaling pathway | 3.47E-03 |
| 75 | GO:0009610: response to symbiotic fungus | 3.47E-03 |
| 76 | GO:0019827: stem cell population maintenance | 4.02E-03 |
| 77 | GO:0010928: regulation of auxin mediated signaling pathway | 4.02E-03 |
| 78 | GO:0008610: lipid biosynthetic process | 4.02E-03 |
| 79 | GO:0005978: glycogen biosynthetic process | 4.02E-03 |
| 80 | GO:0009704: de-etiolation | 4.02E-03 |
| 81 | GO:0000160: phosphorelay signal transduction system | 4.60E-03 |
| 82 | GO:0010218: response to far red light | 4.82E-03 |
| 83 | GO:0006783: heme biosynthetic process | 5.22E-03 |
| 84 | GO:0009637: response to blue light | 5.54E-03 |
| 85 | GO:0035999: tetrahydrofolate interconversion | 5.85E-03 |
| 86 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.51E-03 |
| 87 | GO:0006949: syncytium formation | 6.51E-03 |
| 88 | GO:0010114: response to red light | 7.14E-03 |
| 89 | GO:0009773: photosynthetic electron transport in photosystem I | 7.20E-03 |
| 90 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.20E-03 |
| 91 | GO:0009644: response to high light intensity | 7.73E-03 |
| 92 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.92E-03 |
| 93 | GO:0071555: cell wall organization | 8.01E-03 |
| 94 | GO:0006979: response to oxidative stress | 8.12E-03 |
| 95 | GO:0010588: cotyledon vascular tissue pattern formation | 8.66E-03 |
| 96 | GO:0010102: lateral root morphogenesis | 8.66E-03 |
| 97 | GO:0006006: glucose metabolic process | 8.66E-03 |
| 98 | GO:0009718: anthocyanin-containing compound biosynthetic process | 8.66E-03 |
| 99 | GO:0009416: response to light stimulus | 9.16E-03 |
| 100 | GO:0019253: reductive pentose-phosphate cycle | 9.42E-03 |
| 101 | GO:0009887: animal organ morphogenesis | 9.42E-03 |
| 102 | GO:0009585: red, far-red light phototransduction | 9.64E-03 |
| 103 | GO:0080167: response to karrikin | 1.01E-02 |
| 104 | GO:0009737: response to abscisic acid | 1.02E-02 |
| 105 | GO:0000027: ribosomal large subunit assembly | 1.19E-02 |
| 106 | GO:0019953: sexual reproduction | 1.27E-02 |
| 107 | GO:0007017: microtubule-based process | 1.27E-02 |
| 108 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.27E-02 |
| 109 | GO:0010431: seed maturation | 1.36E-02 |
| 110 | GO:0006869: lipid transport | 1.43E-02 |
| 111 | GO:0030245: cellulose catabolic process | 1.45E-02 |
| 112 | GO:0035428: hexose transmembrane transport | 1.45E-02 |
| 113 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.54E-02 |
| 114 | GO:0006284: base-excision repair | 1.64E-02 |
| 115 | GO:0010089: xylem development | 1.64E-02 |
| 116 | GO:0046686: response to cadmium ion | 1.72E-02 |
| 117 | GO:0042631: cellular response to water deprivation | 1.83E-02 |
| 118 | GO:0000271: polysaccharide biosynthetic process | 1.83E-02 |
| 119 | GO:0008152: metabolic process | 1.88E-02 |
| 120 | GO:0045489: pectin biosynthetic process | 1.93E-02 |
| 121 | GO:0046323: glucose import | 1.93E-02 |
| 122 | GO:0015986: ATP synthesis coupled proton transport | 2.03E-02 |
| 123 | GO:0042752: regulation of circadian rhythm | 2.03E-02 |
| 124 | GO:0048825: cotyledon development | 2.14E-02 |
| 125 | GO:0000302: response to reactive oxygen species | 2.24E-02 |
| 126 | GO:0010090: trichome morphogenesis | 2.46E-02 |
| 127 | GO:0009828: plant-type cell wall loosening | 2.57E-02 |
| 128 | GO:0006310: DNA recombination | 2.57E-02 |
| 129 | GO:0009739: response to gibberellin | 2.67E-02 |
| 130 | GO:0006974: cellular response to DNA damage stimulus | 3.15E-02 |
| 131 | GO:0015995: chlorophyll biosynthetic process | 3.27E-02 |
| 132 | GO:0018298: protein-chromophore linkage | 3.52E-02 |
| 133 | GO:0009826: unidimensional cell growth | 3.55E-02 |
| 134 | GO:0055114: oxidation-reduction process | 3.66E-02 |
| 135 | GO:0016310: phosphorylation | 3.69E-02 |
| 136 | GO:0010119: regulation of stomatal movement | 3.90E-02 |
| 137 | GO:0006970: response to osmotic stress | 3.96E-02 |
| 138 | GO:0009853: photorespiration | 4.17E-02 |
| 139 | GO:0045087: innate immune response | 4.17E-02 |
| 140 | GO:0016051: carbohydrate biosynthetic process | 4.17E-02 |
| 141 | GO:0034599: cellular response to oxidative stress | 4.30E-02 |
| 142 | GO:0006631: fatty acid metabolic process | 4.71E-02 |
