GO Enrichment Analysis of Co-expressed Genes with
AT3G16190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036172: thiamine salvage | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 4 | GO:0071461: cellular response to redox state | 6.58E-05 |
| 5 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 6.58E-05 |
| 6 | GO:0016487: farnesol metabolic process | 6.58E-05 |
| 7 | GO:0080005: photosystem stoichiometry adjustment | 1.59E-04 |
| 8 | GO:1902000: homogentisate catabolic process | 1.59E-04 |
| 9 | GO:0016122: xanthophyll metabolic process | 1.59E-04 |
| 10 | GO:0009150: purine ribonucleotide metabolic process | 2.69E-04 |
| 11 | GO:0006696: ergosterol biosynthetic process | 2.69E-04 |
| 12 | GO:0009072: aromatic amino acid family metabolic process | 2.69E-04 |
| 13 | GO:0009399: nitrogen fixation | 3.90E-04 |
| 14 | GO:2001141: regulation of RNA biosynthetic process | 3.90E-04 |
| 15 | GO:0006572: tyrosine catabolic process | 3.90E-04 |
| 16 | GO:0006552: leucine catabolic process | 5.20E-04 |
| 17 | GO:0034613: cellular protein localization | 5.20E-04 |
| 18 | GO:0006542: glutamine biosynthetic process | 5.20E-04 |
| 19 | GO:0042274: ribosomal small subunit biogenesis | 5.20E-04 |
| 20 | GO:0010117: photoprotection | 6.60E-04 |
| 21 | GO:0009229: thiamine diphosphate biosynthetic process | 6.60E-04 |
| 22 | GO:0009228: thiamine biosynthetic process | 8.06E-04 |
| 23 | GO:0010190: cytochrome b6f complex assembly | 8.06E-04 |
| 24 | GO:0009117: nucleotide metabolic process | 8.06E-04 |
| 25 | GO:0006555: methionine metabolic process | 8.06E-04 |
| 26 | GO:0019509: L-methionine salvage from methylthioadenosine | 9.59E-04 |
| 27 | GO:0009704: de-etiolation | 1.29E-03 |
| 28 | GO:0048564: photosystem I assembly | 1.29E-03 |
| 29 | GO:0071482: cellular response to light stimulus | 1.47E-03 |
| 30 | GO:0009821: alkaloid biosynthetic process | 1.65E-03 |
| 31 | GO:0098656: anion transmembrane transport | 1.65E-03 |
| 32 | GO:0006535: cysteine biosynthetic process from serine | 2.05E-03 |
| 33 | GO:0000103: sulfate assimilation | 2.05E-03 |
| 34 | GO:0009688: abscisic acid biosynthetic process | 2.05E-03 |
| 35 | GO:0006352: DNA-templated transcription, initiation | 2.26E-03 |
| 36 | GO:0006790: sulfur compound metabolic process | 2.48E-03 |
| 37 | GO:0006508: proteolysis | 2.81E-03 |
| 38 | GO:0048440: carpel development | 2.93E-03 |
| 39 | GO:0009058: biosynthetic process | 3.32E-03 |
| 40 | GO:0000162: tryptophan biosynthetic process | 3.40E-03 |
| 41 | GO:0019344: cysteine biosynthetic process | 3.65E-03 |
| 42 | GO:0016226: iron-sulfur cluster assembly | 4.43E-03 |
| 43 | GO:0016117: carotenoid biosynthetic process | 5.26E-03 |
| 44 | GO:0008654: phospholipid biosynthetic process | 6.45E-03 |
| 45 | GO:0009851: auxin biosynthetic process | 6.45E-03 |
| 46 | GO:0009658: chloroplast organization | 6.69E-03 |
| 47 | GO:0030163: protein catabolic process | 7.40E-03 |
| 48 | GO:0016126: sterol biosynthetic process | 8.74E-03 |
| 49 | GO:0042128: nitrate assimilation | 9.44E-03 |
| 50 | GO:0055114: oxidation-reduction process | 9.69E-03 |
| 51 | GO:0006950: response to stress | 9.79E-03 |
| 52 | GO:0008219: cell death | 1.05E-02 |
| 53 | GO:0010043: response to zinc ion | 1.17E-02 |
| 54 | GO:0007568: aging | 1.17E-02 |
| 55 | GO:0009809: lignin biosynthetic process | 1.84E-02 |
| 56 | GO:0006417: regulation of translation | 1.98E-02 |
| 57 | GO:0006457: protein folding | 2.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 2 | GO:0004334: fumarylacetoacetase activity | 0.00E+00 |
| 3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 4 | GO:0047710: bis(5'-adenosyl)-triphosphatase activity | 0.00E+00 |
| 5 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 6 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 7 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 8 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 9 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 10 | GO:0043530: adenosine 5'-monophosphoramidase activity | 0.00E+00 |
| 11 | GO:0004848: ureidoglycolate hydrolase activity | 9.50E-07 |