| 143 | GO:0005975: carbohydrate metabolic process | 4.82E-02 |
| 144 | GO:0042542: response to hydrogen peroxide | 4.85E-02 |
| 145 | GO:0051707: response to other organism | 4.98E-02 |
| 146 | GO:0008283: cell proliferation | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008184: glycogen phosphorylase activity | 0.00E+00 |
| 2 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0004134: 4-alpha-glucanotransferase activity | 0.00E+00 |
| 4 | GO:0004645: phosphorylase activity | 0.00E+00 |
| 5 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 6 | GO:0019843: rRNA binding | 4.14E-10 |
| 7 | GO:0008266: poly(U) RNA binding | 7.57E-07 |
| 8 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.94E-06 |
| 9 | GO:0003735: structural constituent of ribosome | 1.35E-05 |
| 10 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.34E-05 |
| 11 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.10E-05 |
| 12 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.10E-05 |
| 13 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.10E-05 |
| 14 | GO:2001070: starch binding | 8.60E-05 |
| 15 | GO:0000829: inositol heptakisphosphate kinase activity | 2.27E-04 |
| 16 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.27E-04 |
| 17 | GO:0050521: alpha-glucan, water dikinase activity | 2.27E-04 |
| 18 | GO:0000828: inositol hexakisphosphate kinase activity | 2.27E-04 |
| 19 | GO:0005534: galactose binding | 2.27E-04 |
| 20 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.27E-04 |
| 21 | GO:0004856: xylulokinase activity | 2.27E-04 |
| 22 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.27E-04 |
| 23 | GO:0019203: carbohydrate phosphatase activity | 2.27E-04 |
| 24 | GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity | 2.27E-04 |
| 25 | GO:0015245: fatty acid transporter activity | 2.27E-04 |
| 26 | GO:0033857: diphosphoinositol-pentakisphosphate kinase activity | 2.27E-04 |
| 27 | GO:0016746: transferase activity, transferring acyl groups | 3.57E-04 |
| 28 | GO:0033201: alpha-1,4-glucan synthase activity | 5.05E-04 |
| 29 | GO:0004750: ribulose-phosphate 3-epimerase activity | 5.05E-04 |
| 30 | GO:0018708: thiol S-methyltransferase activity | 5.05E-04 |
| 31 | GO:0004618: phosphoglycerate kinase activity | 5.05E-04 |
| 32 | GO:0010297: heteropolysaccharide binding | 5.05E-04 |
| 33 | GO:0004324: ferredoxin-NADP+ reductase activity | 8.21E-04 |
| 34 | GO:0070330: aromatase activity | 8.21E-04 |
| 35 | GO:0004373: glycogen (starch) synthase activity | 8.21E-04 |
| 36 | GO:0050734: hydroxycinnamoyltransferase activity | 8.21E-04 |
| 37 | GO:0017108: 5'-flap endonuclease activity | 8.21E-04 |
| 38 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 8.21E-04 |
| 39 | GO:0030267: glyoxylate reductase (NADP) activity | 8.21E-04 |
| 40 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 8.21E-04 |
| 41 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.13E-03 |
| 42 | GO:0019104: DNA N-glycosylase activity | 1.56E-03 |
| 43 | GO:0009011: starch synthase activity | 1.56E-03 |
| 44 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 1.56E-03 |
| 45 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.99E-03 |
| 46 | GO:0004372: glycine hydroxymethyltransferase activity | 1.99E-03 |
| 47 | GO:0003959: NADPH dehydrogenase activity | 1.99E-03 |
| 48 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.99E-03 |
| 49 | GO:0018685: alkane 1-monooxygenase activity | 1.99E-03 |
| 50 | GO:0004130: cytochrome-c peroxidase activity | 2.45E-03 |
| 51 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.45E-03 |
| 52 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 2.45E-03 |
| 53 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.45E-03 |
| 54 | GO:0000156: phosphorelay response regulator activity | 2.65E-03 |
| 55 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.94E-03 |
| 56 | GO:0004602: glutathione peroxidase activity | 2.94E-03 |
| 57 | GO:0030170: pyridoxal phosphate binding | 3.36E-03 |
| 58 | GO:0008271: secondary active sulfate transmembrane transporter activity | 4.60E-03 |
| 59 | GO:0015078: hydrogen ion transmembrane transporter activity | 4.60E-03 |
| 60 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 5.22E-03 |
| 61 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 5.85E-03 |
| 62 | GO:0008289: lipid binding | 6.33E-03 |
| 63 | GO:0004864: protein phosphatase inhibitor activity | 6.51E-03 |
| 64 | GO:0047372: acylglycerol lipase activity | 7.20E-03 |
| 65 | GO:0015116: sulfate transmembrane transporter activity | 7.92E-03 |
| 66 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 7.92E-03 |
| 67 | GO:0004565: beta-galactosidase activity | 8.66E-03 |
| 68 | GO:0004022: alcohol dehydrogenase (NAD) activity | 8.66E-03 |
| 69 | GO:0004089: carbonate dehydratase activity | 8.66E-03 |
| 70 | GO:0031409: pigment binding | 1.10E-02 |
| 71 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.18E-02 |
| 72 | GO:0005528: FK506 binding | 1.19E-02 |
| 73 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.45E-02 |
| 74 | GO:0008810: cellulase activity | 1.54E-02 |
| 75 | GO:0001085: RNA polymerase II transcription factor binding | 1.93E-02 |
| 76 | GO:0003713: transcription coactivator activity | 1.93E-02 |
| 77 | GO:0005355: glucose transmembrane transporter activity | 2.03E-02 |
| 78 | GO:0050662: coenzyme binding | 2.03E-02 |
| 79 | GO:0046910: pectinesterase inhibitor activity | 2.22E-02 |
| 80 | GO:0048038: quinone binding | 2.24E-02 |
| 81 | GO:0004518: nuclease activity | 2.35E-02 |
| 82 | GO:0003684: damaged DNA binding | 2.57E-02 |
| 83 | GO:0016791: phosphatase activity | 2.57E-02 |
| 84 | GO:0008237: metallopeptidase activity | 2.68E-02 |
| 85 | GO:0005200: structural constituent of cytoskeleton | 2.68E-02 |
| 86 | GO:0016787: hydrolase activity | 2.95E-02 |
| 87 | GO:0016168: chlorophyll binding | 3.03E-02 |
| 88 | GO:0030247: polysaccharide binding | 3.27E-02 |
| 89 | GO:0004222: metalloendopeptidase activity | 3.77E-02 |
| 90 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.90E-02 |
| 91 | GO:0008270: zinc ion binding | 4.20E-02 |
| 92 | GO:0003993: acid phosphatase activity | 4.30E-02 |
| 93 | GO:0016740: transferase activity | 4.36E-02 |
| 94 | GO:0004364: glutathione transferase activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0033557: Slx1-Slx4 complex | 0.00E+00 |
| 3 | GO:0009941: chloroplast envelope | 2.95E-27 |
| 4 | GO:0009570: chloroplast stroma | 4.00E-26 |
| 5 | GO:0009507: chloroplast | 1.42E-19 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 9.03E-13 |
| 7 | GO:0009534: chloroplast thylakoid | 1.02E-12 |
| 8 | GO:0009579: thylakoid | 1.54E-11 |
| 9 | GO:0010287: plastoglobule | 2.03E-07 |
| 10 | GO:0016020: membrane | 1.44E-05 |
| 11 | GO:0010319: stromule | 2.08E-05 |
| 12 | GO:0005840: ribosome | 1.85E-04 |
| 13 | GO:0009501: amyloplast | 2.00E-04 |
| 14 | GO:0048046: apoplast | 4.80E-04 |
| 15 | GO:0030093: chloroplast photosystem I | 5.05E-04 |
| 16 | GO:0043036: starch grain | 5.05E-04 |
| 17 | GO:0000311: plastid large ribosomal subunit | 5.53E-04 |
| 18 | GO:0009508: plastid chromosome | 6.27E-04 |
| 19 | GO:0009897: external side of plasma membrane | 8.21E-04 |
| 20 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 2.45E-03 |
| 21 | GO:0009295: nucleoid | 2.99E-03 |
| 22 | GO:0009538: photosystem I reaction center | 4.02E-03 |
| 23 | GO:0005618: cell wall | 4.83E-03 |
| 24 | GO:0042644: chloroplast nucleoid | 5.22E-03 |
| 25 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.22E-03 |
| 26 | GO:0045298: tubulin complex | 5.22E-03 |
| 27 | GO:0000312: plastid small ribosomal subunit | 9.42E-03 |
| 28 | GO:0030076: light-harvesting complex | 1.02E-02 |
| 29 | GO:0022625: cytosolic large ribosomal subunit | 1.08E-02 |
| 30 | GO:0009505: plant-type cell wall | 1.18E-02 |
| 31 | GO:0015935: small ribosomal subunit | 1.36E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 1.38E-02 |
| 33 | GO:0009543: chloroplast thylakoid lumen | 1.73E-02 |
| 34 | GO:0009522: photosystem I | 2.03E-02 |
| 35 | GO:0009523: photosystem II | 2.14E-02 |
| 36 | GO:0071944: cell periphery | 2.46E-02 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 2.91E-02 |
| 38 | GO:0005667: transcription factor complex | 3.15E-02 |
| 39 | GO:0022626: cytosolic ribosome | 3.23E-02 |
| 40 | GO:0015934: large ribosomal subunit | 3.90E-02 |
| 41 | GO:0005783: endoplasmic reticulum | 4.13E-02 |
| 42 | GO:0031969: chloroplast membrane | 4.56E-02 |
| 43 | GO:0031977: thylakoid lumen | 4.71E-02 |