| 12 | GO:0047627: adenylylsulfatase activity | 2.29E-06 |
| 13 | GO:0051996: squalene synthase activity | 6.58E-05 |
| 14 | GO:0016783: sulfurtransferase activity | 6.58E-05 |
| 15 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 6.58E-05 |
| 16 | GO:0004485: methylcrotonoyl-CoA carboxylase activity | 6.58E-05 |
| 17 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 6.58E-05 |
| 18 | GO:0016491: oxidoreductase activity | 1.14E-04 |
| 19 | GO:0004046: aminoacylase activity | 1.59E-04 |
| 20 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.59E-04 |
| 21 | GO:0032947: protein complex scaffold | 2.69E-04 |
| 22 | GO:0004075: biotin carboxylase activity | 2.69E-04 |
| 23 | GO:0004180: carboxypeptidase activity | 2.69E-04 |
| 24 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 2.69E-04 |
| 25 | GO:0004792: thiosulfate sulfurtransferase activity | 3.90E-04 |
| 26 | GO:0009001: serine O-acetyltransferase activity | 3.90E-04 |
| 27 | GO:0000254: C-4 methylsterol oxidase activity | 3.90E-04 |
| 28 | GO:0001053: plastid sigma factor activity | 5.20E-04 |
| 29 | GO:0004834: tryptophan synthase activity | 5.20E-04 |
| 30 | GO:0016987: sigma factor activity | 5.20E-04 |
| 31 | GO:0004356: glutamate-ammonia ligase activity | 6.60E-04 |
| 32 | GO:0016407: acetyltransferase activity | 6.60E-04 |
| 33 | GO:0004605: phosphatidate cytidylyltransferase activity | 8.06E-04 |
| 34 | GO:0016621: cinnamoyl-CoA reductase activity | 1.12E-03 |
| 35 | GO:0071949: FAD binding | 1.65E-03 |
| 36 | GO:0016844: strictosidine synthase activity | 1.85E-03 |
| 37 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.70E-03 |
| 38 | GO:0051536: iron-sulfur cluster binding | 3.65E-03 |
| 39 | GO:0005528: FK506 binding | 3.65E-03 |
| 40 | GO:0004176: ATP-dependent peptidase activity | 4.17E-03 |
| 41 | GO:0008514: organic anion transmembrane transporter activity | 4.98E-03 |
| 42 | GO:0050662: coenzyme binding | 6.15E-03 |
| 43 | GO:0048038: quinone binding | 6.76E-03 |
| 44 | GO:0008237: metallopeptidase activity | 8.06E-03 |
| 45 | GO:0008233: peptidase activity | 8.16E-03 |
| 46 | GO:0008236: serine-type peptidase activity | 1.02E-02 |
| 47 | GO:0004222: metalloendopeptidase activity | 1.13E-02 |
| 48 | GO:0050897: cobalt ion binding | 1.17E-02 |
| 49 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.24E-02 |
| 50 | GO:0005198: structural molecule activity | 1.62E-02 |
| 51 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.66E-02 |
| 52 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.84E-02 |
| 53 | GO:0016887: ATPase activity | 1.91E-02 |
| 54 | GO:0051082: unfolded protein binding | 2.36E-02 |
| 55 | GO:0016787: hydrolase activity | 2.53E-02 |
| 56 | GO:0004252: serine-type endopeptidase activity | 2.99E-02 |
| 57 | GO:0015144: carbohydrate transmembrane transporter activity | 3.15E-02 |
| 58 | GO:0005351: sugar:proton symporter activity | 3.43E-02 |
| 59 | GO:0005506: iron ion binding | 4.34E-02 |
| 60 | GO:0008168: methyltransferase activity | 4.63E-02 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 4.82E-02 |
| 62 | GO:0003824: catalytic activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.57E-06 |
| 2 | GO:0031969: chloroplast membrane | 1.47E-04 |
| 3 | GO:0009517: PSII associated light-harvesting complex II | 5.20E-04 |
| 4 | GO:0009840: chloroplastic endopeptidase Clp complex | 9.59E-04 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.65E-03 |
| 6 | GO:0042651: thylakoid membrane | 3.90E-03 |
| 7 | GO:0005759: mitochondrial matrix | 3.95E-03 |
| 8 | GO:0009532: plastid stroma | 4.17E-03 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 6.75E-03 |
| 10 | GO:0009570: chloroplast stroma | 1.06E-02 |
| 11 | GO:0031966: mitochondrial membrane | 1.75E-02 |
| 12 | GO:0005829: cytosol | 1.87E-02 |
| 13 | GO:0009941: chloroplast envelope | 2.06E-02 |
| 14 | GO:0016607: nuclear speck | 2.12E-02 |
| 15 | GO:0005773: vacuole | 2.47E-02 |
| 16 | GO:0005777: peroxisome | 2.51E-02 |
| 17 | GO:0010287: plastoglobule | 2.67E-02 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 2.77E-02 |